Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
PDLIM1O00151 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
PDLIM1O00151 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PDLIM1O00151 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PDLIM1O00151 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC18.05■□□□□ 0.48
PDLIM1O00151 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC18.05■□□□□ 0.48
PDLIM1O00151 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC18.05■□□□□ 0.48
PDLIM1O00151 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
PDLIM1O00151 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PDLIM1O00151 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
PDLIM1O00151 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
PDLIM1O00151 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PDLIM1O00151 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC18.05■□□□□ 0.48
PDLIM1O00151 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PDLIM1O00151 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
PDLIM1O00151 AL512353.2-201ENST00000448759 1962 ntBASIC18.05■□□□□ 0.48
PDLIM1O00151 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PDLIM1O00151 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC18.05■□□□□ 0.48
PDLIM1O00151 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC18.05■□□□□ 0.48
PDLIM1O00151 AC092118.2-201ENST00000613495 667 ntBASIC18.05■□□□□ 0.48
PDLIM1O00151 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
PDLIM1O00151 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
PDLIM1O00151 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
PDLIM1O00151 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
PDLIM1O00151 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PDLIM1O00151 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
PDLIM1O00151 LINC01126-201ENST00000623515 1646 ntBASIC18.05■□□□□ 0.48
PDLIM1O00151 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PDLIM1O00151 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PDLIM1O00151 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
PDLIM1O00151 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC18.04■□□□□ 0.48
PDLIM1O00151 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
PDLIM1O00151 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC18.04■□□□□ 0.48
PDLIM1O00151 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC18.04■□□□□ 0.48
PDLIM1O00151 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
PDLIM1O00151 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
PDLIM1O00151 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PDLIM1O00151 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PDLIM1O00151 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
PDLIM1O00151 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PDLIM1O00151 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
PDLIM1O00151 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
PDLIM1O00151 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PDLIM1O00151 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC18.04■□□□□ 0.48
PDLIM1O00151 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC18.04■□□□□ 0.48
PDLIM1O00151 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC18.04■□□□□ 0.48
PDLIM1O00151 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC18.04■□□□□ 0.48
PDLIM1O00151 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
PDLIM1O00151 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
PDLIM1O00151 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PDLIM1O00151 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC18.04■□□□□ 0.48
PDLIM1O00151 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
PDLIM1O00151 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PDLIM1O00151 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PDLIM1O00151 AL355802.2-201ENST00000402069 882 ntBASIC18.04■□□□□ 0.48
PDLIM1O00151 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
PDLIM1O00151 ISCU-212ENST00000547005 795 ntTSL 3 BASIC18.04■□□□□ 0.48
PDLIM1O00151 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
PDLIM1O00151 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PDLIM1O00151 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
PDLIM1O00151 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
PDLIM1O00151 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC18.04■□□□□ 0.48
PDLIM1O00151 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
PDLIM1O00151 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC18.04■□□□□ 0.48
PDLIM1O00151 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PDLIM1O00151 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PDLIM1O00151 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC18.04■□□□□ 0.48
PDLIM1O00151 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
PDLIM1O00151 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
PDLIM1O00151 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC18.03■□□□□ 0.48
PDLIM1O00151 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC18.03■□□□□ 0.48
PDLIM1O00151 CD276-203ENST00000537340 2439 ntTSL 2 BASIC18.03■□□□□ 0.48
PDLIM1O00151 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
PDLIM1O00151 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PDLIM1O00151 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PDLIM1O00151 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PDLIM1O00151 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
PDLIM1O00151 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PDLIM1O00151 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC18.03■□□□□ 0.48
PDLIM1O00151 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PDLIM1O00151 BX276092.2-201ENST00000417668 665 ntBASIC18.03■□□□□ 0.48
PDLIM1O00151 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
PDLIM1O00151 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC18.03■□□□□ 0.48
PDLIM1O00151 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC18.03■□□□□ 0.48
PDLIM1O00151 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
PDLIM1O00151 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC18.03■□□□□ 0.48
PDLIM1O00151 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PDLIM1O00151 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
PDLIM1O00151 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
PDLIM1O00151 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PDLIM1O00151 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC18.03■□□□□ 0.48
PDLIM1O00151 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
PDLIM1O00151 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC18.03■□□□□ 0.48
PDLIM1O00151 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
PDLIM1O00151 GCK-205ENST00000437084 1385 ntTSL 5 BASIC18.03■□□□□ 0.48
PDLIM1O00151 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC18.03■□□□□ 0.48
PDLIM1O00151 PXK-206ENST00000463280 2825 ntTSL 2 BASIC18.03■□□□□ 0.48
PDLIM1O00151 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
PDLIM1O00151 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PDLIM1O00151 AC084018.2-201ENST00000613093 2607 ntBASIC18.02■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms