Protein–RNA interactions for Protein: O00453

LST1, Leukocyte-specific transcript 1 protein, humanhuman

Predictions only

Length 97 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LST1O00453 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
LST1O00453 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
LST1O00453 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
LST1O00453 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
LST1O00453 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
LST1O00453 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
LST1O00453 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
LST1O00453 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
LST1O00453 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
LST1O00453 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC12.35□□□□□ -0.43
LST1O00453 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC12.35□□□□□ -0.43
LST1O00453 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
LST1O00453 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
LST1O00453 SYT6-210ENST00000641643 1587 ntBASIC12.35□□□□□ -0.43
LST1O00453 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
LST1O00453 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
LST1O00453 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC12.34□□□□□ -0.43
LST1O00453 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC12.34□□□□□ -0.43
LST1O00453 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC12.34□□□□□ -0.43
LST1O00453 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC12.34□□□□□ -0.43
LST1O00453 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
LST1O00453 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
LST1O00453 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
LST1O00453 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC12.34□□□□□ -0.43
LST1O00453 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC12.34□□□□□ -0.43
LST1O00453 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
LST1O00453 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC12.34□□□□□ -0.43
LST1O00453 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
LST1O00453 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
LST1O00453 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
LST1O00453 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
LST1O00453 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC12.34□□□□□ -0.43
LST1O00453 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC12.34□□□□□ -0.43
LST1O00453 AC239859.2-201ENST00000444165 318 ntBASIC12.34□□□□□ -0.43
LST1O00453 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC12.34□□□□□ -0.43
LST1O00453 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC12.34□□□□□ -0.43
LST1O00453 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC12.34□□□□□ -0.43
LST1O00453 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
LST1O00453 AC099791.2-201ENST00000605725 427 ntBASIC12.34□□□□□ -0.43
LST1O00453 FAM21FP-204ENST00000608637 956 ntBASIC12.34□□□□□ -0.43
LST1O00453 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
LST1O00453 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
LST1O00453 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC12.34□□□□□ -0.43
LST1O00453 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC12.34□□□□□ -0.43
LST1O00453 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
LST1O00453 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC12.34□□□□□ -0.43
LST1O00453 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
LST1O00453 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
LST1O00453 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
LST1O00453 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
LST1O00453 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
LST1O00453 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
LST1O00453 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC12.34□□□□□ -0.43
LST1O00453 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
LST1O00453 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
LST1O00453 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
LST1O00453 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC12.34□□□□□ -0.43
LST1O00453 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC12.33□□□□□ -0.43
LST1O00453 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.43
LST1O00453 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.43
LST1O00453 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
LST1O00453 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
LST1O00453 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
LST1O00453 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
LST1O00453 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
LST1O00453 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
LST1O00453 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
LST1O00453 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
LST1O00453 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
LST1O00453 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC12.33□□□□□ -0.44
LST1O00453 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC12.33□□□□□ -0.44
LST1O00453 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC12.33□□□□□ -0.44
LST1O00453 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
LST1O00453 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
LST1O00453 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
LST1O00453 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
LST1O00453 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC12.33□□□□□ -0.44
LST1O00453 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
LST1O00453 POU5F1P4-201ENST00000413175 1085 ntBASIC12.33□□□□□ -0.44
LST1O00453 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC12.33□□□□□ -0.44
LST1O00453 MIR6724-1-201ENST00000616420 92 ntBASIC12.33□□□□□ -0.44
LST1O00453 MIR6724-2-201ENST00000616483 92 ntBASIC12.33□□□□□ -0.44
LST1O00453 MIR6724-4-201ENST00000617390 92 ntBASIC12.33□□□□□ -0.44
LST1O00453 MIR6724-3-201ENST00000622482 92 ntBASIC12.33□□□□□ -0.44
LST1O00453 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
LST1O00453 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
LST1O00453 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
LST1O00453 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
LST1O00453 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
LST1O00453 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
LST1O00453 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
LST1O00453 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
LST1O00453 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
LST1O00453 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC12.33□□□□□ -0.44
LST1O00453 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC12.33□□□□□ -0.44
LST1O00453 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
LST1O00453 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
LST1O00453 NARF-204ENST00000390006 1766 ntTSL 2 BASIC12.33□□□□□ -0.44
LST1O00453 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
LST1O00453 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC12.33□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms