Protein–RNA interactions for Protein: A6NDI0

TRIM49B, Putative tripartite motif-containing protein 49B, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49BA6NDI0 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
TRIM49BA6NDI0 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TRIM49BA6NDI0 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TRIM49BA6NDI0 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
TRIM49BA6NDI0 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
TRIM49BA6NDI0 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
TRIM49BA6NDI0 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC20.92■□□□□ 0.94
TRIM49BA6NDI0 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
TRIM49BA6NDI0 KRT8P11-201ENST00000409686 1436 ntBASIC20.92■□□□□ 0.94
TRIM49BA6NDI0 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
TRIM49BA6NDI0 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
TRIM49BA6NDI0 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
TRIM49BA6NDI0 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
TRIM49BA6NDI0 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
TRIM49BA6NDI0 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TRIM49BA6NDI0 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC20.92■□□□□ 0.94
TRIM49BA6NDI0 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC20.92■□□□□ 0.94
TRIM49BA6NDI0 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
TRIM49BA6NDI0 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TRIM49BA6NDI0 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC20.92■□□□□ 0.94
TRIM49BA6NDI0 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
TRIM49BA6NDI0 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
TRIM49BA6NDI0 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
TRIM49BA6NDI0 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC20.91■□□□□ 0.94
TRIM49BA6NDI0 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
TRIM49BA6NDI0 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
TRIM49BA6NDI0 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
TRIM49BA6NDI0 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
TRIM49BA6NDI0 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
TRIM49BA6NDI0 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
TRIM49BA6NDI0 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
TRIM49BA6NDI0 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC20.91■□□□□ 0.94
TRIM49BA6NDI0 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
TRIM49BA6NDI0 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
TRIM49BA6NDI0 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC20.91■□□□□ 0.94
TRIM49BA6NDI0 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC20.91■□□□□ 0.94
TRIM49BA6NDI0 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
TRIM49BA6NDI0 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC20.91■□□□□ 0.94
TRIM49BA6NDI0 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC20.91■□□□□ 0.94
TRIM49BA6NDI0 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC20.91■□□□□ 0.94
TRIM49BA6NDI0 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC20.91■□□□□ 0.94
TRIM49BA6NDI0 MMD2-204ENST00000612910 778 ntTSL 5 BASIC20.91■□□□□ 0.94
TRIM49BA6NDI0 ABBA01031674.1-201ENST00000635145 728 ntBASIC20.91■□□□□ 0.94
TRIM49BA6NDI0 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
TRIM49BA6NDI0 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
TRIM49BA6NDI0 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
TRIM49BA6NDI0 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC20.9■□□□□ 0.94
TRIM49BA6NDI0 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
TRIM49BA6NDI0 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
TRIM49BA6NDI0 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
TRIM49BA6NDI0 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TRIM49BA6NDI0 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC20.9■□□□□ 0.94
TRIM49BA6NDI0 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
TRIM49BA6NDI0 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC20.9■□□□□ 0.94
TRIM49BA6NDI0 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TRIM49BA6NDI0 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TRIM49BA6NDI0 PTPA-216ENST00000432651 857 ntTSL 2 BASIC20.9■□□□□ 0.94
TRIM49BA6NDI0 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC20.9■□□□□ 0.94
TRIM49BA6NDI0 RPPH1-201ENST00000516869 333 ntBASIC20.9■□□□□ 0.94
TRIM49BA6NDI0 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
TRIM49BA6NDI0 CABP2-204ENST00000636477 941 ntTSL 5 BASIC20.9■□□□□ 0.94
TRIM49BA6NDI0 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
TRIM49BA6NDI0 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TRIM49BA6NDI0 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
TRIM49BA6NDI0 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
TRIM49BA6NDI0 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC20.9■□□□□ 0.94
TRIM49BA6NDI0 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC20.9■□□□□ 0.94
TRIM49BA6NDI0 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC20.9■□□□□ 0.94
TRIM49BA6NDI0 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
TRIM49BA6NDI0 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.94
TRIM49BA6NDI0 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC20.89■□□□□ 0.94
TRIM49BA6NDI0 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
TRIM49BA6NDI0 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC20.89■□□□□ 0.94
TRIM49BA6NDI0 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.94
TRIM49BA6NDI0 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
TRIM49BA6NDI0 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC20.89■□□□□ 0.93
TRIM49BA6NDI0 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
TRIM49BA6NDI0 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC20.89■□□□□ 0.93
TRIM49BA6NDI0 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
TRIM49BA6NDI0 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC20.89■□□□□ 0.93
TRIM49BA6NDI0 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
TRIM49BA6NDI0 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
TRIM49BA6NDI0 FDX2-207ENST00000494368 584 ntTSL 4 BASIC20.89■□□□□ 0.93
TRIM49BA6NDI0 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
TRIM49BA6NDI0 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC20.89■□□□□ 0.93
TRIM49BA6NDI0 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC20.89■□□□□ 0.93
TRIM49BA6NDI0 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
TRIM49BA6NDI0 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC20.89■□□□□ 0.93
TRIM49BA6NDI0 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
TRIM49BA6NDI0 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC20.89■□□□□ 0.93
TRIM49BA6NDI0 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC20.89■□□□□ 0.93
TRIM49BA6NDI0 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC20.89■□□□□ 0.93
TRIM49BA6NDI0 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
TRIM49BA6NDI0 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
TRIM49BA6NDI0 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
TRIM49BA6NDI0 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC20.89■□□□□ 0.93
TRIM49BA6NDI0 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
TRIM49BA6NDI0 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
TRIM49BA6NDI0 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC20.88■□□□□ 0.93
TRIM49BA6NDI0 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms