Protein–RNA interactions for Protein: Q96BH1

RNF25, E3 ubiquitin-protein ligase RNF25, humanhuman

Predicted RBP Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF25Q96BH1 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
RNF25Q96BH1 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
RNF25Q96BH1 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
RNF25Q96BH1 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC5.33□□□□□ -1.56
RNF25Q96BH1 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
RNF25Q96BH1 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
RNF25Q96BH1 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
RNF25Q96BH1 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC5.33□□□□□ -1.56
RNF25Q96BH1 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
RNF25Q96BH1 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
RNF25Q96BH1 AP003122.5-201ENST00000527668 3766 ntBASIC5.32□□□□□ -1.56
RNF25Q96BH1 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
RNF25Q96BH1 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC5.32□□□□□ -1.56
RNF25Q96BH1 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
RNF25Q96BH1 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC5.32□□□□□ -1.56
RNF25Q96BH1 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC5.32□□□□□ -1.56
RNF25Q96BH1 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC5.32□□□□□ -1.56
RNF25Q96BH1 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
RNF25Q96BH1 Y_RNA.49-201ENST00000362714 112 ntBASIC5.32□□□□□ -1.56
RNF25Q96BH1 Y_RNA.163-201ENST00000363702 113 ntBASIC5.32□□□□□ -1.56
RNF25Q96BH1 SNORD31B-201ENST00000364977 69 ntBASIC5.32□□□□□ -1.56
RNF25Q96BH1 SNORA2.3-201ENST00000383920 135 ntBASIC5.32□□□□□ -1.56
RNF25Q96BH1 RNU6-1235P-201ENST00000384559 107 ntBASIC5.32□□□□□ -1.56
RNF25Q96BH1 SNORA26.2-201ENST00000390922 122 ntBASIC5.32□□□□□ -1.56
RNF25Q96BH1 COX6CP13-201ENST00000428703 226 ntBASIC5.32□□□□□ -1.56
RNF25Q96BH1 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC5.32□□□□□ -1.56
RNF25Q96BH1 AC245102.2-201ENST00000448956 180 ntBASIC5.32□□□□□ -1.56
RNF25Q96BH1 RNU6-498P-201ENST00000459468 107 ntBASIC5.32□□□□□ -1.56
RNF25Q96BH1 AC025647.1-201ENST00000517879 253 ntBASIC5.32□□□□□ -1.56
RNF25Q96BH1 AC233702.9-201ENST00000581528 203 ntBASIC5.32□□□□□ -1.56
RNF25Q96BH1 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC5.32□□□□□ -1.56
RNF25Q96BH1 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
RNF25Q96BH1 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC5.32□□□□□ -1.56
RNF25Q96BH1 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC5.32□□□□□ -1.56
RNF25Q96BH1 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
RNF25Q96BH1 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
RNF25Q96BH1 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC5.31□□□□□ -1.56
RNF25Q96BH1 RNU6-1240P-201ENST00000365155 104 ntBASIC5.31□□□□□ -1.56
RNF25Q96BH1 RNU6-234P-201ENST00000365229 104 ntBASIC5.31□□□□□ -1.56
RNF25Q96BH1 RNU6-905P-201ENST00000384434 107 ntBASIC5.31□□□□□ -1.56
RNF25Q96BH1 RN7SKP177-201ENST00000410567 355 ntBASIC5.31□□□□□ -1.56
RNF25Q96BH1 EDDM3CP-201ENST00000415977 425 ntBASIC5.31□□□□□ -1.56
RNF25Q96BH1 AC108075.1-201ENST00000424692 529 ntBASIC5.31□□□□□ -1.56
RNF25Q96BH1 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC5.31□□□□□ -1.56
RNF25Q96BH1 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC5.31□□□□□ -1.56
RNF25Q96BH1 RN7SL443P-201ENST00000464331 290 ntBASIC5.31□□□□□ -1.56
RNF25Q96BH1 AC009127.1-201ENST00000467090 155 ntBASIC5.31□□□□□ -1.56
RNF25Q96BH1 AC109329.2-201ENST00000519658 482 ntBASIC5.31□□□□□ -1.56
RNF25Q96BH1 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC5.31□□□□□ -1.56
