Protein–RNA interactions for Protein: O43364

HOXA2, Homeobox protein Hox-A2, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA2O43364 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
HOXA2O43364 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
HOXA2O43364 U3.9-201ENST00000363823 204 ntBASIC4.79□□□□□ -1.64
HOXA2O43364 RNU1-132P-201ENST00000364300 164 ntBASIC4.79□□□□□ -1.64
HOXA2O43364 RNU6-915P-201ENST00000364943 103 ntBASIC4.79□□□□□ -1.64
HOXA2O43364 RNU6-588P-201ENST00000410281 105 ntBASIC4.79□□□□□ -1.64
HOXA2O43364 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC4.79□□□□□ -1.64
HOXA2O43364 RPL7AP28-201ENST00000464513 571 ntBASIC4.79□□□□□ -1.64
HOXA2O43364 RN7SL132P-201ENST00000478131 296 ntBASIC4.79□□□□□ -1.64
HOXA2O43364 Y_RNA.712-201ENST00000517011 92 ntBASIC4.79□□□□□ -1.64
HOXA2O43364 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC4.79□□□□□ -1.64
HOXA2O43364 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC4.79□□□□□ -1.64
HOXA2O43364 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC4.79□□□□□ -1.64
HOXA2O43364 RN7SL176P-201ENST00000580352 264 ntBASIC4.79□□□□□ -1.64
HOXA2O43364 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC4.79□□□□□ -1.64
HOXA2O43364 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC4.79□□□□□ -1.64
HOXA2O43364 U6.115-201ENST00000636045 103 ntBASIC4.79□□□□□ -1.64
HOXA2O43364 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC4.79□□□□□ -1.64
HOXA2O43364 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC4.79□□□□□ -1.64
HOXA2O43364 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
HOXA2O43364 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC4.79□□□□□ -1.64
HOXA2O43364 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
HOXA2O43364 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC4.79□□□□□ -1.64
HOXA2O43364 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
HOXA2O43364 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
HOXA2O43364 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
HOXA2O43364 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
HOXA2O43364 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC4.78□□□□□ -1.64
HOXA2O43364 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
HOXA2O43364 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC4.78□□□□□ -1.64
HOXA2O43364 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
HOXA2O43364 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC4.78□□□□□ -1.64
HOXA2O43364 AC087190.4-201ENST00000574616 8334 ntBASIC4.78□□□□□ -1.64
HOXA2O43364 RNU1-75P-201ENST00000347264 129 ntBASIC4.78□□□□□ -1.64
HOXA2O43364 MIR331-201ENST00000362302 94 ntBASIC4.78□□□□□ -1.64
HOXA2O43364 RNA5SP502-201ENST00000362694 119 ntBASIC4.78□□□□□ -1.64
HOXA2O43364 RNA5-8SP4-201ENST00000365096 150 ntBASIC4.78□□□□□ -1.64
HOXA2O43364 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
HOXA2O43364 RNA5SP504-201ENST00000410676 117 ntBASIC4.78□□□□□ -1.64
HOXA2O43364 RN7SKP27-201ENST00000410684 333 ntBASIC4.78□□□□□ -1.64
HOXA2O43364 CRYBB2P1-203ENST00000415709 538 ntBASIC4.78□□□□□ -1.64
HOXA2O43364 AL139281.1-201ENST00000422120 335 ntBASIC4.78□□□□□ -1.64
HOXA2O43364 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC4.78□□□□□ -1.64
HOXA2O43364 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC4.78□□□□□ -1.64
HOXA2O43364 RNU6-561P-201ENST00000516222 102 ntBASIC4.78□□□□□ -1.64
HOXA2O43364 AC074050.1-201ENST00000563247 211 ntBASIC4.78□□□□□ -1.64
HOXA2O43364 AC015912.2-201ENST00000571053 181 ntBASIC4.78□□□□□ -1.64
HOXA2O43364 AC091178.1-203ENST00000584586 279 ntBASIC4.78□□□□□ -1.64
HOXA2O43364 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC4.78□□□□□ -1.64
HOXA2O43364 uc_338.32-201ENST00000615087 172 ntBASIC4.78□□□□□ -1.64
HOXA2O43364 MIR8059-201ENST00000620427 81 ntBASIC4.78□□□□□ -1.64
HOXA2O43364 AL773545.4-201ENST00000637262 310 ntBASIC4.78□□□□□ -1.64
HOXA2O43364 AL513478.4-201ENST00000641636 310 ntBASIC4.78□□□□□ -1.64
HOXA2O43364 AC007496.3-201ENST00000624987 3443 ntBASIC4.78□□□□□ -1.64
HOXA2O43364 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
HOXA2O43364 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
HOXA2O43364 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC4.77□□□□□ -1.65
HOXA2O43364 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
HOXA2O43364 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC4.77□□□□□ -1.65
HOXA2O43364 U3.8-201ENST00000363675 217 ntBASIC4.77□□□□□ -1.65
HOXA2O43364 Y_RNA.361-201ENST00000365515 120 ntBASIC4.77□□□□□ -1.65
HOXA2O43364 RNU6-748P-201ENST00000384648 107 ntBASIC4.77□□□□□ -1.65
HOXA2O43364 U8.12-201ENST00000384701 133 ntBASIC4.77□□□□□ -1.65
HOXA2O43364 SNORA48.5-201ENST00000391143 135 ntBASIC4.77□□□□□ -1.65
HOXA2O43364 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC4.77□□□□□ -1.65
HOXA2O43364 AL441985.1-201ENST00000457727 251 ntBASIC4.77□□□□□ -1.65
HOXA2O43364 APOA2-205ENST00000468465 421 ntTSL 2 BASIC4.77□□□□□ -1.65
HOXA2O43364 SRIP1-201ENST00000489235 288 ntBASIC4.77□□□□□ -1.65
HOXA2O43364 AC026402.1-201ENST00000513642 170 ntBASIC4.77□□□□□ -1.65
HOXA2O43364 AC134698.5-201ENST00000519444 336 ntBASIC4.77□□□□□ -1.65
HOXA2O43364 MIR4679-2-201ENST00000578358 77 ntBASIC4.77□□□□□ -1.65
HOXA2O43364 MIR4660-201ENST00000583549 74 ntBASIC4.77□□□□□ -1.65
HOXA2O43364 RPS15AP11-201ENST00000594193 385 ntBASIC4.77□□□□□ -1.65
HOXA2O43364 AC025754.2-201ENST00000606491 432 ntBASIC4.77□□□□□ -1.65
HOXA2O43364 MIR6891-201ENST00000618788 93 ntBASIC4.77□□□□□ -1.65
HOXA2O43364 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC4.77□□□□□ -1.65
HOXA2O43364 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
HOXA2O43364 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC4.77□□□□□ -1.65
HOXA2O43364 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
HOXA2O43364 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
HOXA2O43364 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
HOXA2O43364 RNU6-755P-201ENST00000364400 103 ntBASIC4.76□□□□□ -1.65
HOXA2O43364 SNORA18.2-201ENST00000383865 132 ntBASIC4.76□□□□□ -1.65
HOXA2O43364 RNY3P5-201ENST00000384127 102 ntBASIC4.76□□□□□ -1.65
HOXA2O43364 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
HOXA2O43364 RNU4-43P-201ENST00000410628 137 ntBASIC4.76□□□□□ -1.65
HOXA2O43364 AC090142.3-201ENST00000519012 385 ntBASIC4.76□□□□□ -1.65
HOXA2O43364 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC4.76□□□□□ -1.65
HOXA2O43364 MTND5P34-201ENST00000568888 325 ntBASIC4.76□□□□□ -1.65
HOXA2O43364 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC4.76□□□□□ -1.65
HOXA2O43364 Y_RNA.757-201ENST00000578934 114 ntBASIC4.76□□□□□ -1.65
HOXA2O43364 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
HOXA2O43364 AC023043.3-201ENST00000593113 385 ntBASIC4.76□□□□□ -1.65
HOXA2O43364 RNU6-91P-201ENST00000607774 107 ntBASIC4.76□□□□□ -1.65
HOXA2O43364 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC4.76□□□□□ -1.65
HOXA2O43364 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC4.76□□□□□ -1.65
HOXA2O43364 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
HOXA2O43364 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
HOXA2O43364 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
HOXA2O43364 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 107.2 ms