Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 SNORA72.4-201ENST00000384174 132 ntBASIC4.48□□□□□ -1.69
CUEDC1Q9NWM3 MIR129-1-201ENST00000384972 72 ntBASIC4.48□□□□□ -1.69
CUEDC1Q9NWM3 RN7SKP267-201ENST00000410381 285 ntBASIC4.48□□□□□ -1.69
CUEDC1Q9NWM3 RNU6-710P-201ENST00000410424 105 ntBASIC4.48□□□□□ -1.69
CUEDC1Q9NWM3 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC4.48□□□□□ -1.69
CUEDC1Q9NWM3 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC4.48□□□□□ -1.69
CUEDC1Q9NWM3 DCLRE1CP1-201ENST00000454630 470 ntBASIC4.48□□□□□ -1.69
CUEDC1Q9NWM3 U3.44-201ENST00000458938 192 ntBASIC4.48□□□□□ -1.69
CUEDC1Q9NWM3 Y_RNA.651-201ENST00000459380 103 ntBASIC4.48□□□□□ -1.69
CUEDC1Q9NWM3 RNU6-772P-201ENST00000516042 105 ntBASIC4.48□□□□□ -1.69
CUEDC1Q9NWM3 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
CUEDC1Q9NWM3 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
CUEDC1Q9NWM3 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC4.48□□□□□ -1.69
CUEDC1Q9NWM3 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC4.48□□□□□ -1.69
CUEDC1Q9NWM3 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
CUEDC1Q9NWM3 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
CUEDC1Q9NWM3 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC4.48□□□□□ -1.69
CUEDC1Q9NWM3 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.48□□□□□ -1.69
CUEDC1Q9NWM3 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
CUEDC1Q9NWM3 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
CUEDC1Q9NWM3 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
CUEDC1Q9NWM3 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
CUEDC1Q9NWM3 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
CUEDC1Q9NWM3 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
CUEDC1Q9NWM3 RNU6-884P-201ENST00000363889 107 ntBASIC4.47□□□□□ -1.69
CUEDC1Q9NWM3 RNU6-324P-201ENST00000363957 106 ntBASIC4.47□□□□□ -1.69
CUEDC1Q9NWM3 RNU4-10P-201ENST00000364383 140 ntBASIC4.47□□□□□ -1.69
CUEDC1Q9NWM3 RNU6-32P-201ENST00000383948 107 ntBASIC4.47□□□□□ -1.69
CUEDC1Q9NWM3 RNU6-13P-201ENST00000384248 107 ntBASIC4.47□□□□□ -1.69
CUEDC1Q9NWM3 Y_RNA.521-201ENST00000384560 114 ntBASIC4.47□□□□□ -1.69
CUEDC1Q9NWM3 RNU6-12P-201ENST00000384604 107 ntBASIC4.47□□□□□ -1.69
CUEDC1Q9NWM3 RNU6-41P-201ENST00000384741 107 ntBASIC4.47□□□□□ -1.69
CUEDC1Q9NWM3 MIR518D-201ENST00000385014 87 ntBASIC4.47□□□□□ -1.69
CUEDC1Q9NWM3 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
CUEDC1Q9NWM3 SNORA40.5-201ENST00000391061 128 ntBASIC4.47□□□□□ -1.69
CUEDC1Q9NWM3 RNA5SP146-201ENST00000410743 123 ntBASIC4.47□□□□□ -1.69
CUEDC1Q9NWM3 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC4.47□□□□□ -1.69
CUEDC1Q9NWM3 HMGN2P20-201ENST00000437531 273 ntBASIC4.47□□□□□ -1.69
CUEDC1Q9NWM3 MTCO1P44-201ENST00000441935 243 ntBASIC4.47□□□□□ -1.69
CUEDC1Q9NWM3 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC4.47□□□□□ -1.69
CUEDC1Q9NWM3 snoU13.28-201ENST00000459235 104 ntBASIC4.47□□□□□ -1.69
CUEDC1Q9NWM3 AC091179.3-201ENST00000474761 144 ntBASIC4.47□□□□□ -1.69
CUEDC1Q9NWM3 RN7SL41P-201ENST00000476144 297 ntBASIC4.47□□□□□ -1.69
CUEDC1Q9NWM3 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC4.47□□□□□ -1.69
CUEDC1Q9NWM3 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC4.47□□□□□ -1.69
CUEDC1Q9NWM3 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC4.47□□□□□ -1.69
CUEDC1Q9NWM3 AC015912.2-201ENST00000571053 181 ntBASIC4.47□□□□□ -1.69
CUEDC1Q9NWM3 AL670379.3-201ENST00000605040 251 ntBASIC4.47□□□□□ -1.69
CUEDC1Q9NWM3 MIR92B-201ENST00000607575 96 ntBASIC4.47□□□□□ -1.69
CUEDC1Q9NWM3 AL445567.2-201ENST00000618935 498 ntBASIC4.47□□□□□ -1.69
CUEDC1Q9NWM3 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
