Protein–RNA interactions for Protein: O75534

CSDE1, Cold shock domain-containing protein E1, humanhuman

Known RBP Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1O75534 RNU4-20P-201ENST00000365601 151 ntBASIC2.14□□□□□ -2.07
CSDE1O75534 MIR186-201ENST00000384988 86 ntBASIC2.14□□□□□ -2.07
CSDE1O75534 5S_rRNA.2-201ENST00000391293 112 ntBASIC2.14□□□□□ -2.07
CSDE1O75534 AL445685.2-201ENST00000422551 342 ntBASIC2.14□□□□□ -2.07
CSDE1O75534 RPL23AP7-203ENST00000449021 469 ntBASIC2.14□□□□□ -2.07
CSDE1O75534 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC2.14□□□□□ -2.07
CSDE1O75534 Y_RNA.638-201ENST00000459374 113 ntBASIC2.14□□□□□ -2.07
CSDE1O75534 RNU2-53P-201ENST00000516257 147 ntBASIC2.14□□□□□ -2.07
CSDE1O75534 RNU1-40P-201ENST00000516816 164 ntBASIC2.14□□□□□ -2.07
CSDE1O75534 RNU1-97P-201ENST00000516872 164 ntBASIC2.14□□□□□ -2.07
CSDE1O75534 AC109479.2-201ENST00000517842 174 ntBASIC2.14□□□□□ -2.07
CSDE1O75534 CYCSP26-201ENST00000534107 320 ntBASIC2.14□□□□□ -2.07
CSDE1O75534 AC090115.3-201ENST00000553218 849 ntBASIC2.14□□□□□ -2.07
CSDE1O75534 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC2.14□□□□□ -2.07
CSDE1O75534 EIF1P4-201ENST00000572664 335 ntBASIC2.14□□□□□ -2.07
CSDE1O75534 RPL30P11-203ENST00000598995 310 ntBASIC2.14□□□□□ -2.07
CSDE1O75534 AC107304.1-201ENST00000604229 296 ntBASIC2.14□□□□□ -2.07
CSDE1O75534 AL670379.2-201ENST00000604983 252 ntBASIC2.14□□□□□ -2.07
CSDE1O75534 BNIP3P10-201ENST00000605360 577 ntBASIC2.14□□□□□ -2.07
CSDE1O75534 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC2.14□□□□□ -2.07
CSDE1O75534 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
CSDE1O75534 RNU6-428P-201ENST00000362942 107 ntBASIC2.13□□□□□ -2.07
CSDE1O75534 RNU6-105P-201ENST00000363909 104 ntBASIC2.13□□□□□ -2.07
CSDE1O75534 U3.13-201ENST00000364804 214 ntBASIC2.13□□□□□ -2.07
CSDE1O75534 Y_RNA.378-201ENST00000365652 113 ntBASIC2.13□□□□□ -2.07
CSDE1O75534 RNU6-38P-201ENST00000384085 107 ntBASIC2.13□□□□□ -2.07
CSDE1O75534 RNU6-1215P-201ENST00000384441 102 ntBASIC2.13□□□□□ -2.07
CSDE1O75534 MIR561-201ENST00000385216 97 ntBASIC2.13□□□□□ -2.07
CSDE1O75534 RNA5SP213-201ENST00000391031 106 ntBASIC2.13□□□□□ -2.07
CSDE1O75534 RNU6-648P-201ENST00000410190 107 ntBASIC2.13□□□□□ -2.07
CSDE1O75534 RNA5SP390-201ENST00000410191 113 ntBASIC2.13□□□□□ -2.07
CSDE1O75534 RNU6-1068P-201ENST00000410958 103 ntBASIC2.13□□□□□ -2.07
CSDE1O75534 POLHP1-201ENST00000411806 470 ntBASIC2.13□□□□□ -2.07
CSDE1O75534 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC2.13□□□□□ -2.07
CSDE1O75534 MTND3P21-201ENST00000433774 331 ntBASIC2.13□□□□□ -2.07
CSDE1O75534 AL021397.1-201ENST00000451806 248 ntBASIC2.13□□□□□ -2.07
CSDE1O75534 MTND3P16-201ENST00000452205 344 ntBASIC2.13□□□□□ -2.07
CSDE1O75534 RNU6-333P-201ENST00000459117 107 ntBASIC2.13□□□□□ -2.07
CSDE1O75534 SNRPGP7-201ENST00000469016 106 ntBASIC2.13□□□□□ -2.07
CSDE1O75534 AC087884.1-201ENST00000469738 328 ntBASIC2.13□□□□□ -2.07
CSDE1O75534 RPL23AP42-201ENST00000471152 471 ntBASIC2.13□□□□□ -2.07
CSDE1O75534 AK3P2-201ENST00000507976 429 ntBASIC2.13□□□□□ -2.07
CSDE1O75534 NAF1-205ENST00000509434 385 ntTSL 3 BASIC2.13□□□□□ -2.07
CSDE1O75534 CYCSP27-201ENST00000527643 293 ntBASIC2.13□□□□□ -2.07
CSDE1O75534 OR11H5P-201ENST00000554039 926 ntBASIC2.13□□□□□ -2.07
CSDE1O75534 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC2.13□□□□□ -2.07
CSDE1O75534 MIR3935-201ENST00000583472 104 ntBASIC2.13□□□□□ -2.07
CSDE1O75534 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC2.13□□□□□ -2.07
CSDE1O75534 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC2.13□□□□□ -2.07
CSDE1O75534 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
