Protein–RNA interactions for Protein: Q9BYR6

KRTAP3-3, Keratin-associated protein 3-3, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-3Q9BYR6 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
KRTAP3-3Q9BYR6 NBPF12-203ENST00000611443 5594 ntTSL 5 BASIC3.31□□□□□ -1.88
KRTAP3-3Q9BYR6 SEC62-201ENST00000337002 6568 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
KRTAP3-3Q9BYR6 TNRC6A-202ENST00000395799 8438 ntAPPRIS P3 TSL 5 BASIC3.31□□□□□ -1.88
KRTAP3-3Q9BYR6 BDNF-211ENST00000439476 4532 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
KRTAP3-3Q9BYR6 SSH2-204ENST00000540801 4538 ntAPPRIS ALT2 TSL 2 BASIC3.31□□□□□ -1.88
KRTAP3-3Q9BYR6 NBPF12-206ENST00000617844 6326 ntAPPRIS P2 TSL 5 BASIC3.31□□□□□ -1.88
KRTAP3-3Q9BYR6 NAV3-202ENST00000536525 7386 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
KRTAP3-3Q9BYR6 SPEF2-202ENST00000356031 5681 ntAPPRIS P2 TSL 1 (best) BASIC3.31□□□□□ -1.88
KRTAP3-3Q9BYR6 PCDH15-230ENST00000617051 7048 ntTSL 5 BASIC3.31□□□□□ -1.88
KRTAP3-3Q9BYR6 MDM4-205ENST00000391947 10008 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
KRTAP3-3Q9BYR6 NCOR1-204ENST00000395851 7950 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
KRTAP3-3Q9BYR6 ZNF493-203ENST00000392288 5023 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
KRTAP3-3Q9BYR6 KIAA0232-202ENST00000425103 7771 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
KRTAP3-3Q9BYR6 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
KRTAP3-3Q9BYR6 CORIN-211ENST00000610355 4696 ntTSL 5 BASIC3.31□□□□□ -1.88
KRTAP3-3Q9BYR6 CEP120-202ENST00000306481 4629 ntTSL 5 BASIC3.31□□□□□ -1.88
KRTAP3-3Q9BYR6 RASSF9-201ENST00000361228 5682 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
KRTAP3-3Q9BYR6 CFAP57-208ENST00000610710 4162 ntTSL 5 BASIC3.3□□□□□ -1.88
KRTAP3-3Q9BYR6 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC3.3□□□□□ -1.88
KRTAP3-3Q9BYR6 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
KRTAP3-3Q9BYR6 PUM1-207ENST00000440538 3936 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
KRTAP3-3Q9BYR6 MPP5-204ENST00000555925 5006 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
KRTAP3-3Q9BYR6 AL121594.3-201ENST00000557565 3857 ntAPPRIS P1 TSL 2 BASIC3.3□□□□□ -1.88
KRTAP3-3Q9BYR6 C1orf132-203ENST00000608023 15145 ntTSL 5 BASIC3.3□□□□□ -1.88
KRTAP3-3Q9BYR6 AC116366.3-205ENST00000640655 8032 ntAPPRIS ALT2 TSL 5 BASIC3.3□□□□□ -1.88
KRTAP3-3Q9BYR6 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC3.3□□□□□ -1.88
KRTAP3-3Q9BYR6 MAPK10-253ENST00000641010 4072 ntBASIC3.3□□□□□ -1.88
KRTAP3-3Q9BYR6 TAF1-203ENST00000373790 7629 ntAPPRIS ALT2 TSL 1 (best) BASIC3.3□□□□□ -1.88
KRTAP3-3Q9BYR6 ZNF407-202ENST00000309902 5595 ntTSL 2 BASIC3.3□□□□□ -1.88
KRTAP3-3Q9BYR6 FAUP2-201ENST00000394301 401 ntBASIC3.3□□□□□ -1.88
KRTAP3-3Q9BYR6 HMGA1P8-201ENST00000414130 321 ntBASIC3.3□□□□□ -1.88
