Protein–RNA interactions for Protein: A0A0A6YYK7

TRAV19, T-cell receptor alpha variable 19 (Fragment), humanhuman

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV19A0A0A6YYK7 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
TRAV19A0A0A6YYK7 CD81-212ENST00000526072 1172 ntTSL 5 BASIC19.63■□□□□ 0.73
TRAV19A0A0A6YYK7 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
TRAV19A0A0A6YYK7 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
TRAV19A0A0A6YYK7 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC19.63■□□□□ 0.73
TRAV19A0A0A6YYK7 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
TRAV19A0A0A6YYK7 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TRAV19A0A0A6YYK7 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
TRAV19A0A0A6YYK7 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC19.63■□□□□ 0.73
TRAV19A0A0A6YYK7 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TRAV19A0A0A6YYK7 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TRAV19A0A0A6YYK7 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TRAV19A0A0A6YYK7 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TRAV19A0A0A6YYK7 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
TRAV19A0A0A6YYK7 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TRAV19A0A0A6YYK7 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
TRAV19A0A0A6YYK7 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC19.62■□□□□ 0.73
TRAV19A0A0A6YYK7 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
TRAV19A0A0A6YYK7 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TRAV19A0A0A6YYK7 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC19.62■□□□□ 0.73
TRAV19A0A0A6YYK7 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
TRAV19A0A0A6YYK7 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC19.62■□□□□ 0.73
TRAV19A0A0A6YYK7 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
TRAV19A0A0A6YYK7 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC19.62■□□□□ 0.73
TRAV19A0A0A6YYK7 MIR3180-5-201ENST00000583743 153 ntBASIC19.62■□□□□ 0.73
TRAV19A0A0A6YYK7 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC19.62■□□□□ 0.73
TRAV19A0A0A6YYK7 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC19.62■□□□□ 0.73
TRAV19A0A0A6YYK7 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TRAV19A0A0A6YYK7 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC19.62■□□□□ 0.73
TRAV19A0A0A6YYK7 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC19.62■□□□□ 0.73
TRAV19A0A0A6YYK7 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
TRAV19A0A0A6YYK7 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TRAV19A0A0A6YYK7 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TRAV19A0A0A6YYK7 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC19.62■□□□□ 0.73
TRAV19A0A0A6YYK7 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
TRAV19A0A0A6YYK7 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC19.62■□□□□ 0.73
TRAV19A0A0A6YYK7 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
TRAV19A0A0A6YYK7 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC19.62■□□□□ 0.73
TRAV19A0A0A6YYK7 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
TRAV19A0A0A6YYK7 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
TRAV19A0A0A6YYK7 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
TRAV19A0A0A6YYK7 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
TRAV19A0A0A6YYK7 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
TRAV19A0A0A6YYK7 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
TRAV19A0A0A6YYK7 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TRAV19A0A0A6YYK7 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC19.61■□□□□ 0.73
TRAV19A0A0A6YYK7 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
TRAV19A0A0A6YYK7 ME2-218ENST00000640965 2476 ntTSL 5 BASIC19.61■□□□□ 0.73
TRAV19A0A0A6YYK7 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC19.61■□□□□ 0.73
TRAV19A0A0A6YYK7 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TRAV19A0A0A6YYK7 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TRAV19A0A0A6YYK7 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
TRAV19A0A0A6YYK7 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
TRAV19A0A0A6YYK7 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TRAV19A0A0A6YYK7 AC034232.1-201ENST00000506026 1064 ntBASIC19.61■□□□□ 0.73
TRAV19A0A0A6YYK7 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
TRAV19A0A0A6YYK7 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC19.61■□□□□ 0.73
TRAV19A0A0A6YYK7 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
TRAV19A0A0A6YYK7 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC19.61■□□□□ 0.73
TRAV19A0A0A6YYK7 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
TRAV19A0A0A6YYK7 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC19.61■□□□□ 0.73
TRAV19A0A0A6YYK7 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC19.61■□□□□ 0.73
TRAV19A0A0A6YYK7 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
TRAV19A0A0A6YYK7 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC19.61■□□□□ 0.73
TRAV19A0A0A6YYK7 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
TRAV19A0A0A6YYK7 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC19.61■□□□□ 0.73
TRAV19A0A0A6YYK7 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
TRAV19A0A0A6YYK7 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
TRAV19A0A0A6YYK7 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC19.6■□□□□ 0.73
TRAV19A0A0A6YYK7 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC19.6■□□□□ 0.73
TRAV19A0A0A6YYK7 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC19.6■□□□□ 0.73
TRAV19A0A0A6YYK7 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
TRAV19A0A0A6YYK7 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
TRAV19A0A0A6YYK7 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
TRAV19A0A0A6YYK7 TEX21P-204ENST00000641479 1693 ntBASIC19.6■□□□□ 0.73
TRAV19A0A0A6YYK7 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TRAV19A0A0A6YYK7 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC19.6■□□□□ 0.73
TRAV19A0A0A6YYK7 COPS8-203ENST00000409334 794 ntTSL 5 BASIC19.6■□□□□ 0.73
TRAV19A0A0A6YYK7 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TRAV19A0A0A6YYK7 SPDYE15P-201ENST00000424157 909 ntBASIC19.6■□□□□ 0.73
TRAV19A0A0A6YYK7 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
TRAV19A0A0A6YYK7 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC19.6■□□□□ 0.73
TRAV19A0A0A6YYK7 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC19.6■□□□□ 0.73
TRAV19A0A0A6YYK7 VENTXP5-201ENST00000523979 775 ntBASIC19.6■□□□□ 0.73
TRAV19A0A0A6YYK7 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC19.6■□□□□ 0.73
TRAV19A0A0A6YYK7 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC19.6■□□□□ 0.73
TRAV19A0A0A6YYK7 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC19.6■□□□□ 0.73
TRAV19A0A0A6YYK7 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC19.6■□□□□ 0.73
TRAV19A0A0A6YYK7 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC19.6■□□□□ 0.73
TRAV19A0A0A6YYK7 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TRAV19A0A0A6YYK7 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC19.6■□□□□ 0.73
TRAV19A0A0A6YYK7 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
TRAV19A0A0A6YYK7 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC19.6■□□□□ 0.73
TRAV19A0A0A6YYK7 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TRAV19A0A0A6YYK7 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TRAV19A0A0A6YYK7 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC19.6■□□□□ 0.73
TRAV19A0A0A6YYK7 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC19.6■□□□□ 0.73
TRAV19A0A0A6YYK7 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TRAV19A0A0A6YYK7 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TRAV19A0A0A6YYK7 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms