Protein–RNA interactions for Protein: A0A0A6YYK1

TRAV8-1, T-cell receptor alpha variable 8-1 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-1A0A0A6YYK1 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRAV8-1A0A0A6YYK1 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC14.43□□□□□ -0.1
TRAV8-1A0A0A6YYK1 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRAV8-1A0A0A6YYK1 CD276-203ENST00000537340 2439 ntTSL 2 BASIC14.43□□□□□ -0.1
TRAV8-1A0A0A6YYK1 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRAV8-1A0A0A6YYK1 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRAV8-1A0A0A6YYK1 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC14.43□□□□□ -0.1
TRAV8-1A0A0A6YYK1 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRAV8-1A0A0A6YYK1 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRAV8-1A0A0A6YYK1 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
TRAV8-1A0A0A6YYK1 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
TRAV8-1A0A0A6YYK1 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRAV8-1A0A0A6YYK1 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRAV8-1A0A0A6YYK1 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC14.43□□□□□ -0.1
TRAV8-1A0A0A6YYK1 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC14.43□□□□□ -0.1
TRAV8-1A0A0A6YYK1 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC14.43□□□□□ -0.1
TRAV8-1A0A0A6YYK1 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRAV8-1A0A0A6YYK1 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC14.43□□□□□ -0.1
TRAV8-1A0A0A6YYK1 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRAV8-1A0A0A6YYK1 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRAV8-1A0A0A6YYK1 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
TRAV8-1A0A0A6YYK1 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
TRAV8-1A0A0A6YYK1 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRAV8-1A0A0A6YYK1 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRAV8-1A0A0A6YYK1 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
TRAV8-1A0A0A6YYK1 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRAV8-1A0A0A6YYK1 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
TRAV8-1A0A0A6YYK1 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC14.43□□□□□ -0.1
TRAV8-1A0A0A6YYK1 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRAV8-1A0A0A6YYK1 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRAV8-1A0A0A6YYK1 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC14.43□□□□□ -0.1
TRAV8-1A0A0A6YYK1 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
TRAV8-1A0A0A6YYK1 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC14.42□□□□□ -0.1
TRAV8-1A0A0A6YYK1 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
TRAV8-1A0A0A6YYK1 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
TRAV8-1A0A0A6YYK1 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
TRAV8-1A0A0A6YYK1 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
TRAV8-1A0A0A6YYK1 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
TRAV8-1A0A0A6YYK1 AC067852.2-201ENST00000590513 2313 ntBASIC14.42□□□□□ -0.1
TRAV8-1A0A0A6YYK1 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
TRAV8-1A0A0A6YYK1 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC14.42□□□□□ -0.1
TRAV8-1A0A0A6YYK1 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
TRAV8-1A0A0A6YYK1 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TRAV8-1A0A0A6YYK1 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TRAV8-1A0A0A6YYK1 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TRAV8-1A0A0A6YYK1 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TRAV8-1A0A0A6YYK1 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
TRAV8-1A0A0A6YYK1 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
TRAV8-1A0A0A6YYK1 FEM1AP3-201ENST00000403722 1741 ntBASIC14.42□□□□□ -0.1
TRAV8-1A0A0A6YYK1 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TRAV8-1A0A0A6YYK1 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
TRAV8-1A0A0A6YYK1 ME3-201ENST00000323418 1068 ntTSL 5 BASIC14.42□□□□□ -0.1
TRAV8-1A0A0A6YYK1 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
TRAV8-1A0A0A6YYK1 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC14.42□□□□□ -0.1
TRAV8-1A0A0A6YYK1 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
TRAV8-1A0A0A6YYK1 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
TRAV8-1A0A0A6YYK1 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
TRAV8-1A0A0A6YYK1 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC14.42□□□□□ -0.1
TRAV8-1A0A0A6YYK1 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TRAV8-1A0A0A6YYK1 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TRAV8-1A0A0A6YYK1 MADD-208ENST00000405573 1823 ntTSL 5 BASIC14.42□□□□□ -0.1
TRAV8-1A0A0A6YYK1 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TRAV8-1A0A0A6YYK1 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
TRAV8-1A0A0A6YYK1 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC14.42□□□□□ -0.1
TRAV8-1A0A0A6YYK1 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC14.42□□□□□ -0.1
TRAV8-1A0A0A6YYK1 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
TRAV8-1A0A0A6YYK1 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC14.42□□□□□ -0.1
TRAV8-1A0A0A6YYK1 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC14.42□□□□□ -0.1
TRAV8-1A0A0A6YYK1 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TRAV8-1A0A0A6YYK1 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
TRAV8-1A0A0A6YYK1 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC14.42□□□□□ -0.1
TRAV8-1A0A0A6YYK1 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC14.42□□□□□ -0.1
TRAV8-1A0A0A6YYK1 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC14.41□□□□□ -0.1
TRAV8-1A0A0A6YYK1 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
TRAV8-1A0A0A6YYK1 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC14.41□□□□□ -0.1
TRAV8-1A0A0A6YYK1 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC14.41□□□□□ -0.1
TRAV8-1A0A0A6YYK1 KRT8P8-201ENST00000434750 1448 ntBASIC14.41□□□□□ -0.1
TRAV8-1A0A0A6YYK1 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC14.41□□□□□ -0.1
TRAV8-1A0A0A6YYK1 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRAV8-1A0A0A6YYK1 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRAV8-1A0A0A6YYK1 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC14.41□□□□□ -0.1
TRAV8-1A0A0A6YYK1 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRAV8-1A0A0A6YYK1 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
TRAV8-1A0A0A6YYK1 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
TRAV8-1A0A0A6YYK1 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
TRAV8-1A0A0A6YYK1 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
TRAV8-1A0A0A6YYK1 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
TRAV8-1A0A0A6YYK1 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRAV8-1A0A0A6YYK1 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC14.41□□□□□ -0.1
TRAV8-1A0A0A6YYK1 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
TRAV8-1A0A0A6YYK1 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRAV8-1A0A0A6YYK1 MFF-205ENST00000354503 1085 ntTSL 2 BASIC14.41□□□□□ -0.1
TRAV8-1A0A0A6YYK1 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC14.41□□□□□ -0.1
TRAV8-1A0A0A6YYK1 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC14.41□□□□□ -0.1
TRAV8-1A0A0A6YYK1 AC005829.2-201ENST00000571422 1056 ntBASIC14.41□□□□□ -0.1
TRAV8-1A0A0A6YYK1 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC14.41□□□□□ -0.1
TRAV8-1A0A0A6YYK1 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
TRAV8-1A0A0A6YYK1 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC14.41□□□□□ -0.1
TRAV8-1A0A0A6YYK1 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRAV8-1A0A0A6YYK1 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms