Protein–RNA interactions for Protein: O15020

SPTBN2, Spectrin beta chain, non-erythrocytic 2, humanhuman

Predictions only

Length 2,390 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN2O15020 AC116407.3-201ENST00000623905 1129 ntBASIC18.05■□□□□ 0.48
SPTBN2O15020 FAM215A-202ENST00000632077 792 ntBASIC18.05■□□□□ 0.48
SPTBN2O15020 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC18.05■□□□□ 0.48
SPTBN2O15020 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SPTBN2O15020 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC18.05■□□□□ 0.48
SPTBN2O15020 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
SPTBN2O15020 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
SPTBN2O15020 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
SPTBN2O15020 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
SPTBN2O15020 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SPTBN2O15020 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
SPTBN2O15020 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SPTBN2O15020 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
SPTBN2O15020 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SPTBN2O15020 KRT18P28-201ENST00000453838 1332 ntBASIC18.04■□□□□ 0.48
SPTBN2O15020 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
SPTBN2O15020 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
SPTBN2O15020 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC18.04■□□□□ 0.48
SPTBN2O15020 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SPTBN2O15020 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SPTBN2O15020 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SPTBN2O15020 NUS1P2-201ENST00000417358 873 ntBASIC18.04■□□□□ 0.48
SPTBN2O15020 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC18.04■□□□□ 0.48
SPTBN2O15020 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC18.04■□□□□ 0.48
SPTBN2O15020 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC18.04■□□□□ 0.48
SPTBN2O15020 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
SPTBN2O15020 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC18.04■□□□□ 0.48
SPTBN2O15020 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC18.04■□□□□ 0.48
SPTBN2O15020 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SPTBN2O15020 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC18.04■□□□□ 0.48
SPTBN2O15020 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
SPTBN2O15020 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
SPTBN2O15020 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC18.04■□□□□ 0.48
SPTBN2O15020 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC18.04■□□□□ 0.48
SPTBN2O15020 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
SPTBN2O15020 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SPTBN2O15020 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC18.04■□□□□ 0.48
SPTBN2O15020 AL591424.1-201ENST00000442569 1213 ntBASIC18.04■□□□□ 0.48
SPTBN2O15020 AC005332.3-201ENST00000589904 676 ntBASIC18.04■□□□□ 0.48
SPTBN2O15020 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC18.04■□□□□ 0.48
SPTBN2O15020 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
SPTBN2O15020 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC18.04■□□□□ 0.48
SPTBN2O15020 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
SPTBN2O15020 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
SPTBN2O15020 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SPTBN2O15020 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SPTBN2O15020 BUB3-202ENST00000368859 667 ntTSL 3 BASIC18.03■□□□□ 0.48
SPTBN2O15020 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SPTBN2O15020 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
SPTBN2O15020 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
SPTBN2O15020 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC18.03■□□□□ 0.48
SPTBN2O15020 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC18.03■□□□□ 0.48
SPTBN2O15020 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC18.03■□□□□ 0.48
SPTBN2O15020 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
SPTBN2O15020 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC18.03■□□□□ 0.48
SPTBN2O15020 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC18.03■□□□□ 0.48
SPTBN2O15020 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
SPTBN2O15020 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
SPTBN2O15020 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
SPTBN2O15020 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SPTBN2O15020 LHX6-205ENST00000464484 666 ntTSL 2 BASIC18.03■□□□□ 0.48
SPTBN2O15020 VENTXP7-201ENST00000475503 772 ntBASIC18.03■□□□□ 0.48
SPTBN2O15020 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
SPTBN2O15020 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC18.03■□□□□ 0.48
SPTBN2O15020 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC18.03■□□□□ 0.48
SPTBN2O15020 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
SPTBN2O15020 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
SPTBN2O15020 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SPTBN2O15020 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
SPTBN2O15020 Z98882.1-201ENST00000622160 2253 ntBASIC18.03■□□□□ 0.48
SPTBN2O15020 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
SPTBN2O15020 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
SPTBN2O15020 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC18.02■□□□□ 0.48
SPTBN2O15020 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC18.02■□□□□ 0.48
SPTBN2O15020 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
SPTBN2O15020 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
SPTBN2O15020 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC18.02■□□□□ 0.48
SPTBN2O15020 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC18.02■□□□□ 0.48
SPTBN2O15020 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC18.02■□□□□ 0.48
SPTBN2O15020 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC18.02■□□□□ 0.48
SPTBN2O15020 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
SPTBN2O15020 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
SPTBN2O15020 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
SPTBN2O15020 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC18.02■□□□□ 0.48
SPTBN2O15020 GALC-202ENST00000393568 2054 ntTSL 2 BASIC18.02■□□□□ 0.48
SPTBN2O15020 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC18.02■□□□□ 0.48
SPTBN2O15020 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
SPTBN2O15020 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.47
SPTBN2O15020 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
SPTBN2O15020 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
SPTBN2O15020 DDT-203ENST00000403754 569 ntTSL 3 BASIC18.02■□□□□ 0.47
SPTBN2O15020 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC18.02■□□□□ 0.47
SPTBN2O15020 AC034105.1-201ENST00000563488 319 ntBASIC18.02■□□□□ 0.47
SPTBN2O15020 PRR29-209ENST00000582540 967 ntTSL 2 BASIC18.02■□□□□ 0.47
SPTBN2O15020 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC18.02■□□□□ 0.47
SPTBN2O15020 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.47
SPTBN2O15020 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
SPTBN2O15020 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
SPTBN2O15020 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC18.02■□□□□ 0.47
SPTBN2O15020 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 73.3 ms