Protein–RNA interactions for Protein: P49642

PRIM1, DNA primase small subunit, humanhuman

Known RBP Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRIM1P49642 NOL8P1-201ENST00000508336 3529 ntBASIC5.45□□□□□ -1.54
PRIM1P49642 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC5.45□□□□□ -1.54
PRIM1P49642 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
PRIM1P49642 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
PRIM1P49642 RNU6-525P-201ENST00000363685 104 ntBASIC5.44□□□□□ -1.54
PRIM1P49642 RNU6-801P-201ENST00000364087 105 ntBASIC5.44□□□□□ -1.54
PRIM1P49642 RNU6-755P-201ENST00000364400 103 ntBASIC5.44□□□□□ -1.54
PRIM1P49642 RNY4P18-201ENST00000391107 89 ntBASIC5.44□□□□□ -1.54
PRIM1P49642 RNU6-1197P-201ENST00000391183 107 ntBASIC5.44□□□□□ -1.54
PRIM1P49642 MIR921-201ENST00000401133 56 ntBASIC5.44□□□□□ -1.54
PRIM1P49642 RPL39P29-201ENST00000447779 157 ntBASIC5.44□□□□□ -1.54
PRIM1P49642 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC5.44□□□□□ -1.54
PRIM1P49642 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC5.44□□□□□ -1.54
PRIM1P49642 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
PRIM1P49642 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
PRIM1P49642 AC107918.3-201ENST00000533272 382 ntBASIC5.44□□□□□ -1.54
PRIM1P49642 AL133383.2-201ENST00000622958 2336 ntBASIC5.44□□□□□ -1.54
PRIM1P49642 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
PRIM1P49642 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC5.44□□□□□ -1.54
PRIM1P49642 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
PRIM1P49642 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
PRIM1P49642 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
PRIM1P49642 AC000123.3-201ENST00000624029 4975 ntBASIC5.43□□□□□ -1.54
PRIM1P49642 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC5.43□□□□□ -1.54
PRIM1P49642 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC5.43□□□□□ -1.54
PRIM1P49642 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC5.43□□□□□ -1.54
PRIM1P49642 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
PRIM1P49642 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
PRIM1P49642 Y_RNA.309-201ENST00000365046 111 ntBASIC5.43□□□□□ -1.54
PRIM1P49642 RNU6-1280P-201ENST00000365211 107 ntBASIC5.43□□□□□ -1.54
PRIM1P49642 RNU6-643P-201ENST00000384018 107 ntBASIC5.43□□□□□ -1.54
PRIM1P49642 YPEL5P1-201ENST00000419731 367 ntBASIC5.43□□□□□ -1.54
PRIM1P49642 AL121914.1-201ENST00000450188 156 ntBASIC5.43□□□□□ -1.54
PRIM1P49642 EEF1B2P7-201ENST00000451177 676 ntBASIC5.43□□□□□ -1.54
PRIM1P49642 RPS29P19-201ENST00000479709 171 ntBASIC5.43□□□□□ -1.54
PRIM1P49642 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC5.43□□□□□ -1.54
PRIM1P49642 AC006064.5-201ENST00000541782 248 ntBASIC5.43□□□□□ -1.54
PRIM1P49642 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC5.43□□□□□ -1.54
PRIM1P49642 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC5.43□□□□□ -1.54
PRIM1P49642 AC005520.5-201ENST00000613926 164 ntBASIC5.43□□□□□ -1.54
PRIM1P49642 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC5.43□□□□□ -1.54
PRIM1P49642 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
PRIM1P49642 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC5.43□□□□□ -1.54
PRIM1P49642 MAPK10-303ENST00000641324 3959 ntBASIC5.42□□□□□ -1.54
PRIM1P49642 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
PRIM1P49642 SUPT16HP1-201ENST00000537175 3133 ntBASIC5.42□□□□□ -1.54
PRIM1P49642 AC139713.2-215ENST00000641428 5037 ntBASIC5.42□□□□□ -1.54
PRIM1P49642 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
PRIM1P49642 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
