Protein–RNA interactions for Protein: Q6NVV7

CDPF1, Cysteine-rich DPF motif domain-containing protein 1, humanhuman

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDPF1Q6NVV7 SNORA18.2-201ENST00000383865 132 ntBASIC3.62□□□□□ -1.83
CDPF1Q6NVV7 RNU2-37P-201ENST00000410695 177 ntBASIC3.62□□□□□ -1.83
CDPF1Q6NVV7 RNA5SP306-201ENST00000411087 107 ntBASIC3.62□□□□□ -1.83
CDPF1Q6NVV7 AIMP1P2-201ENST00000425294 312 ntBASIC3.62□□□□□ -1.83
CDPF1Q6NVV7 AL592156.1-201ENST00000508758 304 ntBASIC3.62□□□□□ -1.83
CDPF1Q6NVV7 RNA5SP76-201ENST00000516277 87 ntBASIC3.62□□□□□ -1.83
CDPF1Q6NVV7 RNU2-58P-201ENST00000516403 183 ntBASIC3.62□□□□□ -1.83
CDPF1Q6NVV7 Y_RNA.709-201ENST00000516952 92 ntBASIC3.62□□□□□ -1.83
CDPF1Q6NVV7 RN7SKP289-201ENST00000517244 295 ntBASIC3.62□□□□□ -1.83
CDPF1Q6NVV7 AC039056.1-201ENST00000552704 467 ntTSL 3 BASIC3.62□□□□□ -1.83
CDPF1Q6NVV7 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC3.62□□□□□ -1.83
CDPF1Q6NVV7 MIR6798-201ENST00000612887 67 ntBASIC3.62□□□□□ -1.83
CDPF1Q6NVV7 MIR6129-201ENST00000616087 109 ntBASIC3.62□□□□□ -1.83
CDPF1Q6NVV7 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC3.62□□□□□ -1.83
CDPF1Q6NVV7 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
CDPF1Q6NVV7 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
CDPF1Q6NVV7 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC3.62□□□□□ -1.83
CDPF1Q6NVV7 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.62□□□□□ -1.83
CDPF1Q6NVV7 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC3.62□□□□□ -1.83
CDPF1Q6NVV7 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC3.62□□□□□ -1.83
CDPF1Q6NVV7 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC3.62□□□□□ -1.83
CDPF1Q6NVV7 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
CDPF1Q6NVV7 CENPCP1-201ENST00000533085 2578 ntBASIC3.61□□□□□ -1.83
CDPF1Q6NVV7 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC3.61□□□□□ -1.83
CDPF1Q6NVV7 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
CDPF1Q6NVV7 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC3.61□□□□□ -1.83
CDPF1Q6NVV7 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
CDPF1Q6NVV7 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
CDPF1Q6NVV7 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC3.61□□□□□ -1.83
CDPF1Q6NVV7 AC010300.1-201ENST00000600671 5134 ntBASIC3.61□□□□□ -1.83
CDPF1Q6NVV7 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC3.61□□□□□ -1.83
CDPF1Q6NVV7 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
CDPF1Q6NVV7 RNA5SP305-201ENST00000362665 119 ntBASIC3.61□□□□□ -1.83
CDPF1Q6NVV7 ACEA_U3.1-201ENST00000363057 217 ntBASIC3.61□□□□□ -1.83
CDPF1Q6NVV7 RNA5SP335-201ENST00000363817 110 ntBASIC3.61□□□□□ -1.83
CDPF1Q6NVV7 RNU6-755P-201ENST00000364400 103 ntBASIC3.61□□□□□ -1.83
CDPF1Q6NVV7 SNORD6-201ENST00000365444 73 ntBASIC3.61□□□□□ -1.83
CDPF1Q6NVV7 MIR765-201ENST00000390226 114 ntBASIC3.61□□□□□ -1.83
CDPF1Q6NVV7 IGLV7-43-201ENST00000390298 385 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
CDPF1Q6NVV7 RNA5SP339-201ENST00000390987 122 ntBASIC3.61□□□□□ -1.83
CDPF1Q6NVV7 AL133475.1-201ENST00000404414 305 ntBASIC3.61□□□□□ -1.83
CDPF1Q6NVV7 AL139281.1-201ENST00000422120 335 ntBASIC3.61□□□□□ -1.83
CDPF1Q6NVV7 AC108075.1-201ENST00000424692 529 ntBASIC3.61□□□□□ -1.83
CDPF1Q6NVV7 HMGN2P20-201ENST00000437531 273 ntBASIC3.61□□□□□ -1.83
CDPF1Q6NVV7 AL357134.1-201ENST00000445848 426 ntBASIC3.61□□□□□ -1.83
CDPF1Q6NVV7 RN7SL222P-201ENST00000476452 299 ntBASIC3.61□□□□□ -1.83
CDPF1Q6NVV7 RN7SL826P-201ENST00000479724 288 ntBASIC3.61□□□□□ -1.83
CDPF1Q6NVV7 SRIP1-201ENST00000489235 288 ntBASIC3.61□□□□□ -1.83
CDPF1Q6NVV7 RNA5SP73-201ENST00000516744 108 ntBASIC3.61□□□□□ -1.83
