Protein–RNA interactions for Protein: A0A0A6YY99

TNFSF12-TNFSF13, Protein TNFSF12-TNFSF13, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF12-TNFSF13A0A0A6YY99 KRT8P9-201ENST00000558927 1449 ntBASIC17.28■□□□□ 0.36
TNFSF12-TNFSF13A0A0A6YY99 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
TNFSF12-TNFSF13A0A0A6YY99 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TNFSF12-TNFSF13A0A0A6YY99 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
TNFSF12-TNFSF13A0A0A6YY99 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TNFSF12-TNFSF13A0A0A6YY99 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC17.28■□□□□ 0.36
TNFSF12-TNFSF13A0A0A6YY99 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TNFSF12-TNFSF13A0A0A6YY99 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TNFSF12-TNFSF13A0A0A6YY99 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC17.28■□□□□ 0.36
TNFSF12-TNFSF13A0A0A6YY99 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TNFSF12-TNFSF13A0A0A6YY99 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TNFSF12-TNFSF13A0A0A6YY99 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
TNFSF12-TNFSF13A0A0A6YY99 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TNFSF12-TNFSF13A0A0A6YY99 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
TNFSF12-TNFSF13A0A0A6YY99 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC17.27■□□□□ 0.36
TNFSF12-TNFSF13A0A0A6YY99 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
TNFSF12-TNFSF13A0A0A6YY99 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TNFSF12-TNFSF13A0A0A6YY99 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TNFSF12-TNFSF13A0A0A6YY99 MIR1238-201ENST00000408483 83 ntBASIC17.27■□□□□ 0.36
TNFSF12-TNFSF13A0A0A6YY99 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC17.27■□□□□ 0.36
TNFSF12-TNFSF13A0A0A6YY99 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
TNFSF12-TNFSF13A0A0A6YY99 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC17.27■□□□□ 0.36
TNFSF12-TNFSF13A0A0A6YY99 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
TNFSF12-TNFSF13A0A0A6YY99 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TNFSF12-TNFSF13A0A0A6YY99 FITM1-202ENST00000559294 800 ntBASIC17.27■□□□□ 0.36
TNFSF12-TNFSF13A0A0A6YY99 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC17.27■□□□□ 0.36
TNFSF12-TNFSF13A0A0A6YY99 CKBP1-201ENST00000565489 1086 ntBASIC17.27■□□□□ 0.36
TNFSF12-TNFSF13A0A0A6YY99 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC17.27■□□□□ 0.36
TNFSF12-TNFSF13A0A0A6YY99 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC17.27■□□□□ 0.36
TNFSF12-TNFSF13A0A0A6YY99 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC17.27■□□□□ 0.36
TNFSF12-TNFSF13A0A0A6YY99 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC17.27■□□□□ 0.36
TNFSF12-TNFSF13A0A0A6YY99 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TNFSF12-TNFSF13A0A0A6YY99 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
TNFSF12-TNFSF13A0A0A6YY99 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TNFSF12-TNFSF13A0A0A6YY99 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TNFSF12-TNFSF13A0A0A6YY99 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
TNFSF12-TNFSF13A0A0A6YY99 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
TNFSF12-TNFSF13A0A0A6YY99 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
TNFSF12-TNFSF13A0A0A6YY99 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
TNFSF12-TNFSF13A0A0A6YY99 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
TNFSF12-TNFSF13A0A0A6YY99 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
TNFSF12-TNFSF13A0A0A6YY99 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC17.27■□□□□ 0.35
TNFSF12-TNFSF13A0A0A6YY99 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC17.26■□□□□ 0.35
TNFSF12-TNFSF13A0A0A6YY99 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
TNFSF12-TNFSF13A0A0A6YY99 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC17.26■□□□□ 0.35
TNFSF12-TNFSF13A0A0A6YY99 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
TNFSF12-TNFSF13A0A0A6YY99 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC17.26■□□□□ 0.35
TNFSF12-TNFSF13A0A0A6YY99 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TNFSF12-TNFSF13A0A0A6YY99 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TNFSF12-TNFSF13A0A0A6YY99 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC17.26■□□□□ 0.35