PRIM1P49642 RNU6-1255P-201ENST00000363434 112 ntBASIC5.42□□□□□ -1.54
PRIM1P49642 snoU2_19.4-201ENST00000364329 80 ntBASIC5.42□□□□□ -1.54
PRIM1P49642 SNORA72.4-201ENST00000384174 132 ntBASIC5.42□□□□□ -1.54
PRIM1P49642 RNU6-1144P-201ENST00000384247 104 ntBASIC5.42□□□□□ -1.54
PRIM1P49642 MIR124-3-201ENST00000384866 87 ntBASIC5.42□□□□□ -1.54
PRIM1P49642 MIR7-3-201ENST00000384898 110 ntBASIC5.42□□□□□ -1.54
PRIM1P49642 RNU6-1228P-201ENST00000391014 107 ntBASIC5.42□□□□□ -1.54
PRIM1P49642 FTH1P15-201ENST00000406984 280 ntBASIC5.42□□□□□ -1.54
PRIM1P49642 Y_RNA.712-201ENST00000517011 92 ntBASIC5.42□□□□□ -1.54
PRIM1P49642 IGLV3-26-201ENST00000520756 302 ntBASIC5.42□□□□□ -1.54
PRIM1P49642 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC5.42□□□□□ -1.54
PRIM1P49642 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC5.42□□□□□ -1.54
PRIM1P49642 AC027176.1-201ENST00000560204 514 ntBASIC5.42□□□□□ -1.54
PRIM1P49642 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC5.42□□□□□ -1.54
PRIM1P49642 AC005255.1-201ENST00000593748 216 ntBASIC5.42□□□□□ -1.54
PRIM1P49642 MIR6844-201ENST00000637122 62 ntBASIC5.42□□□□□ -1.54
PRIM1P49642 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC5.42□□□□□ -1.54
PRIM1P49642 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
PRIM1P49642 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC5.42□□□□□ -1.54
PRIM1P49642 AP000542.2-201ENST00000623199 6179 ntBASIC5.42□□□□□ -1.54
PRIM1P49642 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
PRIM1P49642 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
PRIM1P49642 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
PRIM1P49642 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
PRIM1P49642 AC068254.2-201ENST00000623938 3577 ntBASIC5.41□□□□□ -1.54
PRIM1P49642 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC5.41□□□□□ -1.54
PRIM1P49642 AF127577.6-201ENST00000623352 2191 ntBASIC5.41□□□□□ -1.54
PRIM1P49642 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC5.41□□□□□ -1.54
PRIM1P49642 AC019205.3-201ENST00000424573 156 ntBASIC5.41□□□□□ -1.54
PRIM1P49642 RPL23AP46-201ENST00000438548 490 ntBASIC5.41□□□□□ -1.54
PRIM1P49642 RNA5SP360-201ENST00000516555 118 ntBASIC5.41□□□□□ -1.54
PRIM1P49642 RNU6-1007P-201ENST00000516586 107 ntBASIC5.41□□□□□ -1.54
PRIM1P49642 Y_RNA.709-201ENST00000516952 92 ntBASIC5.41□□□□□ -1.54
PRIM1P49642 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC5.41□□□□□ -1.54
PRIM1P49642 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC5.41□□□□□ -1.54
PRIM1P49642 RPL23AP97-201ENST00000568955 471 ntBASIC5.41□□□□□ -1.54
PRIM1P49642 MIR7154-201ENST00000620673 73 ntBASIC5.41□□□□□ -1.54
PRIM1P49642 AC002543.1-201ENST00000299783 1954 ntBASIC5.41□□□□□ -1.54
PRIM1P49642 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
PRIM1P49642 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
PRIM1P49642 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC5.41□□□□□ -1.54
PRIM1P49642 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC5.41□□□□□ -1.54
PRIM1P49642 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
PRIM1P49642 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC5.4□□□□□ -1.54
PRIM1P49642 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
PRIM1P49642 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC5.4□□□□□ -1.54
PRIM1P49642 LDHAL6CP-202ENST00000550738 3224 ntBASIC5.4□□□□□ -1.54
PRIM1P49642 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC5.4□□□□□ -1.54
PRIM1P49642 RNU6-144P-201ENST00000383951 107 ntBASIC5.4□□□□□ -1.54
PRIM1P49642 SNORD66.1-201ENST00000391230 76 ntBASIC5.4□□□□□ -1.54
PRIM1P49642 HSPE1P12-201ENST00000412576 301 ntBASIC5.4□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 110.3 ms