Protein–RNA interactions for Protein: Q9BYR3

KRTAP4-4, Keratin-associated protein 4-4, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-4Q9BYR3 ZNF268-205ENST00000536435 13475 ntAPPRIS P1 TSL 1 (best) BASIC1.26□□□□□ -2.21
KRTAP4-4Q9BYR3 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC1.26□□□□□ -2.21
KRTAP4-4Q9BYR3 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC1.26□□□□□ -2.21
KRTAP4-4Q9BYR3 TNRC6A-202ENST00000395799 8438 ntAPPRIS P3 TSL 5 BASIC1.26□□□□□ -2.21
KRTAP4-4Q9BYR3 KLF7-201ENST00000309446 8362 ntAPPRIS P1 TSL 1 (best) BASIC1.26□□□□□ -2.21
KRTAP4-4Q9BYR3 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC1.26□□□□□ -2.21
KRTAP4-4Q9BYR3 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC1.26□□□□□ -2.21
KRTAP4-4Q9BYR3 KCNJ10-207ENST00000638868 3883 ntAPPRIS P1 TSL 5 BASIC1.26□□□□□ -2.21
KRTAP4-4Q9BYR3 NCALD-203ENST00000395923 3808 ntAPPRIS P1 TSL 5 BASIC1.26□□□□□ -2.21
KRTAP4-4Q9BYR3 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC1.26□□□□□ -2.21
KRTAP4-4Q9BYR3 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC1.26□□□□□ -2.21
KRTAP4-4Q9BYR3 MGAM2-201ENST00000477922 7867 ntAPPRIS P1 TSL 5 BASIC1.26□□□□□ -2.21
KRTAP4-4Q9BYR3 RPL37A-210ENST00000491306 3647 ntAPPRIS P1 TSL 1 (best) BASIC1.26□□□□□ -2.21
KRTAP4-4Q9BYR3 ARHGEF12-213ENST00000532993 8753 ntTSL 1 (best) BASIC1.26□□□□□ -2.21
KRTAP4-4Q9BYR3 PCDH18-203ENST00000507846 4625 ntTSL 1 (best) BASIC1.26□□□□□ -2.21
KRTAP4-4Q9BYR3 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC1.26□□□□□ -2.21
KRTAP4-4Q9BYR3 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC1.26□□□□□ -2.21
KRTAP4-4Q9BYR3 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC1.26□□□□□ -2.21
KRTAP4-4Q9BYR3 POLH-201ENST00000372226 3322 ntTSL 1 (best) BASIC1.26□□□□□ -2.21
KRTAP4-4Q9BYR3 LIN7C-202ENST00000524596 4290 ntTSL 1 (best) BASIC1.26□□□□□ -2.21
KRTAP4-4Q9BYR3 APP-206ENST00000359726 3294 ntTSL 2 BASIC1.26□□□□□ -2.21
KRTAP4-4Q9BYR3 SLC30A6-201ENST00000282587 5089 ntAPPRIS P1 TSL 1 (best) BASIC1.26□□□□□ -2.21
KRTAP4-4Q9BYR3 APOL4-203ENST00000352371 3227 ntAPPRIS P4 TSL 1 (best) BASIC1.26□□□□□ -2.21
KRTAP4-4Q9BYR3 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC1.26□□□□□ -2.21
KRTAP4-4Q9BYR3 PIK3AP1-203ENST00000371110 3151 ntTSL 2 BASIC1.26□□□□□ -2.21
KRTAP4-4Q9BYR3 SGK3-201ENST00000345714 4055 ntAPPRIS P1 TSL 1 (best) BASIC1.26□□□□□ -2.21
KRTAP4-4Q9BYR3 CYLD-203ENST00000427738 8503 ntTSL 5 BASIC1.26□□□□□ -2.21
KRTAP4-4Q9BYR3 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC1.26□□□□□ -2.21
KRTAP4-4Q9BYR3 POT1-202ENST00000393329 3950 ntTSL 5 BASIC1.26□□□□□ -2.21
KRTAP4-4Q9BYR3 DHX9P1-201ENST00000436565 3076 ntBASIC1.26□□□□□ -2.21
KRTAP4-4Q9BYR3 ABCB11-201ENST00000263817 4775 ntAPPRIS P1 TSL 1 (best) BASIC1.26□□□□□ -2.21
