Protein–RNA interactions for Protein: O75127

PTCD1, Pentatricopeptide repeat-containing protein 1, mitochondrial, humanhuman

Known RBP Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1O75127 AC021739.1-201ENST00000559631 174 ntBASIC4.54□□□□□ -1.68
PTCD1O75127 MIR5571-201ENST00000577998 113 ntBASIC4.54□□□□□ -1.68
PTCD1O75127 AC037487.3-201ENST00000606668 112 ntBASIC4.54□□□□□ -1.68
PTCD1O75127 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC4.54□□□□□ -1.68
PTCD1O75127 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC4.54□□□□□ -1.68
PTCD1O75127 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
PTCD1O75127 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
PTCD1O75127 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
PTCD1O75127 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
PTCD1O75127 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC4.53□□□□□ -1.68
PTCD1O75127 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC4.53□□□□□ -1.68
PTCD1O75127 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
PTCD1O75127 RNU6-1298P-201ENST00000362456 101 ntBASIC4.53□□□□□ -1.68
PTCD1O75127 Y_RNA.275-201ENST00000364726 110 ntBASIC4.53□□□□□ -1.68
PTCD1O75127 RNU6-281P-201ENST00000384212 103 ntBASIC4.53□□□□□ -1.68
PTCD1O75127 RNU6-159P-201ENST00000391080 106 ntBASIC4.53□□□□□ -1.68
PTCD1O75127 RNU5A-5P-201ENST00000411054 116 ntBASIC4.53□□□□□ -1.68
PTCD1O75127 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC4.53□□□□□ -1.68
PTCD1O75127 AC244670.1-201ENST00000436879 112 ntBASIC4.53□□□□□ -1.68
PTCD1O75127 RPL39P29-201ENST00000447779 157 ntBASIC4.53□□□□□ -1.68
PTCD1O75127 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC4.53□□□□□ -1.68
PTCD1O75127 RNU5F-8P-201ENST00000515941 111 ntBASIC4.53□□□□□ -1.68
PTCD1O75127 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC4.53□□□□□ -1.68
PTCD1O75127 POC1B-211ENST00000549504 581 ntTSL 5 BASIC4.53□□□□□ -1.68
PTCD1O75127 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC4.53□□□□□ -1.68
PTCD1O75127 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
PTCD1O75127 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
PTCD1O75127 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
PTCD1O75127 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
PTCD1O75127 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC4.52□□□□□ -1.69
PTCD1O75127 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC4.52□□□□□ -1.69
PTCD1O75127 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC4.52□□□□□ -1.69
PTCD1O75127 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC4.52□□□□□ -1.69
PTCD1O75127 AC110491.1-201ENST00000562191 2010 ntBASIC4.52□□□□□ -1.69
PTCD1O75127 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
PTCD1O75127 Y_RNA.82-201ENST00000363000 102 ntBASIC4.52□□□□□ -1.69
PTCD1O75127 Y_RNA.92-201ENST00000363043 102 ntBASIC4.52□□□□□ -1.69
PTCD1O75127 Y_RNA.235-201ENST00000364412 102 ntBASIC4.52□□□□□ -1.69
PTCD1O75127 Y_RNA.306-201ENST00000365015 102 ntBASIC4.52□□□□□ -1.69
PTCD1O75127 Y_RNA.308-201ENST00000365043 101 ntBASIC4.52□□□□□ -1.69
PTCD1O75127 Y_RNA.312-201ENST00000365089 102 ntBASIC4.52□□□□□ -1.69
PTCD1O75127 Y_RNA.322-201ENST00000365151 102 ntBASIC4.52□□□□□ -1.69
PTCD1O75127 Y_RNA.590-201ENST00000410140 107 ntBASIC4.52□□□□□ -1.69
PTCD1O75127 RNA5SP239-201ENST00000410218 129 ntBASIC4.52□□□□□ -1.69
PTCD1O75127 RNU2-61P-201ENST00000411069 191 ntBASIC4.52□□□□□ -1.69
PTCD1O75127 RN7SKP53-201ENST00000411337 315 ntBASIC4.52□□□□□ -1.69
PTCD1O75127 BPY2DP-201ENST00000422208 265 ntBASIC4.52□□□□□ -1.69
PTCD1O75127 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC4.52□□□□□ -1.69
PTCD1O75127 Y_RNA.650-201ENST00000459002 102 ntBASIC4.52□□□□□ -1.69
