Protein–RNA interactions for Protein: P27658

COL8A1, Collagen alpha-1(VIII) chain, humanhuman

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1P27658 AC012314.7-201ENST00000619693 93 ntBASIC3.93□□□□□ -1.78
COL8A1P27658 MIR8059-201ENST00000620427 81 ntBASIC3.93□□□□□ -1.78
COL8A1P27658 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
COL8A1P27658 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC3.93□□□□□ -1.78
COL8A1P27658 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
COL8A1P27658 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
COL8A1P27658 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
COL8A1P27658 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC3.93□□□□□ -1.78
COL8A1P27658 NOL8P1-201ENST00000508336 3529 ntBASIC3.92□□□□□ -1.78
COL8A1P27658 AC027290.2-201ENST00000623210 18662 ntBASIC3.92□□□□□ -1.78
COL8A1P27658 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC3.92□□□□□ -1.78
COL8A1P27658 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC3.92□□□□□ -1.78
COL8A1P27658 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC3.92□□□□□ -1.78
COL8A1P27658 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC3.92□□□□□ -1.78
COL8A1P27658 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
COL8A1P27658 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
COL8A1P27658 AL589743.1-201ENST00000551932 2712 ntBASIC3.92□□□□□ -1.78
COL8A1P27658 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC3.92□□□□□ -1.78
COL8A1P27658 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
COL8A1P27658 Y_RNA.52-201ENST00000362760 96 ntBASIC3.92□□□□□ -1.78
COL8A1P27658 RNU6-1134P-201ENST00000365156 101 ntBASIC3.92□□□□□ -1.78
COL8A1P27658 MIR590-201ENST00000385008 97 ntBASIC3.92□□□□□ -1.78
COL8A1P27658 FTH1P15-201ENST00000406984 280 ntBASIC3.92□□□□□ -1.78
COL8A1P27658 AL500522.2-201ENST00000448562 343 ntBASIC3.92□□□□□ -1.78
COL8A1P27658 RPS29P2-201ENST00000479278 136 ntBASIC3.92□□□□□ -1.78
COL8A1P27658 ATP5EP1-201ENST00000510257 156 ntBASIC3.92□□□□□ -1.78
COL8A1P27658 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC3.92□□□□□ -1.78
COL8A1P27658 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC3.92□□□□□ -1.78
COL8A1P27658 RNA5SP249-201ENST00000516127 99 ntBASIC3.92□□□□□ -1.78
COL8A1P27658 RNU6-109P-201ENST00000516364 107 ntBASIC3.92□□□□□ -1.78
COL8A1P27658 RNU6-184P-201ENST00000516514 107 ntBASIC3.92□□□□□ -1.78
COL8A1P27658 RNA5SP360-201ENST00000516555 118 ntBASIC3.92□□□□□ -1.78
COL8A1P27658 SNORA70.24-201ENST00000517233 118 ntBASIC3.92□□□□□ -1.78
COL8A1P27658 AC026421.1-201ENST00000519101 163 ntBASIC3.92□□□□□ -1.78
COL8A1P27658 MED28P6-201ENST00000558776 231 ntBASIC3.92□□□□□ -1.78
COL8A1P27658 AC025281.1-201ENST00000567026 265 ntBASIC3.92□□□□□ -1.78
COL8A1P27658 MIR3124-201ENST00000582636 67 ntBASIC3.92□□□□□ -1.78
COL8A1P27658 AL021707.8-201ENST00000609428 183 ntBASIC3.92□□□□□ -1.78
COL8A1P27658 AL138880.2-201ENST00000616214 239 ntBASIC3.92□□□□□ -1.78
COL8A1P27658 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC3.92□□□□□ -1.78
COL8A1P27658 BCLAF1P2-201ENST00000624956 2609 ntBASIC3.92□□□□□ -1.78
COL8A1P27658 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
COL8A1P27658 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC3.92□□□□□ -1.78
COL8A1P27658 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC3.92□□□□□ -1.78
COL8A1P27658 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
COL8A1P27658 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC3.91□□□□□ -1.78
COL8A1P27658 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC3.91□□□□□ -1.78
COL8A1P27658 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
COL8A1P27658 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC3.91□□□□□ -1.78
