Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
VARS2Q5ST30 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC5.05□□□□□ -1.6
VARS2Q5ST30 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
VARS2Q5ST30 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC5.05□□□□□ -1.6
VARS2Q5ST30 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
VARS2Q5ST30 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
VARS2Q5ST30 Y_RNA.203-201ENST00000364106 102 ntBASIC5.05□□□□□ -1.6
VARS2Q5ST30 RNU1-73P-201ENST00000383971 164 ntBASIC5.05□□□□□ -1.6
VARS2Q5ST30 CYCSP48-201ENST00000417124 323 ntBASIC5.05□□□□□ -1.6
VARS2Q5ST30 AC245291.1-201ENST00000419501 328 ntBASIC5.05□□□□□ -1.6
VARS2Q5ST30 RPL35AP21-201ENST00000437667 333 ntBASIC5.05□□□□□ -1.6
VARS2Q5ST30 MIR3163-201ENST00000581592 73 ntBASIC5.05□□□□□ -1.6
VARS2Q5ST30 MIR4668-201ENST00000582284 70 ntBASIC5.05□□□□□ -1.6
VARS2Q5ST30 MIR6716-201ENST00000613413 80 ntBASIC5.05□□□□□ -1.6
VARS2Q5ST30 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC5.05□□□□□ -1.6
VARS2Q5ST30 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC5.05□□□□□ -1.6
VARS2Q5ST30 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
VARS2Q5ST30 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC5.05□□□□□ -1.6
VARS2Q5ST30 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC5.05□□□□□ -1.6
VARS2Q5ST30 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC5.05□□□□□ -1.6
VARS2Q5ST30 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
VARS2Q5ST30 A2MP1-204ENST00000566278 4130 ntBASIC5.04□□□□□ -1.6
VARS2Q5ST30 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
VARS2Q5ST30 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC5.04□□□□□ -1.6
VARS2Q5ST30 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
VARS2Q5ST30 Y_RNA.298-201ENST00000364960 107 ntBASIC5.04□□□□□ -1.6
VARS2Q5ST30 TRAJ42-201ENST00000390495 66 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
VARS2Q5ST30 RNA5SP397-201ENST00000391323 118 ntBASIC5.04□□□□□ -1.6
VARS2Q5ST30 MIR1185-2-201ENST00000408687 86 ntBASIC5.04□□□□□ -1.6
VARS2Q5ST30 Y_RNA.607-201ENST00000410597 98 ntBASIC5.04□□□□□ -1.6
VARS2Q5ST30 Y_RNA.611-201ENST00000410682 108 ntBASIC5.04□□□□□ -1.6
VARS2Q5ST30 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC5.04□□□□□ -1.6
VARS2Q5ST30 RPL37P4-201ENST00000448908 268 ntBASIC5.04□□□□□ -1.6
VARS2Q5ST30 AC012308.1-201ENST00000451232 178 ntBASIC5.04□□□□□ -1.6
VARS2Q5ST30 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC5.04□□□□□ -1.6
VARS2Q5ST30 RNU2-44P-201ENST00000516795 194 ntBASIC5.04□□□□□ -1.6
VARS2Q5ST30 AC105129.1-201ENST00000560250 297 ntBASIC5.04□□□□□ -1.6
VARS2Q5ST30 MIR548Z-201ENST00000584743 97 ntBASIC5.04□□□□□ -1.6
VARS2Q5ST30 YPEL5P2-201ENST00000605553 359 ntBASIC5.04□□□□□ -1.6
VARS2Q5ST30 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
VARS2Q5ST30 AC126323.6-202ENST00000568092 3511 ntBASIC5.04□□□□□ -1.6
VARS2Q5ST30 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC5.04□□□□□ -1.6
VARS2Q5ST30 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
VARS2Q5ST30 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
VARS2Q5ST30 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC5.04□□□□□ -1.6
VARS2Q5ST30 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC5.03□□□□□ -1.6
VARS2Q5ST30 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
VARS2Q5ST30 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC5.03□□□□□ -1.6
VARS2Q5ST30 Y_RNA.4-201ENST00000362333 112 ntBASIC5.03□□□□□ -1.6
VARS2Q5ST30 RNU6-271P-201ENST00000363858 105 ntBASIC5.03□□□□□ -1.6
VARS2Q5ST30 RNU6-409P-201ENST00000384114 104 ntBASIC5.03□□□□□ -1.6
