Protein–RNA interactions for Protein: O00268

TAF4, Transcription initiation factor TFIID subunit 4, humanhuman

Predictions only

Length 1,085 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TAF4O00268 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC18.56■□□□□ 0.56
TAF4O00268 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC18.56■□□□□ 0.56
TAF4O00268 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TAF4O00268 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
TAF4O00268 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
TAF4O00268 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
TAF4O00268 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
TAF4O00268 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC18.56■□□□□ 0.56
TAF4O00268 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC18.56■□□□□ 0.56
TAF4O00268 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
TAF4O00268 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC18.56■□□□□ 0.56
TAF4O00268 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TAF4O00268 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
TAF4O00268 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC18.56■□□□□ 0.56
TAF4O00268 AC092338.2-201ENST00000568827 1415 ntBASIC18.56■□□□□ 0.56
TAF4O00268 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TAF4O00268 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TAF4O00268 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TAF4O00268 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC18.56■□□□□ 0.56
TAF4O00268 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
TAF4O00268 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TAF4O00268 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC18.55■□□□□ 0.56
TAF4O00268 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
TAF4O00268 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TAF4O00268 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
TAF4O00268 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
TAF4O00268 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TAF4O00268 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
TAF4O00268 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TAF4O00268 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TAF4O00268 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TAF4O00268 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
TAF4O00268 SLC25A1P2-201ENST00000430693 912 ntBASIC18.55■□□□□ 0.56
TAF4O00268 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC18.55■□□□□ 0.56
TAF4O00268 UNC93B7-201ENST00000509439 705 ntBASIC18.55■□□□□ 0.56
TAF4O00268 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC18.55■□□□□ 0.56
TAF4O00268 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
TAF4O00268 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC18.55■□□□□ 0.56
TAF4O00268 AC140113.3-201ENST00000605663 199 ntBASIC18.55■□□□□ 0.56
TAF4O00268 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
TAF4O00268 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
TAF4O00268 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
TAF4O00268 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TAF4O00268 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC18.55■□□□□ 0.56
TAF4O00268 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TAF4O00268 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
TAF4O00268 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TAF4O00268 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
TAF4O00268 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
TAF4O00268 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
TAF4O00268 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC18.54■□□□□ 0.56
TAF4O00268 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TAF4O00268 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TAF4O00268 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
TAF4O00268 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TAF4O00268 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
TAF4O00268 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TAF4O00268 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
TAF4O00268 AC004870.1-201ENST00000315132 882 ntBASIC18.54■□□□□ 0.56
TAF4O00268 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TAF4O00268 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
TAF4O00268 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
TAF4O00268 MFAP1P1-201ENST00000442257 1255 ntBASIC18.54■□□□□ 0.56
TAF4O00268 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC18.54■□□□□ 0.56
TAF4O00268 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC18.54■□□□□ 0.56
TAF4O00268 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC18.54■□□□□ 0.56
TAF4O00268 PRR29-207ENST00000580752 458 ntTSL 3 BASIC18.54■□□□□ 0.56
TAF4O00268 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC18.54■□□□□ 0.56
TAF4O00268 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
TAF4O00268 AC008622.2-201ENST00000617006 1229 ntBASIC18.54■□□□□ 0.56
TAF4O00268 BCL10-202ENST00000620248 774 ntTSL 5 BASIC18.54■□□□□ 0.56
TAF4O00268 AC131212.4-201ENST00000623606 975 ntBASIC18.54■□□□□ 0.56
TAF4O00268 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC18.54■□□□□ 0.56
TAF4O00268 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC18.54■□□□□ 0.56
TAF4O00268 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
TAF4O00268 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TAF4O00268 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
TAF4O00268 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
TAF4O00268 USP39-204ENST00000409766 2033 ntTSL 2 BASIC18.54■□□□□ 0.56
TAF4O00268 TNXA-203ENST00000507684 2038 ntBASIC18.54■□□□□ 0.56
TAF4O00268 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TAF4O00268 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
TAF4O00268 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TAF4O00268 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
TAF4O00268 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
TAF4O00268 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC18.53■□□□□ 0.56
TAF4O00268 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC18.53■□□□□ 0.56
TAF4O00268 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
TAF4O00268 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
TAF4O00268 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TAF4O00268 AC020907.5-201ENST00000624372 1936 ntBASIC18.53■□□□□ 0.56
TAF4O00268 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TAF4O00268 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TAF4O00268 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
TAF4O00268 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC18.53■□□□□ 0.56
TAF4O00268 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TAF4O00268 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC18.53■□□□□ 0.56
TAF4O00268 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC18.53■□□□□ 0.56
TAF4O00268 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TAF4O00268 ETFA-216ENST00000560726 942 ntTSL 3 BASIC18.53■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 19.3 ms