TNFSF12-TNFSF13A0A0A6YY99 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC17.26■□□□□ 0.35
TNFSF12-TNFSF13A0A0A6YY99 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TNFSF12-TNFSF13A0A0A6YY99 BX323043.1-201ENST00000641006 1765 ntBASIC17.26■□□□□ 0.35
TNFSF12-TNFSF13A0A0A6YY99 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TNFSF12-TNFSF13A0A0A6YY99 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC17.26■□□□□ 0.35
TNFSF12-TNFSF13A0A0A6YY99 AL390955.1-201ENST00000428694 934 ntBASIC17.26■□□□□ 0.35
TNFSF12-TNFSF13A0A0A6YY99 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC17.26■□□□□ 0.35
TNFSF12-TNFSF13A0A0A6YY99 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC17.26■□□□□ 0.35
TNFSF12-TNFSF13A0A0A6YY99 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC17.26■□□□□ 0.35
TNFSF12-TNFSF13A0A0A6YY99 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
TNFSF12-TNFSF13A0A0A6YY99 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
TNFSF12-TNFSF13A0A0A6YY99 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TNFSF12-TNFSF13A0A0A6YY99 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
TNFSF12-TNFSF13A0A0A6YY99 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TNFSF12-TNFSF13A0A0A6YY99 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
TNFSF12-TNFSF13A0A0A6YY99 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TNFSF12-TNFSF13A0A0A6YY99 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TNFSF12-TNFSF13A0A0A6YY99 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC17.26■□□□□ 0.35
TNFSF12-TNFSF13A0A0A6YY99 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TNFSF12-TNFSF13A0A0A6YY99 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TNFSF12-TNFSF13A0A0A6YY99 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TNFSF12-TNFSF13A0A0A6YY99 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TNFSF12-TNFSF13A0A0A6YY99 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
TNFSF12-TNFSF13A0A0A6YY99 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC17.25■□□□□ 0.35
TNFSF12-TNFSF13A0A0A6YY99 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC17.25■□□□□ 0.35
TNFSF12-TNFSF13A0A0A6YY99 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TNFSF12-TNFSF13A0A0A6YY99 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
TNFSF12-TNFSF13A0A0A6YY99 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC17.25■□□□□ 0.35
TNFSF12-TNFSF13A0A0A6YY99 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC17.25■□□□□ 0.35
TNFSF12-TNFSF13A0A0A6YY99 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
TNFSF12-TNFSF13A0A0A6YY99 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC17.25■□□□□ 0.35
TNFSF12-TNFSF13A0A0A6YY99 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC17.25■□□□□ 0.35
TNFSF12-TNFSF13A0A0A6YY99 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
TNFSF12-TNFSF13A0A0A6YY99 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
TNFSF12-TNFSF13A0A0A6YY99 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC17.25■□□□□ 0.35
TNFSF12-TNFSF13A0A0A6YY99 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TNFSF12-TNFSF13A0A0A6YY99 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TNFSF12-TNFSF13A0A0A6YY99 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TNFSF12-TNFSF13A0A0A6YY99 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TNFSF12-TNFSF13A0A0A6YY99 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TNFSF12-TNFSF13A0A0A6YY99 AC096733.2-201ENST00000609937 1394 ntBASIC17.25■□□□□ 0.35
TNFSF12-TNFSF13A0A0A6YY99 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
TNFSF12-TNFSF13A0A0A6YY99 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
TNFSF12-TNFSF13A0A0A6YY99 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC17.25■□□□□ 0.35
TNFSF12-TNFSF13A0A0A6YY99 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TNFSF12-TNFSF13A0A0A6YY99 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TNFSF12-TNFSF13A0A0A6YY99 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
TNFSF12-TNFSF13A0A0A6YY99 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
TNFSF12-TNFSF13A0A0A6YY99 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
TNFSF12-TNFSF13A0A0A6YY99 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms