Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC5.13□□□□□ -1.59
VARS2Q5ST30 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
VARS2Q5ST30 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
VARS2Q5ST30 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
VARS2Q5ST30 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
VARS2Q5ST30 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
VARS2Q5ST30 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC5.12□□□□□ -1.59
VARS2Q5ST30 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
VARS2Q5ST30 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
VARS2Q5ST30 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
VARS2Q5ST30 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
VARS2Q5ST30 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
VARS2Q5ST30 RNU6-1138P-201ENST00000365359 106 ntBASIC5.12□□□□□ -1.59
VARS2Q5ST30 Y_RNA.486-201ENST00000384398 107 ntBASIC5.12□□□□□ -1.59
VARS2Q5ST30 MIR1290-201ENST00000408735 78 ntBASIC5.12□□□□□ -1.59
VARS2Q5ST30 AC007738.1-201ENST00000413892 348 ntBASIC5.12□□□□□ -1.59
VARS2Q5ST30 AC099548.1-201ENST00000421443 426 ntBASIC5.12□□□□□ -1.59
VARS2Q5ST30 SNORD11-201ENST00000459124 84 ntBASIC5.12□□□□□ -1.59
VARS2Q5ST30 RN7SL517P-201ENST00000462240 305 ntBASIC5.12□□□□□ -1.59
VARS2Q5ST30 AC093663.1-201ENST00000497190 394 ntBASIC5.12□□□□□ -1.59
VARS2Q5ST30 RN7SL558P-201ENST00000497468 299 ntBASIC5.12□□□□□ -1.59
VARS2Q5ST30 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC5.12□□□□□ -1.59
VARS2Q5ST30 RNU6ATAC12P-201ENST00000516542 115 ntBASIC5.12□□□□□ -1.59
VARS2Q5ST30 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC5.12□□□□□ -1.59
VARS2Q5ST30 RPL23AP91-201ENST00000569211 455 ntBASIC5.12□□□□□ -1.59
VARS2Q5ST30 MIR3160-1-201ENST00000577972 85 ntBASIC5.12□□□□□ -1.59
VARS2Q5ST30 MIR5699-201ENST00000578903 90 ntBASIC5.12□□□□□ -1.59
VARS2Q5ST30 MIR5006-201ENST00000583027 110 ntBASIC5.12□□□□□ -1.59
VARS2Q5ST30 AC012531.4-201ENST00000616509 177 ntBASIC5.12□□□□□ -1.59
VARS2Q5ST30 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC5.12□□□□□ -1.59
VARS2Q5ST30 AC104623.2-202ENST00000623477 4002 ntBASIC5.12□□□□□ -1.59
VARS2Q5ST30 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC5.12□□□□□ -1.59
VARS2Q5ST30 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
VARS2Q5ST30 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC5.12□□□□□ -1.59
VARS2Q5ST30 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
VARS2Q5ST30 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
VARS2Q5ST30 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
VARS2Q5ST30 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC5.11□□□□□ -1.59
VARS2Q5ST30 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC5.11□□□□□ -1.59
VARS2Q5ST30 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC5.11□□□□□ -1.59
VARS2Q5ST30 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC5.11□□□□□ -1.59
VARS2Q5ST30 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
VARS2Q5ST30 RNU6-486P-201ENST00000363116 107 ntBASIC5.11□□□□□ -1.59
VARS2Q5ST30 RNU6-622P-201ENST00000384272 103 ntBASIC5.11□□□□□ -1.59
VARS2Q5ST30 RNU6-816P-201ENST00000390914 107 ntBASIC5.11□□□□□ -1.59
VARS2Q5ST30 RNU6-1268P-201ENST00000391214 107 ntBASIC5.11□□□□□ -1.59
VARS2Q5ST30 SNORA57.1-201ENST00000391227 145 ntBASIC5.11□□□□□ -1.59
VARS2Q5ST30 RNU6-1239P-201ENST00000391310 107 ntBASIC5.11□□□□□ -1.59
VARS2Q5ST30 EI24P2-201ENST00000397776 1076 ntBASIC5.11□□□□□ -1.59
VARS2Q5ST30 AL121890.1-201ENST00000435457 205 ntBASIC5.11□□□□□ -1.59
