Protein–RNA interactions for Protein: O00206

TLR4, Toll-like receptor 4, humanhuman

Predictions only

Length 839 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TLR4O00206 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TLR4O00206 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TLR4O00206 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC18.79■□□□□ 0.6
TLR4O00206 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
TLR4O00206 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC18.79■□□□□ 0.6
TLR4O00206 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TLR4O00206 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
TLR4O00206 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TLR4O00206 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
TLR4O00206 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC18.79■□□□□ 0.6
TLR4O00206 KRT18P56-201ENST00000507275 550 ntBASIC18.79■□□□□ 0.6
TLR4O00206 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC18.79■□□□□ 0.6
TLR4O00206 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC18.79■□□□□ 0.6
TLR4O00206 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
TLR4O00206 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC18.79■□□□□ 0.6
TLR4O00206 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC18.79■□□□□ 0.6
TLR4O00206 ZNF815P-204ENST00000434898 1737 ntBASIC18.79■□□□□ 0.6
TLR4O00206 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
TLR4O00206 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
TLR4O00206 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TLR4O00206 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TLR4O00206 RNF165-205ENST00000588679 2904 ntBASIC18.79■□□□□ 0.6
TLR4O00206 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TLR4O00206 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC18.78■□□□□ 0.6
TLR4O00206 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TLR4O00206 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC18.78■□□□□ 0.6
TLR4O00206 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC18.78■□□□□ 0.6
TLR4O00206 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TLR4O00206 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
TLR4O00206 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC18.78■□□□□ 0.6
TLR4O00206 GCSHP2-201ENST00000560971 527 ntBASIC18.78■□□□□ 0.6
TLR4O00206 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC18.78■□□□□ 0.6
TLR4O00206 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TLR4O00206 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TLR4O00206 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
TLR4O00206 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC18.78■□□□□ 0.6
TLR4O00206 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
TLR4O00206 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TLR4O00206 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
TLR4O00206 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
TLR4O00206 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC18.78■□□□□ 0.6
TLR4O00206 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC18.78■□□□□ 0.6
TLR4O00206 TBC1D3P2-202ENST00000577902 1649 ntBASIC18.78■□□□□ 0.6
TLR4O00206 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC18.78■□□□□ 0.6
TLR4O00206 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC18.78■□□□□ 0.6
TLR4O00206 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
TLR4O00206 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TLR4O00206 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TLR4O00206 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC18.77■□□□□ 0.6
TLR4O00206 AC005332.1-201ENST00000577698 1310 ntBASIC18.77■□□□□ 0.6
TLR4O00206 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TLR4O00206 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC18.77■□□□□ 0.6
TLR4O00206 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TLR4O00206 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC18.77■□□□□ 0.6
TLR4O00206 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
TLR4O00206 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
TLR4O00206 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TLR4O00206 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TLR4O00206 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC18.77■□□□□ 0.6
TLR4O00206 AC112907.2-201ENST00000448639 330 ntBASIC18.77■□□□□ 0.6
TLR4O00206 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC18.77■□□□□ 0.6
TLR4O00206 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC18.77■□□□□ 0.6
TLR4O00206 AC116407.4-201ENST00000623319 1061 ntBASIC18.77■□□□□ 0.6
TLR4O00206 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC18.77■□□□□ 0.6
TLR4O00206 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TLR4O00206 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC18.77■□□□□ 0.59
TLR4O00206 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
TLR4O00206 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC18.76■□□□□ 0.59
TLR4O00206 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TLR4O00206 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TLR4O00206 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC18.76■□□□□ 0.59
TLR4O00206 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TLR4O00206 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
TLR4O00206 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TLR4O00206 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TLR4O00206 BET1L-202ENST00000332865 533 ntTSL 5 BASIC18.76■□□□□ 0.59
TLR4O00206 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
TLR4O00206 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TLR4O00206 STARP1-201ENST00000397973 869 ntBASIC18.76■□□□□ 0.59
TLR4O00206 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
TLR4O00206 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC18.76■□□□□ 0.59
TLR4O00206 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC18.76■□□□□ 0.59
TLR4O00206 MIR4674-201ENST00000582457 87 ntBASIC18.76■□□□□ 0.59
TLR4O00206 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TLR4O00206 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC18.76■□□□□ 0.59
TLR4O00206 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TLR4O00206 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
TLR4O00206 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
TLR4O00206 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC18.76■□□□□ 0.59
TLR4O00206 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TLR4O00206 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
TLR4O00206 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
TLR4O00206 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TLR4O00206 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
TLR4O00206 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
TLR4O00206 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TLR4O00206 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TLR4O00206 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
TLR4O00206 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TLR4O00206 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC18.75■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms