Protein–RNA interactions for Protein: P13612

ITGA4, Integrin alpha-4, humanhuman

Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4P13612 SNORA70.24-201ENST00000517233 118 ntBASIC3.81□□□□□ -1.8
ITGA4P13612 AP006245.1-201ENST00000522549 120 ntBASIC3.81□□□□□ -1.8
ITGA4P13612 AC016256.1-201ENST00000547971 354 ntBASIC3.81□□□□□ -1.8
ITGA4P13612 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC3.81□□□□□ -1.8
ITGA4P13612 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC3.81□□□□□ -1.8
ITGA4P13612 AL109918.3-201ENST00000603072 338 ntBASIC3.81□□□□□ -1.8
ITGA4P13612 AC010900.2-201ENST00000604508 210 ntBASIC3.81□□□□□ -1.8
ITGA4P13612 RMST_8.1-201ENST00000610287 165 ntBASIC3.81□□□□□ -1.8
ITGA4P13612 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
ITGA4P13612 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC3.81□□□□□ -1.8
ITGA4P13612 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.8□□□□□ -1.8
ITGA4P13612 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC3.8□□□□□ -1.8
ITGA4P13612 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC3.8□□□□□ -1.8
ITGA4P13612 IL33-203ENST00000456383 2501 ntTSL 5 BASIC3.8□□□□□ -1.8
ITGA4P13612 MIR335-201ENST00000362173 94 ntBASIC3.8□□□□□ -1.8
ITGA4P13612 RNU6-1141P-201ENST00000364520 107 ntBASIC3.8□□□□□ -1.8
ITGA4P13612 SNORA36A-201ENST00000384221 132 ntBASIC3.8□□□□□ -1.8
ITGA4P13612 RNU6-541P-201ENST00000384709 110 ntBASIC3.8□□□□□ -1.8
ITGA4P13612 MIR487A-201ENST00000385009 80 ntBASIC3.8□□□□□ -1.8
ITGA4P13612 U3.39-201ENST00000408569 239 ntBASIC3.8□□□□□ -1.8
ITGA4P13612 RPL23AP82-202ENST00000427528 469 ntBASIC3.8□□□□□ -1.8
ITGA4P13612 snoU13.28-201ENST00000459235 104 ntBASIC3.8□□□□□ -1.8
ITGA4P13612 RN7SL601P-201ENST00000471221 293 ntBASIC3.8□□□□□ -1.8
ITGA4P13612 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC3.8□□□□□ -1.8
ITGA4P13612 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC3.8□□□□□ -1.8
ITGA4P13612 AC027288.2-201ENST00000553028 243 ntBASIC3.8□□□□□ -1.8
ITGA4P13612 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC3.8□□□□□ -1.8
ITGA4P13612 MIR5571-201ENST00000577998 113 ntBASIC3.8□□□□□ -1.8
ITGA4P13612 MIR3529-201ENST00000637713 78 ntBASIC3.8□□□□□ -1.8
ITGA4P13612 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC3.8□□□□□ -1.8
ITGA4P13612 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
ITGA4P13612 OFD1P6Y-202ENST00000451061 2724 ntBASIC3.79□□□□□ -1.8
ITGA4P13612 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
ITGA4P13612 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
ITGA4P13612 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC3.79□□□□□ -1.8
ITGA4P13612 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
ITGA4P13612 Y_RNA.16-201ENST00000362421 102 ntBASIC3.79□□□□□ -1.8
ITGA4P13612 Y_RNA.20-201ENST00000362479 113 ntBASIC3.79□□□□□ -1.8
ITGA4P13612 RNA5SP361-201ENST00000362686 118 ntBASIC3.79□□□□□ -1.8
ITGA4P13612 Y_RNA.319-201ENST00000365138 92 ntBASIC3.79□□□□□ -1.8
ITGA4P13612 SNORA9-201ENST00000384215 133 ntBASIC3.79□□□□□ -1.8
ITGA4P13612 U8.10-201ENST00000384260 133 ntBASIC3.79□□□□□ -1.8
ITGA4P13612 MIR491-201ENST00000384877 84 ntBASIC3.79□□□□□ -1.8
ITGA4P13612 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
ITGA4P13612 RNA5SP213-201ENST00000391031 106 ntBASIC3.79□□□□□ -1.8
ITGA4P13612 Y_RNA.602-201ENST00000410535 92 ntBASIC3.79□□□□□ -1.8
ITGA4P13612 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC3.79□□□□□ -1.8
ITGA4P13612 AC006989.1-201ENST00000427212 131 ntBASIC3.79□□□□□ -1.8
ITGA4P13612 AC004383.1-201ENST00000438135 289 ntBASIC3.79□□□□□ -1.8
ITGA4P13612 AC016632.1-201ENST00000503994 196 ntBASIC3.79□□□□□ -1.8
ITGA4P13612 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC3.79□□□□□ -1.8
ITGA4P13612 RNU6-1338P-201ENST00000516328 91 ntBASIC3.79□□□□□ -1.8
ITGA4P13612 ACA59.2-201ENST00000517061 156 ntBASIC3.79□□□□□ -1.8
ITGA4P13612 CKS1BP7-201ENST00000522230 235 ntBASIC3.79□□□□□ -1.8
ITGA4P13612 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC3.79□□□□□ -1.8
ITGA4P13612 MIR4425-201ENST00000580572 84 ntBASIC3.79□□□□□ -1.8
ITGA4P13612 MIR5195-201ENST00000583555 115 ntBASIC3.79□□□□□ -1.8
ITGA4P13612 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC3.79□□□□□ -1.8
ITGA4P13612 AC073657.2-201ENST00000605661 303 ntBASIC3.79□□□□□ -1.8
ITGA4P13612 MIR8058-201ENST00000615737 89 ntBASIC3.79□□□□□ -1.8
ITGA4P13612 OTUD4P1-201ENST00000237841 3067 ntBASIC3.79□□□□□ -1.8
ITGA4P13612 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
ITGA4P13612 AC008725.1-201ENST00000605123 2263 ntBASIC3.78□□□□□ -1.8
ITGA4P13612 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC3.78□□□□□ -1.8
ITGA4P13612 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
ITGA4P13612 SNORD81.1-201ENST00000363064 77 ntBASIC3.78□□□□□ -1.8
ITGA4P13612 AP002088.1-201ENST00000382740 395 ntBASIC3.78□□□□□ -1.8
ITGA4P13612 Y_RNA.539-201ENST00000384635 107 ntBASIC3.78□□□□□ -1.8
ITGA4P13612 Y_RNA.541-201ENST00000384640 113 ntBASIC3.78□□□□□ -1.8
ITGA4P13612 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
ITGA4P13612 Y_RNA.581-201ENST00000391017 97 ntBASIC3.78□□□□□ -1.8
ITGA4P13612 RN7SKP61-201ENST00000410642 295 ntBASIC3.78□□□□□ -1.8
ITGA4P13612 RNU2-64P-201ENST00000411315 191 ntBASIC3.78□□□□□ -1.8
ITGA4P13612 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC3.78□□□□□ -1.8
ITGA4P13612 AC096638.1-201ENST00000444678 216 ntBASIC3.78□□□□□ -1.8
ITGA4P13612 RPL30P14-201ENST00000482744 348 ntBASIC3.78□□□□□ -1.8
ITGA4P13612 RNU5F-8P-201ENST00000515941 111 ntBASIC3.78□□□□□ -1.8
ITGA4P13612 RNU2-27P-201ENST00000516185 142 ntBASIC3.78□□□□□ -1.8
ITGA4P13612 SNORA31.6-201ENST00000516241 130 ntBASIC3.78□□□□□ -1.8
ITGA4P13612 RNA5SP309-201ENST00000516670 106 ntBASIC3.78□□□□□ -1.8
ITGA4P13612 UBL5P4-201ENST00000562584 236 ntBASIC3.78□□□□□ -1.8
ITGA4P13612 AC002076.2-201ENST00000617362 122 ntBASIC3.78□□□□□ -1.8
ITGA4P13612 MIR6076-201ENST00000617521 113 ntBASIC3.78□□□□□ -1.8
ITGA4P13612 MIR3199-2-201ENST00000636243 86 ntBASIC3.78□□□□□ -1.8
ITGA4P13612 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.78□□□□□ -1.8
ITGA4P13612 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
ITGA4P13612 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
ITGA4P13612 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.78□□□□□ -1.8
ITGA4P13612 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
ITGA4P13612 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
ITGA4P13612 RBBP8P1-201ENST00000449447 1844 ntBASIC3.77□□□□□ -1.81
ITGA4P13612 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC3.77□□□□□ -1.81
ITGA4P13612 AC068647.1-201ENST00000489539 2265 ntBASIC3.77□□□□□ -1.81
ITGA4P13612 MIR30E-201ENST00000362104 92 ntBASIC3.77□□□□□ -1.81
ITGA4P13612 SNORD113-8-201ENST00000363497 74 ntBASIC3.77□□□□□ -1.81
ITGA4P13612 RNU6-102P-201ENST00000384485 104 ntBASIC3.77□□□□□ -1.81
ITGA4P13612 MIR10B-201ENST00000385011 110 ntBASIC3.77□□□□□ -1.81
ITGA4P13612 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC3.77□□□□□ -1.81
ITGA4P13612 UBE2Q2P12-201ENST00000414573 204 ntBASIC3.77□□□□□ -1.81
ITGA4P13612 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC3.77□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 114.7 ms