Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 RNA5SP239-201ENST00000410218 129 ntBASIC4.9□□□□□ -1.63
RC3H1Q5TC82 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC4.9□□□□□ -1.63
RC3H1Q5TC82 RPS27P1-201ENST00000450552 247 ntBASIC4.9□□□□□ -1.63
RC3H1Q5TC82 AP000705.1-201ENST00000454567 350 ntBASIC4.9□□□□□ -1.63
RC3H1Q5TC82 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC4.9□□□□□ -1.63
RC3H1Q5TC82 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC4.9□□□□□ -1.63
RC3H1Q5TC82 MLLT10P2-201ENST00000506434 249 ntBASIC4.9□□□□□ -1.63
RC3H1Q5TC82 RNU6-772P-201ENST00000516042 105 ntBASIC4.9□□□□□ -1.63
RC3H1Q5TC82 RNU2-12P-201ENST00000517216 168 ntBASIC4.9□□□□□ -1.63
RC3H1Q5TC82 RNA5SP291-201ENST00000517222 105 ntBASIC4.9□□□□□ -1.63
RC3H1Q5TC82 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC4.9□□□□□ -1.63
RC3H1Q5TC82 AC100770.1-201ENST00000532310 322 ntBASIC4.9□□□□□ -1.63
RC3H1Q5TC82 TRAV28-201ENST00000557548 323 ntBASIC4.9□□□□□ -1.63
RC3H1Q5TC82 LINC00933-203ENST00000559812 219 ntBASIC4.9□□□□□ -1.63
RC3H1Q5TC82 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC4.9□□□□□ -1.63
RC3H1Q5TC82 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC4.9□□□□□ -1.63
RC3H1Q5TC82 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC4.9□□□□□ -1.63
RC3H1Q5TC82 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
RC3H1Q5TC82 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC4.89□□□□□ -1.63
RC3H1Q5TC82 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
RC3H1Q5TC82 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
RC3H1Q5TC82 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
RC3H1Q5TC82 Y_RNA.294-201ENST00000364916 102 ntBASIC4.89□□□□□ -1.63
RC3H1Q5TC82 RNU6-969P-201ENST00000383900 105 ntBASIC4.89□□□□□ -1.63
RC3H1Q5TC82 Y_RNA.393-201ENST00000383936 102 ntBASIC4.89□□□□□ -1.63
RC3H1Q5TC82 Y_RNA.495-201ENST00000384435 112 ntBASIC4.89□□□□□ -1.63
RC3H1Q5TC82 Y_RNA.521-201ENST00000384560 114 ntBASIC4.89□□□□□ -1.63
RC3H1Q5TC82 MIR153-1-201ENST00000384914 90 ntBASIC4.89□□□□□ -1.63
RC3H1Q5TC82 MIR218-2-201ENST00000385006 110 ntBASIC4.89□□□□□ -1.63
RC3H1Q5TC82 AL355497.1-201ENST00000406262 551 ntBASIC4.89□□□□□ -1.63
RC3H1Q5TC82 RPS26P42-201ENST00000413485 326 ntBASIC4.89□□□□□ -1.63
RC3H1Q5TC82 RPL26P27-201ENST00000414397 437 ntBASIC4.89□□□□□ -1.63
RC3H1Q5TC82 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC4.89□□□□□ -1.63
RC3H1Q5TC82 AC007969.2-201ENST00000441891 191 ntBASIC4.89□□□□□ -1.63
RC3H1Q5TC82 AC146507.2-201ENST00000460608 476 ntBASIC4.89□□□□□ -1.63
RC3H1Q5TC82 AC091179.3-201ENST00000474761 144 ntBASIC4.89□□□□□ -1.63
RC3H1Q5TC82 Y_RNA.757-201ENST00000578934 114 ntBASIC4.89□□□□□ -1.63
RC3H1Q5TC82 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC4.89□□□□□ -1.63
RC3H1Q5TC82 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
RC3H1Q5TC82 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC4.89□□□□□ -1.63
RC3H1Q5TC82 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
RC3H1Q5TC82 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
RC3H1Q5TC82 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC4.89□□□□□ -1.63
RC3H1Q5TC82 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
RC3H1Q5TC82 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC4.88□□□□□ -1.63
RC3H1Q5TC82 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
RC3H1Q5TC82 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC4.88□□□□□ -1.63
RC3H1Q5TC82 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
RC3H1Q5TC82 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
RC3H1Q5TC82 SNORD56.1-201ENST00000362913 68 ntBASIC4.88□□□□□ -1.63
