Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 MIR3923-201ENST00000579521 83 ntBASIC4.6□□□□□ -1.67
VARSP26640 AL020997.2-201ENST00000602607 184 ntBASIC4.6□□□□□ -1.67
VARSP26640 AC120024.3-201ENST00000603167 156 ntBASIC4.6□□□□□ -1.67
VARSP26640 SNORD11B-201ENST00000607707 90 ntBASIC4.6□□□□□ -1.67
VARSP26640 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
VARSP26640 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC4.6□□□□□ -1.67
VARSP26640 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
VARSP26640 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC4.6□□□□□ -1.67
VARSP26640 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
VARSP26640 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC4.59□□□□□ -1.67
VARSP26640 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
VARSP26640 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC4.59□□□□□ -1.67
VARSP26640 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
VARSP26640 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
VARSP26640 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC4.59□□□□□ -1.67
VARSP26640 Y_RNA.369-201ENST00000365568 117 ntBASIC4.59□□□□□ -1.67
VARSP26640 MIR548A3-201ENST00000385297 97 ntBASIC4.59□□□□□ -1.67
VARSP26640 RNY4P30-201ENST00000410216 95 ntBASIC4.59□□□□□ -1.67
VARSP26640 Y_RNA.622-201ENST00000411091 108 ntBASIC4.59□□□□□ -1.67
VARSP26640 RN7SKP100-201ENST00000411258 284 ntBASIC4.59□□□□□ -1.67
VARSP26640 RPL18P10-201ENST00000425606 538 ntBASIC4.59□□□□□ -1.67
VARSP26640 AL158147.1-201ENST00000443970 75 ntBASIC4.59□□□□□ -1.67
VARSP26640 Y_RNA.651-201ENST00000459380 103 ntBASIC4.59□□□□□ -1.67
VARSP26640 RPL30P5-201ENST00000494923 336 ntBASIC4.59□□□□□ -1.67
VARSP26640 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC4.59□□□□□ -1.67
VARSP26640 RNU2-58P-201ENST00000516403 183 ntBASIC4.59□□□□□ -1.67
VARSP26640 RNU1-117P-201ENST00000517041 158 ntBASIC4.59□□□□□ -1.67
VARSP26640 AP001880.2-201ENST00000538233 448 ntBASIC4.59□□□□□ -1.67
VARSP26640 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC4.59□□□□□ -1.67
VARSP26640 MIR3136-201ENST00000583498 78 ntBASIC4.59□□□□□ -1.67
VARSP26640 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC4.59□□□□□ -1.67
VARSP26640 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
VARSP26640 AC140113.4-201ENST00000622087 222 ntBASIC4.59□□□□□ -1.67
VARSP26640 AC018692.3-201ENST00000623929 123 ntBASIC4.59□□□□□ -1.67
VARSP26640 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
VARSP26640 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC4.59□□□□□ -1.67
VARSP26640 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
VARSP26640 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
VARSP26640 USP8P1-201ENST00000494673 3183 ntBASIC4.58□□□□□ -1.68
VARSP26640 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
VARSP26640 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
VARSP26640 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC4.58□□□□□ -1.68
VARSP26640 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
VARSP26640 RNA5SP515-201ENST00000364570 118 ntBASIC4.58□□□□□ -1.68
VARSP26640 RNA5SP505-201ENST00000364748 108 ntBASIC4.58□□□□□ -1.68
VARSP26640 RNU6-597P-201ENST00000365620 102 ntBASIC4.58□□□□□ -1.68
VARSP26640 RNU6-1336P-201ENST00000383886 109 ntBASIC4.58□□□□□ -1.68
VARSP26640 SNORA48.5-201ENST00000391143 135 ntBASIC4.58□□□□□ -1.68
VARSP26640 MIR1302-4-201ENST00000408701 150 ntBASIC4.58□□□□□ -1.68
VARSP26640 NDUFS5P4-201ENST00000412983 318 ntBASIC4.58□□□□□ -1.68
VARSP26640 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC4.58□□□□□ -1.68