CUEDC1Q9NWM3 U3.53-201ENST00000628922 216 ntBASIC4.47□□□□□ -1.69
CUEDC1Q9NWM3 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
CUEDC1Q9NWM3 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
CUEDC1Q9NWM3 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC4.47□□□□□ -1.69
CUEDC1Q9NWM3 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC4.46□□□□□ -1.69
CUEDC1Q9NWM3 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC4.46□□□□□ -1.69
CUEDC1Q9NWM3 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC4.46□□□□□ -1.69
CUEDC1Q9NWM3 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC4.46□□□□□ -1.7
CUEDC1Q9NWM3 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC4.46□□□□□ -1.7
CUEDC1Q9NWM3 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC4.46□□□□□ -1.7
CUEDC1Q9NWM3 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
CUEDC1Q9NWM3 ZNF702P-202ENST00000434269 1966 ntBASIC4.46□□□□□ -1.7
CUEDC1Q9NWM3 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
CUEDC1Q9NWM3 RNU1-62P-201ENST00000362599 164 ntBASIC4.46□□□□□ -1.7
CUEDC1Q9NWM3 RNU6-1285P-201ENST00000363480 105 ntBASIC4.46□□□□□ -1.7
CUEDC1Q9NWM3 RNU1-140P-201ENST00000365040 165 ntBASIC4.46□□□□□ -1.7
CUEDC1Q9NWM3 RNU1-64P-201ENST00000365443 163 ntBASIC4.46□□□□□ -1.7
CUEDC1Q9NWM3 RNU6-969P-201ENST00000383900 105 ntBASIC4.46□□□□□ -1.7
CUEDC1Q9NWM3 SNORA70F-201ENST00000384142 135 ntBASIC4.46□□□□□ -1.7
CUEDC1Q9NWM3 Y_RNA.495-201ENST00000384435 112 ntBASIC4.46□□□□□ -1.7
CUEDC1Q9NWM3 RNU6-588P-201ENST00000410281 105 ntBASIC4.46□□□□□ -1.7
CUEDC1Q9NWM3 RNA5SP38-201ENST00000410750 119 ntBASIC4.46□□□□□ -1.7
CUEDC1Q9NWM3 AC099548.1-201ENST00000421443 426 ntBASIC4.46□□□□□ -1.7
CUEDC1Q9NWM3 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC4.46□□□□□ -1.7
CUEDC1Q9NWM3 RPL23AP14-201ENST00000468281 468 ntBASIC4.46□□□□□ -1.7
CUEDC1Q9NWM3 RPS29P24-201ENST00000486345 171 ntBASIC4.46□□□□□ -1.7
CUEDC1Q9NWM3 RNU6-1183P-201ENST00000517054 60 ntBASIC4.46□□□□□ -1.7
CUEDC1Q9NWM3 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC4.46□□□□□ -1.7
CUEDC1Q9NWM3 CR383656.8-201ENST00000549046 145 ntBASIC4.46□□□□□ -1.7
CUEDC1Q9NWM3 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC4.46□□□□□ -1.7
CUEDC1Q9NWM3 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC4.46□□□□□ -1.7
CUEDC1Q9NWM3 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.7
CUEDC1Q9NWM3 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC4.46□□□□□ -1.7
CUEDC1Q9NWM3 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC4.46□□□□□ -1.7
CUEDC1Q9NWM3 CENPCP1-201ENST00000533085 2578 ntBASIC4.46□□□□□ -1.7
CUEDC1Q9NWM3 AC068700.1-201ENST00000565862 3754 ntBASIC4.45□□□□□ -1.7
CUEDC1Q9NWM3 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC4.45□□□□□ -1.7
CUEDC1Q9NWM3 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
CUEDC1Q9NWM3 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC4.45□□□□□ -1.7
CUEDC1Q9NWM3 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
CUEDC1Q9NWM3 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC4.45□□□□□ -1.7
CUEDC1Q9NWM3 RNU6-728P-201ENST00000365375 104 ntBASIC4.45□□□□□ -1.7
CUEDC1Q9NWM3 RNU6-1264P-201ENST00000383891 107 ntBASIC4.45□□□□□ -1.7
CUEDC1Q9NWM3 SNORA26.3-201ENST00000391119 136 ntBASIC4.45□□□□□ -1.7
CUEDC1Q9NWM3 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC4.45□□□□□ -1.7
CUEDC1Q9NWM3 AC074117.2-201ENST00000417130 397 ntBASIC4.45□□□□□ -1.7
CUEDC1Q9NWM3 AC012306.1-201ENST00000423267 114 ntBASIC4.45□□□□□ -1.7
CUEDC1Q9NWM3 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC4.45□□□□□ -1.7
CUEDC1Q9NWM3 RPL23AP1-201ENST00000428990 471 ntBASIC4.45□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 118.3 ms