CDPF1Q6NVV7 SCARNA16.4-201ENST00000516956 187 ntBASIC3.61□□□□□ -1.83
CDPF1Q6NVV7 IGKV2D-19-201ENST00000523346 262 ntBASIC3.61□□□□□ -1.83
CDPF1Q6NVV7 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC3.61□□□□□ -1.83
CDPF1Q6NVV7 AL360157.1-201ENST00000565962 87 ntBASIC3.61□□□□□ -1.83
CDPF1Q6NVV7 MIR4646-201ENST00000580775 63 ntBASIC3.61□□□□□ -1.83
CDPF1Q6NVV7 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
CDPF1Q6NVV7 MIR3609-201ENST00000582661 80 ntBASIC3.61□□□□□ -1.83
CDPF1Q6NVV7 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC3.61□□□□□ -1.83
CDPF1Q6NVV7 AC023043.3-201ENST00000593113 385 ntBASIC3.61□□□□□ -1.83
CDPF1Q6NVV7 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC3.61□□□□□ -1.83
CDPF1Q6NVV7 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC3.61□□□□□ -1.83
CDPF1Q6NVV7 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC3.61□□□□□ -1.83
CDPF1Q6NVV7 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC3.61□□□□□ -1.83
CDPF1Q6NVV7 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
CDPF1Q6NVV7 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC3.61□□□□□ -1.83
CDPF1Q6NVV7 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC3.6□□□□□ -1.83
CDPF1Q6NVV7 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC3.6□□□□□ -1.83
CDPF1Q6NVV7 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC3.6□□□□□ -1.83
CDPF1Q6NVV7 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
CDPF1Q6NVV7 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.6□□□□□ -1.83
CDPF1Q6NVV7 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC3.6□□□□□ -1.83
CDPF1Q6NVV7 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
CDPF1Q6NVV7 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
CDPF1Q6NVV7 AC027290.2-201ENST00000623210 18662 ntBASIC3.6□□□□□ -1.83
CDPF1Q6NVV7 SNORD114-7-201ENST00000362520 77 ntBASIC3.6□□□□□ -1.83
CDPF1Q6NVV7 SNORD114-19-201ENST00000363072 75 ntBASIC3.6□□□□□ -1.83
CDPF1Q6NVV7 RNY1P11-201ENST00000363759 113 ntBASIC3.6□□□□□ -1.83
CDPF1Q6NVV7 RNU6-915P-201ENST00000364943 103 ntBASIC3.6□□□□□ -1.83
CDPF1Q6NVV7 Z98941.1-201ENST00000407764 100 ntBASIC3.6□□□□□ -1.83
CDPF1Q6NVV7 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC3.6□□□□□ -1.83
CDPF1Q6NVV7 AC023141.4-201ENST00000412031 328 ntBASIC3.6□□□□□ -1.83
CDPF1Q6NVV7 AL691482.1-201ENST00000453255 87 ntBASIC3.6□□□□□ -1.83
CDPF1Q6NVV7 RPS3P1-201ENST00000456781 192 ntBASIC3.6□□□□□ -1.83
CDPF1Q6NVV7 AL441985.1-201ENST00000457727 251 ntBASIC3.6□□□□□ -1.83
CDPF1Q6NVV7 AC016925.1-201ENST00000458303 298 ntBASIC3.6□□□□□ -1.83
CDPF1Q6NVV7 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC3.6□□□□□ -1.83
CDPF1Q6NVV7 AC105137.1-201ENST00000484355 562 ntBASIC3.6□□□□□ -1.83
CDPF1Q6NVV7 RN7SL97P-201ENST00000486780 299 ntBASIC3.6□□□□□ -1.83
CDPF1Q6NVV7 AC072052.1-201ENST00000496556 306 ntBASIC3.6□□□□□ -1.83
CDPF1Q6NVV7 RN7SL558P-201ENST00000497468 299 ntBASIC3.6□□□□□ -1.83
CDPF1Q6NVV7 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC3.6□□□□□ -1.83
CDPF1Q6NVV7 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC3.6□□□□□ -1.83
CDPF1Q6NVV7 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC3.6□□□□□ -1.83
CDPF1Q6NVV7 AC000068.2-201ENST00000608816 460 ntBASIC3.6□□□□□ -1.83
CDPF1Q6NVV7 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC3.6□□□□□ -1.83
CDPF1Q6NVV7 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC3.6□□□□□ -1.83
CDPF1Q6NVV7 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC3.6□□□□□ -1.83
CDPF1Q6NVV7 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
CDPF1Q6NVV7 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
CDPF1Q6NVV7 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
CDPF1Q6NVV7 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 109.1 ms