VARS2Q5ST30 AC018634.1-201ENST00000437554 401 ntBASIC5.11□□□□□ -1.59
VARS2Q5ST30 AC105137.2-201ENST00000569073 466 ntBASIC5.11□□□□□ -1.59
VARS2Q5ST30 AC009163.5-201ENST00000575421 637 ntBASIC5.11□□□□□ -1.59
VARS2Q5ST30 MIR92B-201ENST00000607575 96 ntBASIC5.11□□□□□ -1.59
VARS2Q5ST30 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC5.11□□□□□ -1.59
VARS2Q5ST30 AP001005.3-201ENST00000622049 129 ntBASIC5.11□□□□□ -1.59
VARS2Q5ST30 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC5.11□□□□□ -1.59
VARS2Q5ST30 BCLAF1P2-201ENST00000624956 2609 ntBASIC5.11□□□□□ -1.59
VARS2Q5ST30 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC5.11□□□□□ -1.59
VARS2Q5ST30 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC5.11□□□□□ -1.59
VARS2Q5ST30 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
VARS2Q5ST30 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC5.11□□□□□ -1.59
VARS2Q5ST30 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
VARS2Q5ST30 AC015813.6-201ENST00000624409 5808 ntBASIC5.11□□□□□ -1.59
VARS2Q5ST30 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC5.11□□□□□ -1.59
VARS2Q5ST30 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC5.1□□□□□ -1.59
VARS2Q5ST30 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
VARS2Q5ST30 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC5.1□□□□□ -1.59
VARS2Q5ST30 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
VARS2Q5ST30 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
VARS2Q5ST30 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
VARS2Q5ST30 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC5.1□□□□□ -1.59
VARS2Q5ST30 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC5.1□□□□□ -1.59
VARS2Q5ST30 RNU6-170P-201ENST00000362832 104 ntBASIC5.1□□□□□ -1.59
VARS2Q5ST30 Y_RNA.94-201ENST00000363068 106 ntBASIC5.1□□□□□ -1.59
VARS2Q5ST30 RNU6-778P-201ENST00000363269 103 ntBASIC5.1□□□□□ -1.59
VARS2Q5ST30 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
VARS2Q5ST30 SNORD38C-201ENST00000384381 69 ntBASIC5.1□□□□□ -1.59
VARS2Q5ST30 AL355796.1-201ENST00000406706 323 ntBASIC5.1□□□□□ -1.59
VARS2Q5ST30 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC5.1□□□□□ -1.59
VARS2Q5ST30 RNA5SP201-201ENST00000410316 124 ntBASIC5.1□□□□□ -1.59
VARS2Q5ST30 RN7SKP267-201ENST00000410381 285 ntBASIC5.1□□□□□ -1.59
VARS2Q5ST30 Y_RNA.620-201ENST00000411009 88 ntBASIC5.1□□□□□ -1.59
VARS2Q5ST30 BTF3P4-201ENST00000418852 495 ntBASIC5.1□□□□□ -1.59
VARS2Q5ST30 RPS26P55-201ENST00000471178 356 ntBASIC5.1□□□□□ -1.59
VARS2Q5ST30 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC5.1□□□□□ -1.59
VARS2Q5ST30 AC073073.1-201ENST00000493920 463 ntBASIC5.1□□□□□ -1.59
VARS2Q5ST30 AIG1P1-201ENST00000503376 148 ntBASIC5.1□□□□□ -1.59
VARS2Q5ST30 MLLT10P2-201ENST00000506434 249 ntBASIC5.1□□□□□ -1.59
VARS2Q5ST30 RNU1-6P-201ENST00000516290 144 ntBASIC5.1□□□□□ -1.59
VARS2Q5ST30 RNU6-795P-201ENST00000516323 103 ntBASIC5.1□□□□□ -1.59
VARS2Q5ST30 RNU6-709P-201ENST00000517257 104 ntBASIC5.1□□□□□ -1.59
VARS2Q5ST30 RNU4ATAC17P-201ENST00000517272 120 ntBASIC5.1□□□□□ -1.59
VARS2Q5ST30 MIR4715-201ENST00000584117 79 ntBASIC5.1□□□□□ -1.59
VARS2Q5ST30 PCGEM1.1-201ENST00000613431 131 ntBASIC5.1□□□□□ -1.59
VARS2Q5ST30 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC5.1□□□□□ -1.59
VARS2Q5ST30 AL021997.2-201ENST00000615674 271 ntBASIC5.1□□□□□ -1.59
VARS2Q5ST30 FAS-AS1.2-201ENST00000620386 170 ntBASIC5.1□□□□□ -1.59
VARS2Q5ST30 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC5.1□□□□□ -1.59
VARS2Q5ST30 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 104.8 ms