KRTAP3-3Q9BYR6 AL139132.1-201ENST00000431587 344 ntBASIC3.3□□□□□ -1.88
KRTAP3-3Q9BYR6 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC3.3□□□□□ -1.88
KRTAP3-3Q9BYR6 MIR514B-201ENST00000516774 80 ntBASIC3.3□□□□□ -1.88
KRTAP3-3Q9BYR6 MIR3169-201ENST00000578032 83 ntBASIC3.3□□□□□ -1.88
KRTAP3-3Q9BYR6 MIR548V-201ENST00000584165 80 ntBASIC3.3□□□□□ -1.88
KRTAP3-3Q9BYR6 AC005726.5-201ENST00000585189 298 ntTSL 5 BASIC3.3□□□□□ -1.88
KRTAP3-3Q9BYR6 ZNF549-204ENST00000602149 5505 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
KRTAP3-3Q9BYR6 AC097467.4-201ENST00000605504 141 ntBASIC3.3□□□□□ -1.88
KRTAP3-3Q9BYR6 AL161420.1-201ENST00000619393 264 ntBASIC3.3□□□□□ -1.88
KRTAP3-3Q9BYR6 Six3os1_1.1-201ENST00000620900 87 ntBASIC3.3□□□□□ -1.88
KRTAP3-3Q9BYR6 AL513423.1-201ENST00000621695 132 ntBASIC3.3□□□□□ -1.88
KRTAP3-3Q9BYR6 AC009093.8-201ENST00000641769 292 ntBASIC3.3□□□□□ -1.88
KRTAP3-3Q9BYR6 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC3.3□□□□□ -1.88
KRTAP3-3Q9BYR6 GAPVD1-203ENST00000312123 4320 ntAPPRIS ALT1 TSL 1 (best) BASIC3.3□□□□□ -1.88
KRTAP3-3Q9BYR6 FAT2-201ENST00000261800 14534 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
KRTAP3-3Q9BYR6 SMC1A-201ENST00000322213 9784 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
KRTAP3-3Q9BYR6 ERAP2-202ENST00000437043 5705 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
KRTAP3-3Q9BYR6 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC3.3□□□□□ -1.88
KRTAP3-3Q9BYR6 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC3.3□□□□□ -1.88
KRTAP3-3Q9BYR6 DNAH10-210ENST00000638045 13678 ntAPPRIS P2 TSL 5 BASIC3.3□□□□□ -1.88
KRTAP3-3Q9BYR6 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC3.3□□□□□ -1.88
KRTAP3-3Q9BYR6 KIF13A-205ENST00000378843 5707 ntAPPRIS ALT2 TSL 1 (best) BASIC3.3□□□□□ -1.88
KRTAP3-3Q9BYR6 ADGRL3-206ENST00000507164 4982 ntTSL 5 BASIC3.3□□□□□ -1.88
KRTAP3-3Q9BYR6 ADCY10-205ENST00000545172 4966 ntTSL 2 BASIC3.3□□□□□ -1.88
KRTAP3-3Q9BYR6 LINC01684-203ENST00000453784 2908 ntTSL 2 BASIC3.3□□□□□ -1.88
KRTAP3-3Q9BYR6 HYDIN-206ENST00000393567 15719 ntAPPRIS ALT2 TSL 5 BASIC3.3□□□□□ -1.88
KRTAP3-3Q9BYR6 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC3.29□□□□□ -1.88
KRTAP3-3Q9BYR6 MSH6-209ENST00000538136 4055 ntTSL 2 BASIC3.29□□□□□ -1.88
KRTAP3-3Q9BYR6 GREM1-203ENST00000622074 14606 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
KRTAP3-3Q9BYR6 GON4L-201ENST00000271883 7138 ntAPPRIS P3 TSL 5 BASIC3.29□□□□□ -1.88
KRTAP3-3Q9BYR6 ZNF254-206ENST00000611359 3982 ntTSL 3 BASIC3.29□□□□□ -1.88
KRTAP3-3Q9BYR6 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC3.29□□□□□ -1.88
KRTAP3-3Q9BYR6 PDZD2-202ENST00000438447 11704 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
KRTAP3-3Q9BYR6 ZNF107-206ENST00000620827 5685 ntAPPRIS P4 TSL 4 BASIC3.29□□□□□ -1.88