VARSP26640 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC4.58□□□□□ -1.68
VARSP26640 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC4.58□□□□□ -1.68
VARSP26640 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC4.58□□□□□ -1.68
VARSP26640 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC4.58□□□□□ -1.68
VARSP26640 RPS27AP10-201ENST00000496103 208 ntBASIC4.58□□□□□ -1.68
VARSP26640 RPL31P61-201ENST00000496160 376 ntBASIC4.58□□□□□ -1.68
VARSP26640 AIG1P1-201ENST00000503376 148 ntBASIC4.58□□□□□ -1.68
VARSP26640 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC4.58□□□□□ -1.68
VARSP26640 POC1B-211ENST00000549504 581 ntTSL 5 BASIC4.58□□□□□ -1.68
VARSP26640 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC4.58□□□□□ -1.68
VARSP26640 AC039056.2-201ENST00000622261 511 ntBASIC4.58□□□□□ -1.68
VARSP26640 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC4.58□□□□□ -1.68
VARSP26640 AC022336.2-201ENST00000568966 2538 ntBASIC4.58□□□□□ -1.68
VARSP26640 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC4.58□□□□□ -1.68
VARSP26640 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC4.58□□□□□ -1.68
VARSP26640 SCN1A-220ENST00000641603 12506 ntBASIC4.58□□□□□ -1.68
VARSP26640 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC4.58□□□□□ -1.68
VARSP26640 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC4.57□□□□□ -1.68
VARSP26640 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC4.57□□□□□ -1.68
VARSP26640 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC4.57□□□□□ -1.68
VARSP26640 Z82209.1-201ENST00000422141 2135 ntBASIC4.57□□□□□ -1.68
VARSP26640 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
VARSP26640 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
VARSP26640 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC4.57□□□□□ -1.68
VARSP26640 MIR450A1-201ENST00000362262 91 ntBASIC4.57□□□□□ -1.68
VARSP26640 U8.1-201ENST00000362843 134 ntBASIC4.57□□□□□ -1.68
VARSP26640 RNU1-20P-201ENST00000363314 162 ntBASIC4.57□□□□□ -1.68
VARSP26640 RNU6-32P-201ENST00000383948 107 ntBASIC4.57□□□□□ -1.68
VARSP26640 RNU6-13P-201ENST00000384248 107 ntBASIC4.57□□□□□ -1.68
VARSP26640 RNU6-12P-201ENST00000384604 107 ntBASIC4.57□□□□□ -1.68
VARSP26640 RNU6-41P-201ENST00000384741 107 ntBASIC4.57□□□□□ -1.68
VARSP26640 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
VARSP26640 RNA5SP39-201ENST00000411245 120 ntBASIC4.57□□□□□ -1.68
VARSP26640 AC004866.1-201ENST00000411748 78 ntBASIC4.57□□□□□ -1.68
VARSP26640 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC4.57□□□□□ -1.68
VARSP26640 HSPE1P21-201ENST00000438283 308 ntBASIC4.57□□□□□ -1.68
VARSP26640 RPS29P20-201ENST00000489592 171 ntBASIC4.57□□□□□ -1.68
VARSP26640 RNU6-344P-201ENST00000516635 111 ntBASIC4.57□□□□□ -1.68
VARSP26640 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
VARSP26640 snoZ196.1-201ENST00000625269 89 ntBASIC4.57□□□□□ -1.68
VARSP26640 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC4.57□□□□□ -1.68
VARSP26640 U6.115-201ENST00000636045 103 ntBASIC4.57□□□□□ -1.68
VARSP26640 AC068205.3-201ENST00000636385 468 ntBASIC4.57□□□□□ -1.68
VARSP26640 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC4.57□□□□□ -1.68
VARSP26640 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
VARSP26640 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC4.57□□□□□ -1.68
VARSP26640 AC011266.1-201ENST00000624119 3569 ntBASIC4.57□□□□□ -1.68
VARSP26640 MFSD8-216ENST00000641147 4009 ntBASIC4.56□□□□□ -1.68
VARSP26640 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC4.56□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 121 ms