Protein–RNA interactions for Protein: O00311

CDC7, Cell division cycle 7-related protein kinase, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC7O00311 AC083906.6-201ENST00000641366 219 ntBASIC18.62■□□□□ 0.57
CDC7O00311 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC18.62■□□□□ 0.57
CDC7O00311 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
CDC7O00311 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
CDC7O00311 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC18.62■□□□□ 0.57
CDC7O00311 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
CDC7O00311 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC18.62■□□□□ 0.57
CDC7O00311 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
CDC7O00311 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CDC7O00311 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
CDC7O00311 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CDC7O00311 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CDC7O00311 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC18.62■□□□□ 0.57
CDC7O00311 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CDC7O00311 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CDC7O00311 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CDC7O00311 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
CDC7O00311 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CDC7O00311 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CDC7O00311 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC18.61■□□□□ 0.57
CDC7O00311 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC18.61■□□□□ 0.57
CDC7O00311 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CDC7O00311 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
CDC7O00311 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CDC7O00311 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC18.61■□□□□ 0.57
CDC7O00311 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC18.61■□□□□ 0.57
CDC7O00311 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CDC7O00311 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CDC7O00311 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
CDC7O00311 RCC2P6-201ENST00000526625 1557 ntBASIC18.61■□□□□ 0.57
CDC7O00311 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
CDC7O00311 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC18.61■□□□□ 0.57
CDC7O00311 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CDC7O00311 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC18.61■□□□□ 0.57
CDC7O00311 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CDC7O00311 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC18.61■□□□□ 0.57
CDC7O00311 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CDC7O00311 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC18.61■□□□□ 0.57
CDC7O00311 AC091390.4-202ENST00000476426 537 ntBASIC18.61■□□□□ 0.57
CDC7O00311 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CDC7O00311 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CDC7O00311 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC18.61■□□□□ 0.57
CDC7O00311 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC18.61■□□□□ 0.57
CDC7O00311 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
CDC7O00311 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CDC7O00311 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CDC7O00311 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CDC7O00311 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
CDC7O00311 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CDC7O00311 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
CDC7O00311 WIZP1-201ENST00000531444 2299 ntBASIC18.61■□□□□ 0.57
CDC7O00311 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
CDC7O00311 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC18.6■□□□□ 0.57
CDC7O00311 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CDC7O00311 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC18.6■□□□□ 0.57
CDC7O00311 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CDC7O00311 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
CDC7O00311 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC18.6■□□□□ 0.57
CDC7O00311 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CDC7O00311 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
CDC7O00311 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CDC7O00311 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CDC7O00311 KRT16P1-201ENST00000399124 1418 ntBASIC18.6■□□□□ 0.57
CDC7O00311 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC18.6■□□□□ 0.57
CDC7O00311 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CDC7O00311 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CDC7O00311 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC18.6■□□□□ 0.57
CDC7O00311 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CDC7O00311 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CDC7O00311 DERL1-203ENST00000419562 918 ntTSL 2 BASIC18.6■□□□□ 0.57
CDC7O00311 AL353807.1-201ENST00000427475 662 ntBASIC18.6■□□□□ 0.57
CDC7O00311 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC18.6■□□□□ 0.57
CDC7O00311 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CDC7O00311 RARRES2P10-201ENST00000564312 460 ntBASIC18.6■□□□□ 0.57
CDC7O00311 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
CDC7O00311 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC18.6■□□□□ 0.57
CDC7O00311 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC18.6■□□□□ 0.57
CDC7O00311 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CDC7O00311 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CDC7O00311 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
CDC7O00311 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CDC7O00311 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CDC7O00311 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CDC7O00311 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CDC7O00311 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC18.6■□□□□ 0.57
CDC7O00311 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC18.6■□□□□ 0.57
CDC7O00311 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC18.59■□□□□ 0.57
CDC7O00311 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
CDC7O00311 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC18.59■□□□□ 0.57
CDC7O00311 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC18.59■□□□□ 0.57
CDC7O00311 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
CDC7O00311 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CDC7O00311 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
CDC7O00311 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC18.59■□□□□ 0.57
CDC7O00311 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC18.59■□□□□ 0.57
CDC7O00311 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC18.59■□□□□ 0.57
CDC7O00311 AC008040.2-201ENST00000461049 708 ntBASIC18.59■□□□□ 0.57
CDC7O00311 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC18.59■□□□□ 0.57
CDC7O00311 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
CDC7O00311 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC18.59■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms