Protein–RNA interactions for Protein: E9PGA6

C1QTNF3-AMACR, C1QTNF3-AMACR readthrough (NMD candidate), humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C1QTNF3-AMACRE9PGA6 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC19.02■□□□□ 0.64
C1QTNF3-AMACRE9PGA6 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
C1QTNF3-AMACRE9PGA6 AL441883.1-201ENST00000566170 1045 ntBASIC19.02■□□□□ 0.64
C1QTNF3-AMACRE9PGA6 NT5C-210ENST00000582160 860 ntTSL 2 BASIC19.02■□□□□ 0.64
C1QTNF3-AMACRE9PGA6 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC19.02■□□□□ 0.64
C1QTNF3-AMACRE9PGA6 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
C1QTNF3-AMACRE9PGA6 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC19.02■□□□□ 0.64
C1QTNF3-AMACRE9PGA6 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC19.02■□□□□ 0.64
C1QTNF3-AMACRE9PGA6 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
C1QTNF3-AMACRE9PGA6 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
C1QTNF3-AMACRE9PGA6 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
C1QTNF3-AMACRE9PGA6 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
C1QTNF3-AMACRE9PGA6 GPAT2P1-201ENST00000444924 1672 ntBASIC19.01■□□□□ 0.63
C1QTNF3-AMACRE9PGA6 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
C1QTNF3-AMACRE9PGA6 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
C1QTNF3-AMACRE9PGA6 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
C1QTNF3-AMACRE9PGA6 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC19.01■□□□□ 0.63
C1QTNF3-AMACRE9PGA6 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
C1QTNF3-AMACRE9PGA6 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
C1QTNF3-AMACRE9PGA6 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
C1QTNF3-AMACRE9PGA6 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
C1QTNF3-AMACRE9PGA6 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC19.01■□□□□ 0.63
C1QTNF3-AMACRE9PGA6 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
C1QTNF3-AMACRE9PGA6 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC19.01■□□□□ 0.63
C1QTNF3-AMACRE9PGA6 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
C1QTNF3-AMACRE9PGA6 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
C1QTNF3-AMACRE9PGA6 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
C1QTNF3-AMACRE9PGA6 BID-204ENST00000399767 2129 ntTSL 2 BASIC19.01■□□□□ 0.63
C1QTNF3-AMACRE9PGA6 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
C1QTNF3-AMACRE9PGA6 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC19.01■□□□□ 0.63
C1QTNF3-AMACRE9PGA6 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
C1QTNF3-AMACRE9PGA6 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC19■□□□□ 0.63
C1QTNF3-AMACRE9PGA6 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
C1QTNF3-AMACRE9PGA6 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
C1QTNF3-AMACRE9PGA6 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
C1QTNF3-AMACRE9PGA6 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC19■□□□□ 0.63
C1QTNF3-AMACRE9PGA6 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
C1QTNF3-AMACRE9PGA6 GAD2-202ENST00000376248 680 ntTSL 5 BASIC19■□□□□ 0.63
C1QTNF3-AMACRE9PGA6 AL023284.2-201ENST00000405850 579 ntBASIC19■□□□□ 0.63
C1QTNF3-AMACRE9PGA6 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC19■□□□□ 0.63
C1QTNF3-AMACRE9PGA6 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC19■□□□□ 0.63
C1QTNF3-AMACRE9PGA6 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC19■□□□□ 0.63
C1QTNF3-AMACRE9PGA6 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC19■□□□□ 0.63
C1QTNF3-AMACRE9PGA6 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC19■□□□□ 0.63
C1QTNF3-AMACRE9PGA6 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC19■□□□□ 0.63
C1QTNF3-AMACRE9PGA6 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC19■□□□□ 0.63
C1QTNF3-AMACRE9PGA6 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC19■□□□□ 0.63
C1QTNF3-AMACRE9PGA6 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC19■□□□□ 0.63
C1QTNF3-AMACRE9PGA6 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC19■□□□□ 0.63
