Protein–RNA interactions for Protein: H3BSU7

TMX2-CTNND1, TMX2-CTNND1 readthrough (NMD candidate), humanhuman

Predictions only

Length 103 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMX2-CTNND1H3BSU7 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
TMX2-CTNND1H3BSU7 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TMX2-CTNND1H3BSU7 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TMX2-CTNND1H3BSU7 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TMX2-CTNND1H3BSU7 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TMX2-CTNND1H3BSU7 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TMX2-CTNND1H3BSU7 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TMX2-CTNND1H3BSU7 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC18.61■□□□□ 0.57
TMX2-CTNND1H3BSU7 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
TMX2-CTNND1H3BSU7 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TMX2-CTNND1H3BSU7 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TMX2-CTNND1H3BSU7 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
TMX2-CTNND1H3BSU7 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC18.61■□□□□ 0.57
TMX2-CTNND1H3BSU7 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
TMX2-CTNND1H3BSU7 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC18.61■□□□□ 0.57
TMX2-CTNND1H3BSU7 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC18.61■□□□□ 0.57
TMX2-CTNND1H3BSU7 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TMX2-CTNND1H3BSU7 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
TMX2-CTNND1H3BSU7 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TMX2-CTNND1H3BSU7 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC18.61■□□□□ 0.57
TMX2-CTNND1H3BSU7 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
TMX2-CTNND1H3BSU7 COX11P1-201ENST00000489116 835 ntBASIC18.61■□□□□ 0.57
TMX2-CTNND1H3BSU7 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC18.61■□□□□ 0.57
TMX2-CTNND1H3BSU7 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
TMX2-CTNND1H3BSU7 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC18.61■□□□□ 0.57
TMX2-CTNND1H3BSU7 AL138966.2-201ENST00000621997 464 ntBASIC18.61■□□□□ 0.57
TMX2-CTNND1H3BSU7 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
TMX2-CTNND1H3BSU7 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
TMX2-CTNND1H3BSU7 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
TMX2-CTNND1H3BSU7 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC18.61■□□□□ 0.57
TMX2-CTNND1H3BSU7 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
TMX2-CTNND1H3BSU7 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC18.61■□□□□ 0.57
TMX2-CTNND1H3BSU7 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
TMX2-CTNND1H3BSU7 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TMX2-CTNND1H3BSU7 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TMX2-CTNND1H3BSU7 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TMX2-CTNND1H3BSU7 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TMX2-CTNND1H3BSU7 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC18.6■□□□□ 0.57
TMX2-CTNND1H3BSU7 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TMX2-CTNND1H3BSU7 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
TMX2-CTNND1H3BSU7 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
TMX2-CTNND1H3BSU7 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC18.6■□□□□ 0.57
TMX2-CTNND1H3BSU7 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TMX2-CTNND1H3BSU7 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TMX2-CTNND1H3BSU7 COPE-203ENST00000351079 907 ntTSL 2 BASIC18.6■□□□□ 0.57
TMX2-CTNND1H3BSU7 FAM8A6P-201ENST00000407496 1135 ntBASIC18.6■□□□□ 0.57
TMX2-CTNND1H3BSU7 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC18.6■□□□□ 0.57
TMX2-CTNND1H3BSU7 GXYLT1P6-201ENST00000456472 1187 ntBASIC18.6■□□□□ 0.57
TMX2-CTNND1H3BSU7 AC008040.2-201ENST00000461049 708 ntBASIC18.6■□□□□ 0.57
TMX2-CTNND1H3BSU7 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC18.6■□□□□ 0.57
TMX2-CTNND1H3BSU7 AC091390.4-202ENST00000476426 537 ntBASIC18.6■□□□□ 0.57
TMX2-CTNND1H3BSU7 CA15P1-201ENST00000481698 905 ntBASIC18.6■□□□□ 0.57
TMX2-CTNND1H3BSU7 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
TMX2-CTNND1H3BSU7 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC18.6■□□□□ 0.57
TMX2-CTNND1H3BSU7 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
TMX2-CTNND1H3BSU7 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
TMX2-CTNND1H3BSU7 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC18.6■□□□□ 0.57
TMX2-CTNND1H3BSU7 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
TMX2-CTNND1H3BSU7 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
TMX2-CTNND1H3BSU7 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC18.6■□□□□ 0.57
TMX2-CTNND1H3BSU7 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC18.6■□□□□ 0.57
TMX2-CTNND1H3BSU7 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TMX2-CTNND1H3BSU7 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC18.6■□□□□ 0.57
TMX2-CTNND1H3BSU7 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
TMX2-CTNND1H3BSU7 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC18.6■□□□□ 0.57
TMX2-CTNND1H3BSU7 AP001271.2-201ENST00000624018 1556 ntBASIC18.59■□□□□ 0.57
TMX2-CTNND1H3BSU7 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TMX2-CTNND1H3BSU7 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC18.59■□□□□ 0.57
TMX2-CTNND1H3BSU7 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
TMX2-CTNND1H3BSU7 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC18.59■□□□□ 0.57
TMX2-CTNND1H3BSU7 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC18.59■□□□□ 0.57
TMX2-CTNND1H3BSU7 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC18.59■□□□□ 0.57
TMX2-CTNND1H3BSU7 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TMX2-CTNND1H3BSU7 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
TMX2-CTNND1H3BSU7 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TMX2-CTNND1H3BSU7 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
TMX2-CTNND1H3BSU7 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
TMX2-CTNND1H3BSU7 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC18.59■□□□□ 0.57
TMX2-CTNND1H3BSU7 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC18.59■□□□□ 0.57
TMX2-CTNND1H3BSU7 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC18.59■□□□□ 0.57
TMX2-CTNND1H3BSU7 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC18.59■□□□□ 0.57
TMX2-CTNND1H3BSU7 AC007663.1-201ENST00000438948 1240 ntBASIC18.59■□□□□ 0.57
TMX2-CTNND1H3BSU7 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC18.59■□□□□ 0.57
TMX2-CTNND1H3BSU7 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC18.59■□□□□ 0.57
TMX2-CTNND1H3BSU7 AL160286.2-201ENST00000567150 934 ntBASIC18.59■□□□□ 0.57
TMX2-CTNND1H3BSU7 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
TMX2-CTNND1H3BSU7 PODN-203ENST00000395871 2744 ntTSL 5 BASIC18.59■□□□□ 0.57
TMX2-CTNND1H3BSU7 CD37-204ENST00000535669 1674 ntTSL 2 BASIC18.59■□□□□ 0.57
TMX2-CTNND1H3BSU7 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
TMX2-CTNND1H3BSU7 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TMX2-CTNND1H3BSU7 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TMX2-CTNND1H3BSU7 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TMX2-CTNND1H3BSU7 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TMX2-CTNND1H3BSU7 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC18.59■□□□□ 0.57
TMX2-CTNND1H3BSU7 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC18.59■□□□□ 0.57
TMX2-CTNND1H3BSU7 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC18.58■□□□□ 0.57
TMX2-CTNND1H3BSU7 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
TMX2-CTNND1H3BSU7 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC18.58■□□□□ 0.57
TMX2-CTNND1H3BSU7 AL049812.1-201ENST00000432563 2267 ntBASIC18.58■□□□□ 0.57
TMX2-CTNND1H3BSU7 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms