Protein–RNA interactions for Protein: A7MD48

SRRM4, Serine/arginine repetitive matrix protein 4, humanhuman

Known RBP Predictions only

Length 611 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4A7MD48 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC15.28■□□□□ 0.04
SRRM4A7MD48 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SRRM4A7MD48 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC15.28■□□□□ 0.04
SRRM4A7MD48 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC15.28■□□□□ 0.04
SRRM4A7MD48 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
SRRM4A7MD48 HTR7P1-201ENST00000538670 1336 ntBASIC15.28■□□□□ 0.04
SRRM4A7MD48 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC15.28■□□□□ 0.04
SRRM4A7MD48 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
SRRM4A7MD48 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC15.28■□□□□ 0.04
SRRM4A7MD48 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
SRRM4A7MD48 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SRRM4A7MD48 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC15.28■□□□□ 0.04
SRRM4A7MD48 GLRB-205ENST00000512619 728 ntTSL 3 BASIC15.28■□□□□ 0.04
SRRM4A7MD48 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC15.28■□□□□ 0.04
SRRM4A7MD48 TK2-204ENST00000525974 1178 ntTSL 2 BASIC15.28■□□□□ 0.04
SRRM4A7MD48 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC15.28■□□□□ 0.04
SRRM4A7MD48 CABP2-204ENST00000636477 941 ntTSL 5 BASIC15.28■□□□□ 0.04
SRRM4A7MD48 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
SRRM4A7MD48 AC009113.1-201ENST00000570267 2443 ntBASIC15.28■□□□□ 0.04
SRRM4A7MD48 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SRRM4A7MD48 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC15.28■□□□□ 0.04
SRRM4A7MD48 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
SRRM4A7MD48 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SRRM4A7MD48 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SRRM4A7MD48 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC15.28■□□□□ 0.04
SRRM4A7MD48 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SRRM4A7MD48 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SRRM4A7MD48 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
SRRM4A7MD48 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
SRRM4A7MD48 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SRRM4A7MD48 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SRRM4A7MD48 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
SRRM4A7MD48 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SRRM4A7MD48 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC15.27■□□□□ 0.04
SRRM4A7MD48 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SRRM4A7MD48 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC15.27■□□□□ 0.04
SRRM4A7MD48 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SRRM4A7MD48 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SRRM4A7MD48 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SRRM4A7MD48 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SRRM4A7MD48 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SRRM4A7MD48 NIFKP9-201ENST00000419265 221 ntBASIC15.27■□□□□ 0.04
SRRM4A7MD48 AC004980.1-204ENST00000429707 299 ntBASIC15.27■□□□□ 0.04
SRRM4A7MD48 PTPA-216ENST00000432651 857 ntTSL 2 BASIC15.27■□□□□ 0.04
SRRM4A7MD48 RPS2P4-201ENST00000476944 856 ntBASIC15.27■□□□□ 0.04
SRRM4A7MD48 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC15.27■□□□□ 0.04
SRRM4A7MD48 RPPH1-201ENST00000516869 333 ntBASIC15.27■□□□□ 0.04
SRRM4A7MD48 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC15.27■□□□□ 0.04
SRRM4A7MD48 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC15.27■□□□□ 0.04
SRRM4A7MD48 MMD2-204ENST00000612910 778 ntTSL 5 BASIC15.27■□□□□ 0.04
SRRM4A7MD48 AC083906.6-201ENST00000641366 219 ntBASIC15.27■□□□□ 0.04
SRRM4A7MD48 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
SRRM4A7MD48 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
SRRM4A7MD48 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
SRRM4A7MD48 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
SRRM4A7MD48 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC15.27■□□□□ 0.03
SRRM4A7MD48 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
SRRM4A7MD48 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
SRRM4A7MD48 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.03
SRRM4A7MD48 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
SRRM4A7MD48 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
SRRM4A7MD48 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
SRRM4A7MD48 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC15.27■□□□□ 0.03
SRRM4A7MD48 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
SRRM4A7MD48 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
SRRM4A7MD48 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SRRM4A7MD48 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC15.26■□□□□ 0.03
SRRM4A7MD48 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
SRRM4A7MD48 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
SRRM4A7MD48 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC15.26■□□□□ 0.03
SRRM4A7MD48 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
SRRM4A7MD48 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
SRRM4A7MD48 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SRRM4A7MD48 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SRRM4A7MD48 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
SRRM4A7MD48 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC15.26■□□□□ 0.03
SRRM4A7MD48 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC15.26■□□□□ 0.03
SRRM4A7MD48 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC15.26■□□□□ 0.03
SRRM4A7MD48 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
SRRM4A7MD48 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
SRRM4A7MD48 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
SRRM4A7MD48 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC15.26■□□□□ 0.03
SRRM4A7MD48 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC15.26■□□□□ 0.03
SRRM4A7MD48 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SRRM4A7MD48 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC15.26■□□□□ 0.03
SRRM4A7MD48 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC15.26■□□□□ 0.03
SRRM4A7MD48 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
SRRM4A7MD48 AL353708.3-201ENST00000610272 989 ntBASIC15.26■□□□□ 0.03
SRRM4A7MD48 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC15.26■□□□□ 0.03
SRRM4A7MD48 AC131212.4-201ENST00000623606 975 ntBASIC15.26■□□□□ 0.03
SRRM4A7MD48 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
SRRM4A7MD48 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC15.26■□□□□ 0.03
SRRM4A7MD48 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC15.26■□□□□ 0.03
SRRM4A7MD48 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC15.26■□□□□ 0.03
SRRM4A7MD48 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC15.26■□□□□ 0.03
SRRM4A7MD48 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
SRRM4A7MD48 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SRRM4A7MD48 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
SRRM4A7MD48 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
SRRM4A7MD48 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms