Protein–RNA interactions for Protein: O43316

PAX4, Paired box protein Pax-4, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAX4O43316 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
PAX4O43316 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
PAX4O43316 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
PAX4O43316 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC3.4□□□□□ -1.86
PAX4O43316 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC3.4□□□□□ -1.86
PAX4O43316 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC3.4□□□□□ -1.86
PAX4O43316 AL133412.1-201ENST00000380194 2992 ntBASIC3.4□□□□□ -1.86
PAX4O43316 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC3.4□□□□□ -1.86
PAX4O43316 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
PAX4O43316 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC3.4□□□□□ -1.86
PAX4O43316 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC3.4□□□□□ -1.86
PAX4O43316 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC3.4□□□□□ -1.86
PAX4O43316 Y_RNA.10-201ENST00000362371 110 ntBASIC3.4□□□□□ -1.87
PAX4O43316 RN7SKP104-201ENST00000362605 328 ntBASIC3.4□□□□□ -1.87
PAX4O43316 RNU6-170P-201ENST00000362832 104 ntBASIC3.4□□□□□ -1.87
PAX4O43316 Y_RNA.66-201ENST00000362862 102 ntBASIC3.4□□□□□ -1.87
PAX4O43316 SNORA33-201ENST00000363664 130 ntBASIC3.4□□□□□ -1.87
PAX4O43316 UBBP2-201ENST00000376781 231 ntBASIC3.4□□□□□ -1.87
PAX4O43316 RNU6-987P-201ENST00000384759 104 ntBASIC3.4□□□□□ -1.87
PAX4O43316 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
PAX4O43316 SNORA26.3-201ENST00000391119 136 ntBASIC3.4□□□□□ -1.87
PAX4O43316 RNA5SP496-201ENST00000391240 109 ntBASIC3.4□□□□□ -1.87
PAX4O43316 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.87
PAX4O43316 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC3.4□□□□□ -1.87
PAX4O43316 AC119751.6-201ENST00000416712 186 ntBASIC3.4□□□□□ -1.87
PAX4O43316 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC3.4□□□□□ -1.87
PAX4O43316 AC092017.2-201ENST00000427600 362 ntBASIC3.4□□□□□ -1.87
PAX4O43316 AC000111.2-201ENST00000448200 210 ntBASIC3.4□□□□□ -1.87
PAX4O43316 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
PAX4O43316 PPIAP21-201ENST00000464473 501 ntBASIC3.4□□□□□ -1.87
PAX4O43316 APOA2-207ENST00000470459 416 ntTSL 5 BASIC3.4□□□□□ -1.87
PAX4O43316 RN7SL558P-201ENST00000497468 299 ntBASIC3.4□□□□□ -1.87
PAX4O43316 ENPP7P9-201ENST00000514456 627 ntBASIC3.4□□□□□ -1.87
PAX4O43316 RNA5SP497-201ENST00000516081 97 ntBASIC3.4□□□□□ -1.87
PAX4O43316 RNU6-523P-201ENST00000516304 54 ntBASIC3.4□□□□□ -1.87
PAX4O43316 RNU6-1337P-201ENST00000516525 95 ntBASIC3.4□□□□□ -1.87
PAX4O43316 RNU1-117P-201ENST00000517041 158 ntBASIC3.4□□□□□ -1.87
PAX4O43316 AC008033.2-201ENST00000542626 177 ntBASIC3.4□□□□□ -1.87
PAX4O43316 AC022523.2-201ENST00000561045 150 ntBASIC3.4□□□□□ -1.87
PAX4O43316 AL365205.2-201ENST00000594586 68 ntBASIC3.4□□□□□ -1.87
PAX4O43316 AC019159.1-201ENST00000605094 187 ntBASIC3.4□□□□□ -1.87
PAX4O43316 AL356157.2-201ENST00000605122 111 ntBASIC3.4□□□□□ -1.87
PAX4O43316 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC3.4□□□□□ -1.87
PAX4O43316 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
PAX4O43316 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
PAX4O43316 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC3.4□□□□□ -1.87
PAX4O43316 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC3.4□□□□□ -1.87
PAX4O43316 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
PAX4O43316 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC3.4□□□□□ -1.87
PAX4O43316 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