C1QTNF3-AMACRE9PGA6 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC19■□□□□ 0.63
C1QTNF3-AMACRE9PGA6 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
C1QTNF3-AMACRE9PGA6 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
C1QTNF3-AMACRE9PGA6 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
C1QTNF3-AMACRE9PGA6 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
C1QTNF3-AMACRE9PGA6 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
C1QTNF3-AMACRE9PGA6 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC19■□□□□ 0.63
C1QTNF3-AMACRE9PGA6 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC19■□□□□ 0.63
C1QTNF3-AMACRE9PGA6 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
C1QTNF3-AMACRE9PGA6 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC19■□□□□ 0.63
C1QTNF3-AMACRE9PGA6 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
C1QTNF3-AMACRE9PGA6 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC19■□□□□ 0.63
C1QTNF3-AMACRE9PGA6 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
C1QTNF3-AMACRE9PGA6 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
C1QTNF3-AMACRE9PGA6 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
C1QTNF3-AMACRE9PGA6 KATNBL1P6-202ENST00000562413 1466 ntBASIC18.99■□□□□ 0.63
C1QTNF3-AMACRE9PGA6 ILF2-202ENST00000368681 726 ntTSL 2 BASIC18.99■□□□□ 0.63
C1QTNF3-AMACRE9PGA6 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC18.99■□□□□ 0.63
C1QTNF3-AMACRE9PGA6 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
C1QTNF3-AMACRE9PGA6 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC18.99■□□□□ 0.63
C1QTNF3-AMACRE9PGA6 AL359075.1-203ENST00000462729 1002 ntBASIC18.99■□□□□ 0.63
C1QTNF3-AMACRE9PGA6 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
C1QTNF3-AMACRE9PGA6 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC18.99■□□□□ 0.63
C1QTNF3-AMACRE9PGA6 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
C1QTNF3-AMACRE9PGA6 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC18.99■□□□□ 0.63
C1QTNF3-AMACRE9PGA6 ETFA-216ENST00000560726 942 ntTSL 3 BASIC18.99■□□□□ 0.63
C1QTNF3-AMACRE9PGA6 MIR3180-5-201ENST00000583743 153 ntBASIC18.99■□□□□ 0.63
C1QTNF3-AMACRE9PGA6 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
C1QTNF3-AMACRE9PGA6 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC18.99■□□□□ 0.63
C1QTNF3-AMACRE9PGA6 MYC-208ENST00000641036 567 ntBASIC18.99■□□□□ 0.63
C1QTNF3-AMACRE9PGA6 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC18.99■□□□□ 0.63
C1QTNF3-AMACRE9PGA6 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
C1QTNF3-AMACRE9PGA6 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
C1QTNF3-AMACRE9PGA6 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
C1QTNF3-AMACRE9PGA6 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
C1QTNF3-AMACRE9PGA6 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
C1QTNF3-AMACRE9PGA6 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
C1QTNF3-AMACRE9PGA6 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC18.98■□□□□ 0.63
C1QTNF3-AMACRE9PGA6 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
C1QTNF3-AMACRE9PGA6 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
C1QTNF3-AMACRE9PGA6 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
C1QTNF3-AMACRE9PGA6 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC18.98■□□□□ 0.63
C1QTNF3-AMACRE9PGA6 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
C1QTNF3-AMACRE9PGA6 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC18.98■□□□□ 0.63
C1QTNF3-AMACRE9PGA6 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
C1QTNF3-AMACRE9PGA6 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
C1QTNF3-AMACRE9PGA6 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC18.98■□□□□ 0.63
C1QTNF3-AMACRE9PGA6 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
C1QTNF3-AMACRE9PGA6 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
C1QTNF3-AMACRE9PGA6 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
C1QTNF3-AMACRE9PGA6 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC18.98■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 57 ms