RC3H1Q5TC82 RNU6-1141P-201ENST00000364520 107 ntBASIC4.88□□□□□ -1.63
RC3H1Q5TC82 Z98749.2-208ENST00000381646 500 ntBASIC4.88□□□□□ -1.63
RC3H1Q5TC82 MIR526A2-201ENST00000390198 65 ntBASIC4.88□□□□□ -1.63
RC3H1Q5TC82 RN7SKP61-201ENST00000410642 295 ntBASIC4.88□□□□□ -1.63
RC3H1Q5TC82 HMGB1P37-201ENST00000439613 609 ntBASIC4.88□□□□□ -1.63
RC3H1Q5TC82 CYCSP35-201ENST00000451978 304 ntBASIC4.88□□□□□ -1.63
RC3H1Q5TC82 Y_RNA.651-201ENST00000459380 103 ntBASIC4.88□□□□□ -1.63
RC3H1Q5TC82 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC4.88□□□□□ -1.63
RC3H1Q5TC82 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC4.88□□□□□ -1.63
RC3H1Q5TC82 AC090132.2-201ENST00000615881 347 ntBASIC4.88□□□□□ -1.63
RC3H1Q5TC82 snoZ196.1-201ENST00000625269 89 ntBASIC4.88□□□□□ -1.63
RC3H1Q5TC82 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC4.88□□□□□ -1.63
RC3H1Q5TC82 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC4.88□□□□□ -1.63
RC3H1Q5TC82 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC4.87□□□□□ -1.63
RC3H1Q5TC82 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
RC3H1Q5TC82 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC4.87□□□□□ -1.63
RC3H1Q5TC82 SNORA72.4-201ENST00000384174 132 ntBASIC4.87□□□□□ -1.63
RC3H1Q5TC82 MIR518D-201ENST00000385014 87 ntBASIC4.87□□□□□ -1.63
RC3H1Q5TC82 SNORA75.5-201ENST00000391291 81 ntBASIC4.87□□□□□ -1.63
RC3H1Q5TC82 NDUFB4P4-201ENST00000404822 243 ntBASIC4.87□□□□□ -1.63
RC3H1Q5TC82 HMGB3P8-201ENST00000449709 577 ntBASIC4.87□□□□□ -1.63
RC3H1Q5TC82 SNORD105B-201ENST00000458770 79 ntBASIC4.87□□□□□ -1.63
RC3H1Q5TC82 RPL23AP14-201ENST00000468281 468 ntBASIC4.87□□□□□ -1.63
RC3H1Q5TC82 AC006517.1-201ENST00000480485 328 ntBASIC4.87□□□□□ -1.63
RC3H1Q5TC82 RPL31P61-201ENST00000496160 376 ntBASIC4.87□□□□□ -1.63
RC3H1Q5TC82 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC4.87□□□□□ -1.63
RC3H1Q5TC82 RNU6-703P-201ENST00000516946 107 ntBASIC4.87□□□□□ -1.63
RC3H1Q5TC82 RNU6-1183P-201ENST00000517054 60 ntBASIC4.87□□□□□ -1.63
RC3H1Q5TC82 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
RC3H1Q5TC82 AC021231.3-201ENST00000558497 370 ntBASIC4.87□□□□□ -1.63
RC3H1Q5TC82 MIR5688-201ENST00000580619 83 ntBASIC4.87□□□□□ -1.63
RC3H1Q5TC82 AL670379.3-201ENST00000605040 251 ntBASIC4.87□□□□□ -1.63
RC3H1Q5TC82 AC019159.1-201ENST00000605094 187 ntBASIC4.87□□□□□ -1.63
RC3H1Q5TC82 PCNP-208ENST00000627393 136 ntTSL 2 BASIC4.87□□□□□ -1.63
RC3H1Q5TC82 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC4.87□□□□□ -1.63
RC3H1Q5TC82 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
RC3H1Q5TC82 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
RC3H1Q5TC82 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
RC3H1Q5TC82 AC008555.8-201ENST00000623602 2168 ntBASIC4.87□□□□□ -1.63
RC3H1Q5TC82 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
RC3H1Q5TC82 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
RC3H1Q5TC82 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC4.86□□□□□ -1.63
RC3H1Q5TC82 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC4.86□□□□□ -1.63
RC3H1Q5TC82 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC4.86□□□□□ -1.63
RC3H1Q5TC82 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
RC3H1Q5TC82 RNU6-1048P-201ENST00000364054 107 ntBASIC4.86□□□□□ -1.63
RC3H1Q5TC82 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
RC3H1Q5TC82 RNU6-32P-201ENST00000383948 107 ntBASIC4.86□□□□□ -1.63
RC3H1Q5TC82 RNU6-13P-201ENST00000384248 107 ntBASIC4.86□□□□□ -1.63
RC3H1Q5TC82 RNU6-12P-201ENST00000384604 107 ntBASIC4.86□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 112.3 ms