RNF25Q96BH1 RN7SL703P-201ENST00000578485 302 ntBASIC5.31□□□□□ -1.56
RNF25Q96BH1 RN7SL435P-201ENST00000584418 282 ntBASIC5.31□□□□□ -1.56
RNF25Q96BH1 AC096577.2-201ENST00000611455 153 ntBASIC5.31□□□□□ -1.56
RNF25Q96BH1 RPSAP73-201ENST00000614820 330 ntBASIC5.31□□□□□ -1.56
RNF25Q96BH1 MIR6826-201ENST00000617808 98 ntBASIC5.31□□□□□ -1.56
RNF25Q96BH1 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC5.31□□□□□ -1.56
RNF25Q96BH1 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC5.31□□□□□ -1.56
RNF25Q96BH1 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
RNF25Q96BH1 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
RNF25Q96BH1 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC5.31□□□□□ -1.56
RNF25Q96BH1 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC5.31□□□□□ -1.56
RNF25Q96BH1 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
RNF25Q96BH1 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC5.3□□□□□ -1.56
RNF25Q96BH1 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
RNF25Q96BH1 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
RNF25Q96BH1 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
RNF25Q96BH1 U3.2-201ENST00000362981 210 ntBASIC5.3□□□□□ -1.56
RNF25Q96BH1 Y_RNA.796-201ENST00000364268 102 ntBASIC5.3□□□□□ -1.56
RNF25Q96BH1 Y_RNA.242-201ENST00000364473 110 ntBASIC5.3□□□□□ -1.56
RNF25Q96BH1 Y_RNA.799-201ENST00000364992 102 ntBASIC5.3□□□□□ -1.56
RNF25Q96BH1 RNU1-43P-201ENST00000365052 165 ntBASIC5.3□□□□□ -1.56
RNF25Q96BH1 Y_RNA.348-201ENST00000365403 103 ntBASIC5.3□□□□□ -1.56
RNF25Q96BH1 SNORA51.5-201ENST00000384126 131 ntBASIC5.3□□□□□ -1.56
RNF25Q96BH1 COX6CP6-201ENST00000490840 228 ntBASIC5.3□□□□□ -1.56
RNF25Q96BH1 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC5.3□□□□□ -1.56
RNF25Q96BH1 SNORA40.13-201ENST00000516379 120 ntBASIC5.3□□□□□ -1.56
RNF25Q96BH1 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC5.3□□□□□ -1.56
RNF25Q96BH1 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC5.3□□□□□ -1.56
RNF25Q96BH1 AL049767.1-202ENST00000637826 242 ntBASIC5.3□□□□□ -1.56
RNF25Q96BH1 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
RNF25Q96BH1 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC5.3□□□□□ -1.56
RNF25Q96BH1 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
RNF25Q96BH1 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
RNF25Q96BH1 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC5.3□□□□□ -1.56
RNF25Q96BH1 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
RNF25Q96BH1 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC5.29□□□□□ -1.56
RNF25Q96BH1 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC5.29□□□□□ -1.56
RNF25Q96BH1 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
RNF25Q96BH1 RNA5SP183-201ENST00000362452 119 ntBASIC5.29□□□□□ -1.56
RNF25Q96BH1 Y_RNA.328-201ENST00000365208 113 ntBASIC5.29□□□□□ -1.56
RNF25Q96BH1 RNU6-1292P-201ENST00000383856 107 ntBASIC5.29□□□□□ -1.56
RNF25Q96BH1 HMGN2P8-201ENST00000391458 268 ntBASIC5.29□□□□□ -1.56
RNF25Q96BH1 SDHCP2-201ENST00000398565 501 ntBASIC5.29□□□□□ -1.56
RNF25Q96BH1 AL031121.1-201ENST00000406553 254 ntBASIC5.29□□□□□ -1.56
RNF25Q96BH1 AC007064.1-201ENST00000412238 351 ntBASIC5.29□□□□□ -1.56
RNF25Q96BH1 RPL30P4-201ENST00000429309 333 ntBASIC5.29□□□□□ -1.56
RNF25Q96BH1 BX323845.1-201ENST00000432417 179 ntBASIC5.29□□□□□ -1.56
RNF25Q96BH1 RNU6-970P-201ENST00000516312 107 ntBASIC5.29□□□□□ -1.56
RNF25Q96BH1 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC5.29□□□□□ -1.56
RNF25Q96BH1 PRELID2P1-201ENST00000552837 301 ntBASIC5.29□□□□□ -1.56
RNF25Q96BH1 AP001318.4-201ENST00000616637 121 ntBASIC5.29□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 108.5 ms