KRTAP3-3Q9BYR6 RCAN2-201ENST00000306764 3240 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
KRTAP3-3Q9BYR6 AC026523.2-201ENST00000625039 7739 ntBASIC3.29□□□□□ -1.88
KRTAP3-3Q9BYR6 ZNF254-207ENST00000613065 4244 ntTSL 3 BASIC3.29□□□□□ -1.88
KRTAP3-3Q9BYR6 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
KRTAP3-3Q9BYR6 ZNF532-224ENST00000591808 5171 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
KRTAP3-3Q9BYR6 AKAP13-203ENST00000394518 13215 ntAPPRIS ALT2 TSL 1 (best) BASIC3.29□□□□□ -1.88
KRTAP3-3Q9BYR6 ZFYVE9-202ENST00000357206 4567 ntAPPRIS ALT1 TSL 1 (best) BASIC3.29□□□□□ -1.88
KRTAP3-3Q9BYR6 AGO1-201ENST00000373204 13708 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
KRTAP3-3Q9BYR6 MIR520C-201ENST00000385005 87 ntBASIC3.29□□□□□ -1.88
KRTAP3-3Q9BYR6 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC3.29□□□□□ -1.88
KRTAP3-3Q9BYR6 COX6CP13-201ENST00000428703 226 ntBASIC3.29□□□□□ -1.88
KRTAP3-3Q9BYR6 LMCD1-AS1-202ENST00000439407 576 ntTSL 4 BASIC3.29□□□□□ -1.88
KRTAP3-3Q9BYR6 RN7SL815P-201ENST00000470970 290 ntBASIC3.29□□□□□ -1.88
KRTAP3-3Q9BYR6 RPL23AP42-201ENST00000471152 471 ntBASIC3.29□□□□□ -1.88
KRTAP3-3Q9BYR6 RNA5SP271-201ENST00000516700 88 ntBASIC3.29□□□□□ -1.88
KRTAP3-3Q9BYR6 AC015688.6-201ENST00000577737 104 ntBASIC3.29□□□□□ -1.88
KRTAP3-3Q9BYR6 RN7SL311P-201ENST00000579858 306 ntBASIC3.29□□□□□ -1.88
KRTAP3-3Q9BYR6 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC3.29□□□□□ -1.88
KRTAP3-3Q9BYR6 AC092032.1-201ENST00000603090 165 ntBASIC3.29□□□□□ -1.88
KRTAP3-3Q9BYR6 AL355297.2-201ENST00000604792 129 ntBASIC3.29□□□□□ -1.88
KRTAP3-3Q9BYR6 AL136131.3-201ENST00000607600 188 ntBASIC3.29□□□□□ -1.88
KRTAP3-3Q9BYR6 AL356585.10-201ENST00000641883 123 ntBASIC3.29□□□□□ -1.88
KRTAP3-3Q9BYR6 BIRC3-207ENST00000615299 4342 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
KRTAP3-3Q9BYR6 LHX9-201ENST00000367387 7836 ntAPPRIS P3 TSL 1 (best) BASIC3.29□□□□□ -1.88
KRTAP3-3Q9BYR6 AC131280.1-202ENST00000624067 4211 ntBASIC3.29□□□□□ -1.88
KRTAP3-3Q9BYR6 EZH1-201ENST00000415827 4608 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
KRTAP3-3Q9BYR6 ZBTB25-204ENST00000608382 10372 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
KRTAP3-3Q9BYR6 RRS1-AS1-201ENST00000499642 4366 ntTSL 2 BASIC3.29□□□□□ -1.88
KRTAP3-3Q9BYR6 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
KRTAP3-3Q9BYR6 PLEKHH2-201ENST00000282406 6981 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
KRTAP3-3Q9BYR6 NR5A2-203ENST00000367362 5086 ntAPPRIS P3 TSL 1 (best) BASIC3.28□□□□□ -1.88
KRTAP3-3Q9BYR6 SLC7A6-216ENST00000618043 6124 ntTSL 5 BASIC3.28□□□□□ -1.88
KRTAP3-3Q9BYR6 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
KRTAP3-3Q9BYR6 DCX-203ENST00000371993 9231 ntAPPRIS ALT1 TSL 5 BASIC3.28□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 112.2 ms