KRTAP4-4Q9BYR3 SYTL5-202ENST00000456733 4704 ntAPPRIS P1 TSL 1 (best) BASIC1.26□□□□□ -2.21
KRTAP4-4Q9BYR3 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC1.26□□□□□ -2.21
KRTAP4-4Q9BYR3 RN7SKP55-201ENST00000364888 307 ntBASIC1.26□□□□□ -2.21
KRTAP4-4Q9BYR3 RNY1P13-201ENST00000365030 105 ntBASIC1.26□□□□□ -2.21
KRTAP4-4Q9BYR3 RNA5SP152-201ENST00000365184 110 ntBASIC1.26□□□□□ -2.21
KRTAP4-4Q9BYR3 RNU6-620P-201ENST00000384017 96 ntBASIC1.26□□□□□ -2.21
KRTAP4-4Q9BYR3 RNU6-1293P-201ENST00000384077 107 ntBASIC1.26□□□□□ -2.21
KRTAP4-4Q9BYR3 MIR99A-201ENST00000384906 81 ntBASIC1.26□□□□□ -2.21
KRTAP4-4Q9BYR3 MRPL53P1-201ENST00000414323 319 ntBASIC1.26□□□□□ -2.21
KRTAP4-4Q9BYR3 AF064858.3-201ENST00000419664 509 ntTSL 5 BASIC1.26□□□□□ -2.21
KRTAP4-4Q9BYR3 FAM96B-201ENST00000422424 676 ntAPPRIS P1 TSL 1 (best) BASIC1.26□□□□□ -2.21
KRTAP4-4Q9BYR3 AL135785.1-201ENST00000422554 399 ntTSL 3 BASIC1.26□□□□□ -2.21
KRTAP4-4Q9BYR3 PTMAP1-205ENST00000455552 325 ntBASIC1.26□□□□□ -2.21
KRTAP4-4Q9BYR3 GAPDHP53-201ENST00000458397 924 ntBASIC1.26□□□□□ -2.21
KRTAP4-4Q9BYR3 RNU7-106P-201ENST00000459514 67 ntBASIC1.26□□□□□ -2.21
KRTAP4-4Q9BYR3 MYL6P4-201ENST00000477911 453 ntBASIC1.26□□□□□ -2.21
KRTAP4-4Q9BYR3 RN7SL817P-201ENST00000480777 288 ntBASIC1.26□□□□□ -2.21
KRTAP4-4Q9BYR3 RN7SL267P-201ENST00000485107 261 ntBASIC1.26□□□□□ -2.21
KRTAP4-4Q9BYR3 RN7SL350P-201ENST00000492591 299 ntBASIC1.26□□□□□ -2.21
KRTAP4-4Q9BYR3 RNA5SP227-201ENST00000516184 113 ntBASIC1.26□□□□□ -2.21
KRTAP4-4Q9BYR3 RNU6-703P-201ENST00000516946 107 ntBASIC1.26□□□□□ -2.21
KRTAP4-4Q9BYR3 IGLVIV-53-201ENST00000520107 367 ntBASIC1.26□□□□□ -2.21
KRTAP4-4Q9BYR3 IGKV2-18-201ENST00000522607 343 ntBASIC1.26□□□□□ -2.21
KRTAP4-4Q9BYR3 AC012464.1-201ENST00000550687 540 ntTSL 4 BASIC1.26□□□□□ -2.21
KRTAP4-4Q9BYR3 AC036176.3-201ENST00000602456 418 ntBASIC1.26□□□□□ -2.21
KRTAP4-4Q9BYR3 IGKV2OR2-7D-201ENST00000603664 304 ntBASIC1.26□□□□□ -2.21
KRTAP4-4Q9BYR3 IGKV2OR2-7-201ENST00000604652 304 ntBASIC1.26□□□□□ -2.21
KRTAP4-4Q9BYR3 RN7SL261P-201ENST00000613441 282 ntBASIC1.26□□□□□ -2.21
KRTAP4-4Q9BYR3 RN7SL126P-201ENST00000616400 299 ntBASIC1.26□□□□□ -2.21
KRTAP4-4Q9BYR3 RNU6-156P-201ENST00000621869 107 ntBASIC1.26□□□□□ -2.21
KRTAP4-4Q9BYR3 ARFGAP2-230ENST00000629231 213 ntTSL 5 BASIC1.26□□□□□ -2.21
KRTAP4-4Q9BYR3 AC006453.3-201ENST00000635891 377 ntBASIC1.26□□□□□ -2.21
KRTAP4-4Q9BYR3 U6.100-201ENST00000636230 99 ntBASIC1.26□□□□□ -2.21
KRTAP4-4Q9BYR3 AC243725.1-201ENST00000637164 436 ntBASIC1.26□□□□□ -2.21
KRTAP4-4Q9BYR3 AC011471.4-201ENST00000638271 216 ntBASIC1.26□□□□□ -2.21
KRTAP4-4Q9BYR3 VPS35-212ENST00000640313 141 ntTSL 5 BASIC1.26□□□□□ -2.21
KRTAP4-4Q9BYR3 5S_rRNA.29-201ENST00000641250 107 ntBASIC1.26□□□□□ -2.21