COL8A1P27658 RNA5SP124-201ENST00000362739 110 ntBASIC3.91□□□□□ -1.78
COL8A1P27658 Y_RNA.244-201ENST00000364484 109 ntBASIC3.91□□□□□ -1.78
COL8A1P27658 SNORA73.2-201ENST00000364946 201 ntBASIC3.91□□□□□ -1.78
COL8A1P27658 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC3.91□□□□□ -1.78
COL8A1P27658 Y_RNA.466-201ENST00000384294 113 ntBASIC3.91□□□□□ -1.78
COL8A1P27658 MIR891A-201ENST00000401237 79 ntBASIC3.91□□□□□ -1.78
COL8A1P27658 MIR1255A-201ENST00000408338 113 ntBASIC3.91□□□□□ -1.78
COL8A1P27658 RNA5SP390-201ENST00000410191 113 ntBASIC3.91□□□□□ -1.78
COL8A1P27658 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC3.91□□□□□ -1.78
COL8A1P27658 CALM2P4-201ENST00000430810 426 ntBASIC3.91□□□□□ -1.78
COL8A1P27658 AL133547.1-201ENST00000448546 220 ntBASIC3.91□□□□□ -1.78
COL8A1P27658 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.91□□□□□ -1.78
COL8A1P27658 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC3.91□□□□□ -1.78
COL8A1P27658 AC113403.1-201ENST00000604910 193 ntBASIC3.91□□□□□ -1.78
COL8A1P27658 RNF123-214ENST00000629802 207 ntTSL 5 BASIC3.91□□□□□ -1.78
COL8A1P27658 U2.21-201ENST00000637295 81 ntBASIC3.91□□□□□ -1.78
COL8A1P27658 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
COL8A1P27658 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC3.91□□□□□ -1.78
COL8A1P27658 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
COL8A1P27658 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
COL8A1P27658 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC3.91□□□□□ -1.78
COL8A1P27658 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
COL8A1P27658 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
COL8A1P27658 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC3.91□□□□□ -1.78
COL8A1P27658 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
COL8A1P27658 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
COL8A1P27658 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
COL8A1P27658 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
COL8A1P27658 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC3.9□□□□□ -1.78
COL8A1P27658 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC3.9□□□□□ -1.78
COL8A1P27658 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC3.9□□□□□ -1.78
COL8A1P27658 SNORD114-7-201ENST00000362520 77 ntBASIC3.9□□□□□ -1.79
COL8A1P27658 UBBP2-201ENST00000376781 231 ntBASIC3.9□□□□□ -1.79
COL8A1P27658 MIR518C-201ENST00000384822 101 ntBASIC3.9□□□□□ -1.79
COL8A1P27658 MIR153-1-201ENST00000384914 90 ntBASIC3.9□□□□□ -1.79
COL8A1P27658 RPL23AP52-201ENST00000439311 478 ntBASIC3.9□□□□□ -1.79
COL8A1P27658 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC3.9□□□□□ -1.79
COL8A1P27658 RNU6-437P-201ENST00000459408 95 ntBASIC3.9□□□□□ -1.79
COL8A1P27658 RPL35AP15-201ENST00000468042 339 ntBASIC3.9□□□□□ -1.79
COL8A1P27658 COX6CP6-201ENST00000490840 228 ntBASIC3.9□□□□□ -1.79
COL8A1P27658 AC110768.1-201ENST00000509222 400 ntBASIC3.9□□□□□ -1.79
COL8A1P27658 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC3.9□□□□□ -1.79
COL8A1P27658 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC3.9□□□□□ -1.79
COL8A1P27658 MIR3136-201ENST00000583498 78 ntBASIC3.9□□□□□ -1.79
COL8A1P27658 AC097639.2-201ENST00000603159 172 ntBASIC3.9□□□□□ -1.79
COL8A1P27658 AC096577.2-201ENST00000611455 153 ntBASIC3.9□□□□□ -1.79
COL8A1P27658 MIR8069-1-201ENST00000616627 86 ntBASIC3.9□□□□□ -1.79
COL8A1P27658 MIR8069-2-201ENST00000621412 86 ntBASIC3.9□□□□□ -1.79
COL8A1P27658 AL035470.1-201ENST00000622571 220 ntBASIC3.9□□□□□ -1.79
COL8A1P27658 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC3.9□□□□□ -1.79
COL8A1P27658 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC3.9□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 108.5 ms