VARS2Q5ST30 AC104333.2-201ENST00000422630 192 ntBASIC5.03□□□□□ -1.6
VARS2Q5ST30 AC092047.1-201ENST00000424997 240 ntBASIC5.03□□□□□ -1.6
VARS2Q5ST30 VDAC1P3-201ENST00000434069 851 ntBASIC5.03□□□□□ -1.6
VARS2Q5ST30 SUMO2P16-201ENST00000519475 264 ntBASIC5.03□□□□□ -1.6
VARS2Q5ST30 AC007224.1-201ENST00000564410 144 ntBASIC5.03□□□□□ -1.6
VARS2Q5ST30 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC5.03□□□□□ -1.6
VARS2Q5ST30 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC5.03□□□□□ -1.6
VARS2Q5ST30 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
VARS2Q5ST30 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
VARS2Q5ST30 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
VARS2Q5ST30 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC5.03□□□□□ -1.6
VARS2Q5ST30 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC5.02□□□□□ -1.61
VARS2Q5ST30 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC5.02□□□□□ -1.61
VARS2Q5ST30 RNU6-600P-201ENST00000362524 99 ntBASIC5.02□□□□□ -1.61
VARS2Q5ST30 Y_RNA.96-201ENST00000363092 109 ntBASIC5.02□□□□□ -1.61
VARS2Q5ST30 Y_RNA.796-201ENST00000364268 102 ntBASIC5.02□□□□□ -1.61
VARS2Q5ST30 Y_RNA.799-201ENST00000364992 102 ntBASIC5.02□□□□□ -1.61
VARS2Q5ST30 Y_RNA.316-201ENST00000365118 111 ntBASIC5.02□□□□□ -1.61
VARS2Q5ST30 RNU6-1280P-201ENST00000365211 107 ntBASIC5.02□□□□□ -1.61
VARS2Q5ST30 MIR129-1-201ENST00000384972 72 ntBASIC5.02□□□□□ -1.61
VARS2Q5ST30 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC5.02□□□□□ -1.61
VARS2Q5ST30 AL353705.1-201ENST00000433468 480 ntBASIC5.02□□□□□ -1.61
VARS2Q5ST30 AC096725.1-201ENST00000514266 313 ntBASIC5.02□□□□□ -1.61
VARS2Q5ST30 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC5.02□□□□□ -1.61
VARS2Q5ST30 MIR4694-201ENST00000578534 80 ntBASIC5.02□□□□□ -1.61
VARS2Q5ST30 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC5.02□□□□□ -1.61
VARS2Q5ST30 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
VARS2Q5ST30 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC5.02□□□□□ -1.61
VARS2Q5ST30 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
VARS2Q5ST30 ZFRP1-201ENST00000457579 2970 ntBASIC5.01□□□□□ -1.61
VARS2Q5ST30 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
VARS2Q5ST30 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC5.01□□□□□ -1.61
VARS2Q5ST30 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC5.01□□□□□ -1.61
VARS2Q5ST30 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
VARS2Q5ST30 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC5.01□□□□□ -1.61
VARS2Q5ST30 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
VARS2Q5ST30 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC5.01□□□□□ -1.61
VARS2Q5ST30 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
VARS2Q5ST30 ACEA_U3.1-201ENST00000363057 217 ntBASIC5.01□□□□□ -1.61
VARS2Q5ST30 RNU6-944P-201ENST00000364023 107 ntBASIC5.01□□□□□ -1.61
VARS2Q5ST30 RNU6-690P-201ENST00000365242 106 ntBASIC5.01□□□□□ -1.61
VARS2Q5ST30 AL359837.1-201ENST00000381357 287 ntBASIC5.01□□□□□ -1.61
VARS2Q5ST30 SNORA37-201ENST00000384504 129 ntBASIC5.01□□□□□ -1.61
VARS2Q5ST30 RNU6-1104P-201ENST00000384723 104 ntBASIC5.01□□□□□ -1.61
VARS2Q5ST30 MIR134-201ENST00000385258 73 ntBASIC5.01□□□□□ -1.61
VARS2Q5ST30 AL031121.1-201ENST00000406553 254 ntBASIC5.01□□□□□ -1.61
VARS2Q5ST30 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC5.01□□□□□ -1.61
VARS2Q5ST30 AC245102.2-201ENST00000448956 180 ntBASIC5.01□□□□□ -1.61
VARS2Q5ST30 AC107626.1-201ENST00000471084 183 ntBASIC5.01□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 110.8 ms