CSDE1O75534 DUXAP9-208ENST00000622815 614 ntBASIC2.13□□□□□ -2.07
CSDE1O75534 AC007792.1-201ENST00000623023 402 ntBASIC2.13□□□□□ -2.07
CSDE1O75534 AC090517.3-201ENST00000625170 141 ntBASIC2.13□□□□□ -2.07
CSDE1O75534 AC068137.4-201ENST00000638485 296 ntBASIC2.13□□□□□ -2.07
CSDE1O75534 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
CSDE1O75534 ATP8A2P2-201ENST00000437678 1568 ntBASIC2.12□□□□□ -2.07
CSDE1O75534 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
CSDE1O75534 RNU6-655P-201ENST00000362858 107 ntBASIC2.12□□□□□ -2.07
CSDE1O75534 RNU6-827P-201ENST00000365553 106 ntBASIC2.12□□□□□ -2.07
CSDE1O75534 MIR583-201ENST00000384846 75 ntBASIC2.12□□□□□ -2.07
CSDE1O75534 MIR544A-201ENST00000384855 91 ntBASIC2.12□□□□□ -2.07
CSDE1O75534 MIR181A1-201ENST00000385026 110 ntBASIC2.12□□□□□ -2.07
CSDE1O75534 AC019129.1-201ENST00000403786 261 ntBASIC2.12□□□□□ -2.07
CSDE1O75534 AL355497.1-201ENST00000406262 551 ntBASIC2.12□□□□□ -2.07
CSDE1O75534 RNU2-23P-201ENST00000410545 195 ntBASIC2.12□□□□□ -2.07
CSDE1O75534 RNU6-293P-201ENST00000411259 106 ntBASIC2.12□□□□□ -2.07
CSDE1O75534 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC2.12□□□□□ -2.07
CSDE1O75534 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC2.12□□□□□ -2.07
CSDE1O75534 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC2.12□□□□□ -2.07
CSDE1O75534 RPL39P29-201ENST00000447779 157 ntBASIC2.12□□□□□ -2.07
CSDE1O75534 SNORA14.1-201ENST00000516113 141 ntBASIC2.12□□□□□ -2.07
CSDE1O75534 SNORD60.2-201ENST00000516883 86 ntBASIC2.12□□□□□ -2.07
CSDE1O75534 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC2.12□□□□□ -2.07
CSDE1O75534 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC2.12□□□□□ -2.07
CSDE1O75534 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC2.12□□□□□ -2.07
CSDE1O75534 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC2.12□□□□□ -2.07
CSDE1O75534 AL118558.2-201ENST00000556294 238 ntBASIC2.12□□□□□ -2.07
CSDE1O75534 MIR4448-201ENST00000584360 86 ntBASIC2.12□□□□□ -2.07
CSDE1O75534 AC078899.2-201ENST00000595282 212 ntBASIC2.12□□□□□ -2.07
CSDE1O75534 AC092807.2-201ENST00000609367 243 ntBASIC2.12□□□□□ -2.07
CSDE1O75534 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC2.12□□□□□ -2.07
CSDE1O75534 OR4G1P-203ENST00000641984 1631 ntBASIC2.12□□□□□ -2.07
CSDE1O75534 AC002543.1-201ENST00000299783 1954 ntBASIC2.12□□□□□ -2.07
CSDE1O75534 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC2.12□□□□□ -2.07
CSDE1O75534 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC2.11□□□□□ -2.07
CSDE1O75534 RNU1-72P-201ENST00000362976 153 ntBASIC2.11□□□□□ -2.07
CSDE1O75534 RNU6-1090P-201ENST00000364065 94 ntBASIC2.11□□□□□ -2.07
CSDE1O75534 Y_RNA.516-201ENST00000384541 124 ntBASIC2.11□□□□□ -2.07
CSDE1O75534 RNU2-40P-201ENST00000410833 196 ntBASIC2.11□□□□□ -2.07
CSDE1O75534 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC2.11□□□□□ -2.07
CSDE1O75534 ARL5AP1-201ENST00000418991 388 ntBASIC2.11□□□□□ -2.07
CSDE1O75534 AC008267.5-201ENST00000424928 265 ntBASIC2.11□□□□□ -2.07
CSDE1O75534 SRIP2-201ENST00000428470 166 ntBASIC2.11□□□□□ -2.07
CSDE1O75534 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC2.11□□□□□ -2.07
CSDE1O75534 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC2.11□□□□□ -2.07
CSDE1O75534 TRAPPC2P3-201ENST00000443200 321 ntBASIC2.11□□□□□ -2.07
CSDE1O75534 AC007677.1-201ENST00000445757 515 ntBASIC2.11□□□□□ -2.07
CSDE1O75534 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC2.11□□□□□ -2.07
CSDE1O75534 RNU7-138P-201ENST00000459479 64 ntBASIC2.11□□□□□ -2.07
CSDE1O75534 Y_RNA.654-201ENST00000497848 106 ntBASIC2.11□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 135 ms