PAX4O43316 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC3.4□□□□□ -1.87
PAX4O43316 AC125257.1-201ENST00000560400 2930 ntBASIC3.4□□□□□ -1.87
PAX4O43316 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
PAX4O43316 FAM35CP-201ENST00000554755 2470 ntBASIC3.39□□□□□ -1.87
PAX4O43316 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC3.39□□□□□ -1.87
PAX4O43316 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC3.39□□□□□ -1.87
PAX4O43316 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC3.39□□□□□ -1.87
PAX4O43316 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC3.39□□□□□ -1.87
PAX4O43316 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
PAX4O43316 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
PAX4O43316 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC3.39□□□□□ -1.87
PAX4O43316 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC3.39□□□□□ -1.87
PAX4O43316 AC007256.1-201ENST00000392253 2765 ntBASIC3.39□□□□□ -1.87
PAX4O43316 BCLAF1P2-201ENST00000624956 2609 ntBASIC3.39□□□□□ -1.87
PAX4O43316 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
PAX4O43316 RNU6-590P-201ENST00000365039 107 ntBASIC3.39□□□□□ -1.87
PAX4O43316 MIR548D2-201ENST00000384955 97 ntBASIC3.39□□□□□ -1.87
PAX4O43316 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
PAX4O43316 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC3.39□□□□□ -1.87
PAX4O43316 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC3.39□□□□□ -1.87
PAX4O43316 AC004941.2-201ENST00000427009 228 ntBASIC3.39□□□□□ -1.87
PAX4O43316 RPL23AP56-201ENST00000460778 453 ntBASIC3.39□□□□□ -1.87
PAX4O43316 RN7SL610P-201ENST00000463845 291 ntBASIC3.39□□□□□ -1.87
PAX4O43316 SNORD116-26-201ENST00000516006 96 ntBASIC3.39□□□□□ -1.87
PAX4O43316 RNU1-6P-201ENST00000516290 144 ntBASIC3.39□□□□□ -1.87
PAX4O43316 RNU6-1256P-201ENST00000516539 103 ntBASIC3.39□□□□□ -1.87
PAX4O43316 RNU6ATAC12P-201ENST00000516542 115 ntBASIC3.39□□□□□ -1.87
PAX4O43316 RNU6-1149P-201ENST00000516810 97 ntBASIC3.39□□□□□ -1.87
PAX4O43316 RN7SKP209-201ENST00000516888 304 ntBASIC3.39□□□□□ -1.87
PAX4O43316 RNU6-1183P-201ENST00000517054 60 ntBASIC3.39□□□□□ -1.87
PAX4O43316 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC3.39□□□□□ -1.87
PAX4O43316 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC3.39□□□□□ -1.87
PAX4O43316 MIR3934-201ENST00000579806 107 ntBASIC3.39□□□□□ -1.87
PAX4O43316 AC105245.1-201ENST00000581934 244 ntBASIC3.39□□□□□ -1.87
PAX4O43316 MIR4668-201ENST00000582284 70 ntBASIC3.39□□□□□ -1.87
PAX4O43316 FAM27B-201ENST00000610601 213 ntBASIC3.39□□□□□ -1.87
PAX4O43316 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC3.39□□□□□ -1.87
PAX4O43316 MIR6719-201ENST00000622428 87 ntBASIC3.39□□□□□ -1.87
PAX4O43316 AC002064.3-201ENST00000623448 346 ntBASIC3.39□□□□□ -1.87
PAX4O43316 AL162726.3-218ENST00000636401 95 ntBASIC3.39□□□□□ -1.87
PAX4O43316 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC3.39□□□□□ -1.87
PAX4O43316 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
PAX4O43316 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
PAX4O43316 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
PAX4O43316 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
PAX4O43316 MAPK10-286ENST00000641208 8747 ntBASIC3.39□□□□□ -1.87
PAX4O43316 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC3.39□□□□□ -1.87
PAX4O43316 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
PAX4O43316 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC3.39□□□□□ -1.87
PAX4O43316 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 106.8 ms