PTCD1O75127 Y_RNA.638-201ENST00000459374 113 ntBASIC4.52□□□□□ -1.69
PTCD1O75127 AC073901.1-201ENST00000462471 408 ntBASIC4.52□□□□□ -1.69
PTCD1O75127 AP001486.1-201ENST00000463339 476 ntBASIC4.52□□□□□ -1.69
PTCD1O75127 RN7SL504P-201ENST00000494496 287 ntBASIC4.52□□□□□ -1.69
PTCD1O75127 RNU6-426P-201ENST00000516464 97 ntBASIC4.52□□□□□ -1.69
PTCD1O75127 Y_RNA.777-201ENST00000516982 102 ntBASIC4.52□□□□□ -1.69
PTCD1O75127 AL391261.3-201ENST00000557194 520 ntBASIC4.52□□□□□ -1.69
PTCD1O75127 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
PTCD1O75127 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC4.52□□□□□ -1.69
PTCD1O75127 Y_RNA.771-201ENST00000598668 102 ntBASIC4.52□□□□□ -1.69
PTCD1O75127 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC4.52□□□□□ -1.69
PTCD1O75127 Xist_exon1.1-201ENST00000618930 85 ntBASIC4.52□□□□□ -1.69
PTCD1O75127 Y_RNA.789-201ENST00000622480 102 ntBASIC4.52□□□□□ -1.69
PTCD1O75127 AP003355.3-201ENST00000623465 114 ntBASIC4.52□□□□□ -1.69
PTCD1O75127 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC4.52□□□□□ -1.69
PTCD1O75127 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC4.52□□□□□ -1.69
PTCD1O75127 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
PTCD1O75127 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC4.51□□□□□ -1.69
PTCD1O75127 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC4.51□□□□□ -1.69
PTCD1O75127 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
PTCD1O75127 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
PTCD1O75127 AC135776.4-201ENST00000624300 1904 ntBASIC4.51□□□□□ -1.69
PTCD1O75127 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC4.51□□□□□ -1.69
PTCD1O75127 Y_RNA.272-201ENST00000364696 102 ntBASIC4.51□□□□□ -1.69
PTCD1O75127 SNORA48.5-201ENST00000391143 135 ntBASIC4.51□□□□□ -1.69
PTCD1O75127 RN7SKP61-201ENST00000410642 295 ntBASIC4.51□□□□□ -1.69
PTCD1O75127 AC010154.1-201ENST00000425857 269 ntBASIC4.51□□□□□ -1.69
PTCD1O75127 AL049873.1-201ENST00000480540 376 ntBASIC4.51□□□□□ -1.69
PTCD1O75127 AP001025.1-201ENST00000486139 332 ntBASIC4.51□□□□□ -1.69
PTCD1O75127 RNU6-1198P-201ENST00000516904 67 ntBASIC4.51□□□□□ -1.69
PTCD1O75127 ACA59.2-201ENST00000517061 156 ntBASIC4.51□□□□□ -1.69
PTCD1O75127 AC006199.1-201ENST00000548728 219 ntBASIC4.51□□□□□ -1.69
PTCD1O75127 AC021231.3-201ENST00000558497 370 ntBASIC4.51□□□□□ -1.69
PTCD1O75127 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC4.51□□□□□ -1.69
PTCD1O75127 MIR3199-2-201ENST00000636243 86 ntBASIC4.51□□□□□ -1.69
PTCD1O75127 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC4.51□□□□□ -1.69
PTCD1O75127 AC007496.3-201ENST00000624987 3443 ntBASIC4.51□□□□□ -1.69
PTCD1O75127 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
PTCD1O75127 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
PTCD1O75127 AL391516.1-201ENST00000554380 2449 ntBASIC4.51□□□□□ -1.69
PTCD1O75127 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC4.5□□□□□ -1.69
PTCD1O75127 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
PTCD1O75127 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
PTCD1O75127 RNU6-626P-201ENST00000363354 107 ntBASIC4.5□□□□□ -1.69
PTCD1O75127 RNA5SP205-201ENST00000364653 136 ntBASIC4.5□□□□□ -1.69
PTCD1O75127 RNU6-326P-201ENST00000365480 107 ntBASIC4.5□□□□□ -1.69
PTCD1O75127 Y_RNA.569-201ENST00000384749 103 ntBASIC4.5□□□□□ -1.69
PTCD1O75127 Y_RNA.580-201ENST00000391004 95 ntBASIC4.5□□□□□ -1.69
PTCD1O75127 RNU6-257P-201ENST00000410238 98 ntBASIC4.5□□□□□ -1.69
PTCD1O75127 Y_RNA.597-201ENST00000410463 100 ntBASIC4.5□□□□□ -1.69
PTCD1O75127 AC078809.1-201ENST00000427601 140 ntBASIC4.5□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 121.4 ms