KRTAP4-4Q9BYR3 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC1.26□□□□□ -2.21
KRTAP4-4Q9BYR3 POLR1D-218ENST00000636817 4592 ntTSL 5 BASIC1.26□□□□□ -2.21
KRTAP4-4Q9BYR3 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC1.26□□□□□ -2.21
KRTAP4-4Q9BYR3 TCL6-206ENST00000467865 3663 ntTSL 2 BASIC1.26□□□□□ -2.21
KRTAP4-4Q9BYR3 SCN1A-217ENST00000637988 8562 ntAPPRIS P3 TSL 5 BASIC1.26□□□□□ -2.21
KRTAP4-4Q9BYR3 OR7C1-203ENST00000641666 11711 ntAPPRIS P1 BASIC1.26□□□□□ -2.21
KRTAP4-4Q9BYR3 MDM4-205ENST00000391947 10008 ntTSL 1 (best) BASIC1.26□□□□□ -2.21
KRTAP4-4Q9BYR3 SLC35A5-206ENST00000492406 4399 ntAPPRIS P1 TSL 1 (best) BASIC1.26□□□□□ -2.21
KRTAP4-4Q9BYR3 SORBS1-209ENST00000371245 2779 ntAPPRIS ALT2 TSL 1 (best) BASIC1.26□□□□□ -2.21
KRTAP4-4Q9BYR3 CPEB4-202ENST00000334035 6705 ntTSL 1 (best) BASIC1.26□□□□□ -2.21
KRTAP4-4Q9BYR3 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC1.26□□□□□ -2.21
KRTAP4-4Q9BYR3 NR5A2-203ENST00000367362 5086 ntAPPRIS P3 TSL 1 (best) BASIC1.26□□□□□ -2.21
KRTAP4-4Q9BYR3 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC1.26□□□□□ -2.21
KRTAP4-4Q9BYR3 CENPJ-206ENST00000616936 5020 ntTSL 1 (best) BASIC1.26□□□□□ -2.21
KRTAP4-4Q9BYR3 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC1.26□□□□□ -2.21
KRTAP4-4Q9BYR3 FAM35A-201ENST00000298784 3402 ntAPPRIS P1 TSL 2 BASIC1.26□□□□□ -2.21
KRTAP4-4Q9BYR3 AC007496.3-201ENST00000624987 3443 ntBASIC1.26□□□□□ -2.21
KRTAP4-4Q9BYR3 CDKL5-205ENST00000623535 12533 ntAPPRIS P1 TSL 1 (best) BASIC1.26□□□□□ -2.21
KRTAP4-4Q9BYR3 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC1.26□□□□□ -2.21
KRTAP4-4Q9BYR3 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC1.26□□□□□ -2.21
KRTAP4-4Q9BYR3 AL158064.2-205ENST00000640346 4082 ntTSL 5 BASIC1.26□□□□□ -2.21
KRTAP4-4Q9BYR3 OR2M3-202ENST00000641626 9913 ntAPPRIS P1 BASIC1.26□□□□□ -2.21
KRTAP4-4Q9BYR3 PHKB-201ENST00000299167 5464 ntTSL 5 BASIC1.26□□□□□ -2.21
KRTAP4-4Q9BYR3 LRRC37A12P-201ENST00000454917 1801 ntBASIC1.26□□□□□ -2.21
KRTAP4-4Q9BYR3 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC1.26□□□□□ -2.21
KRTAP4-4Q9BYR3 NUP210L-201ENST00000271854 5424 ntAPPRIS ALT2 TSL 5 BASIC1.26□□□□□ -2.21
KRTAP4-4Q9BYR3 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC1.26□□□□□ -2.21
KRTAP4-4Q9BYR3 ZNF525-201ENST00000467003 6107 ntTSL 4 BASIC1.26□□□□□ -2.21
KRTAP4-4Q9BYR3 ZNF788-203ENST00000430298 3941 ntTSL 2 BASIC1.26□□□□□ -2.21
KRTAP4-4Q9BYR3 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC1.26□□□□□ -2.21
KRTAP4-4Q9BYR3 AC007993.1-201ENST00000621298 2430 ntBASIC1.26□□□□□ -2.21
KRTAP4-4Q9BYR3 ZNF585A-201ENST00000292841 8618 ntAPPRIS P1 TSL 1 (best) BASIC1.26□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 127.5 ms