Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 GHR-207ENST00000537449 4419 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
VARS2Q5ST30 RNU6-590P-201ENST00000365039 107 ntBASIC5.16□□□□□ -1.58
VARS2Q5ST30 SNORA67.2-201ENST00000384300 149 ntBASIC5.16□□□□□ -1.58
VARS2Q5ST30 RPL27AP8-201ENST00000424277 446 ntBASIC5.16□□□□□ -1.58
VARS2Q5ST30 AC004941.2-201ENST00000427009 228 ntBASIC5.16□□□□□ -1.58
VARS2Q5ST30 RN7SL41P-201ENST00000476144 297 ntBASIC5.16□□□□□ -1.58
VARS2Q5ST30 AC108022.1-201ENST00000493466 478 ntBASIC5.16□□□□□ -1.58
VARS2Q5ST30 AC026402.1-201ENST00000513642 170 ntBASIC5.16□□□□□ -1.58
VARS2Q5ST30 ENPP7P9-201ENST00000514456 627 ntBASIC5.16□□□□□ -1.58
VARS2Q5ST30 RNU6-240P-201ENST00000516098 97 ntBASIC5.16□□□□□ -1.58
VARS2Q5ST30 RNU6-1149P-201ENST00000516810 97 ntBASIC5.16□□□□□ -1.58
VARS2Q5ST30 AC006349.1-201ENST00000555526 235 ntBASIC5.16□□□□□ -1.58
VARS2Q5ST30 MIR3136-201ENST00000583498 78 ntBASIC5.16□□□□□ -1.58
VARS2Q5ST30 AC006133.1-201ENST00000617106 264 ntBASIC5.16□□□□□ -1.58
VARS2Q5ST30 AC002064.3-201ENST00000623448 346 ntBASIC5.16□□□□□ -1.58
VARS2Q5ST30 AC018692.3-201ENST00000623929 123 ntBASIC5.16□□□□□ -1.58
VARS2Q5ST30 RNF123-214ENST00000629802 207 ntTSL 5 BASIC5.16□□□□□ -1.58
VARS2Q5ST30 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
VARS2Q5ST30 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
VARS2Q5ST30 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
VARS2Q5ST30 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
VARS2Q5ST30 AC005005.4-201ENST00000623789 16698 ntBASIC5.16□□□□□ -1.58
VARS2Q5ST30 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
VARS2Q5ST30 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
VARS2Q5ST30 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
VARS2Q5ST30 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC5.15□□□□□ -1.58
VARS2Q5ST30 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC5.15□□□□□ -1.58
VARS2Q5ST30 AL590240.1-201ENST00000334118 313 ntBASIC5.15□□□□□ -1.59
VARS2Q5ST30 RNU6-1099P-201ENST00000363533 107 ntBASIC5.15□□□□□ -1.59
VARS2Q5ST30 SNORA1-201ENST00000384107 130 ntBASIC5.15□□□□□ -1.59
VARS2Q5ST30 RNU6-938P-201ENST00000411285 103 ntBASIC5.15□□□□□ -1.59
VARS2Q5ST30 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC5.15□□□□□ -1.59
VARS2Q5ST30 AC023449.1-201ENST00000454464 154 ntBASIC5.15□□□□□ -1.59
VARS2Q5ST30 RNU1-103P-201ENST00000516502 125 ntBASIC5.15□□□□□ -1.59
VARS2Q5ST30 MIR3923-201ENST00000579521 83 ntBASIC5.15□□□□□ -1.59
VARS2Q5ST30 RN7SL690P-201ENST00000582087 240 ntBASIC5.15□□□□□ -1.59
VARS2Q5ST30 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC5.15□□□□□ -1.59
VARS2Q5ST30 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC5.15□□□□□ -1.59
VARS2Q5ST30 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
VARS2Q5ST30 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
VARS2Q5ST30 AL022311.1-201ENST00000623726 19416 ntBASIC5.15□□□□□ -1.59
VARS2Q5ST30 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC5.15□□□□□ -1.59
VARS2Q5ST30 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
VARS2Q5ST30 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
VARS2Q5ST30 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
VARS2Q5ST30 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC5.14□□□□□ -1.59
VARS2Q5ST30 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC5.14□□□□□ -1.59
VARS2Q5ST30 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC5.14□□□□□ -1.59
VARS2Q5ST30 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC5.14□□□□□ -1.59
VARS2Q5ST30 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
VARS2Q5ST30 AC008079.2-201ENST00000623543 20396 ntBASIC5.14□□□□□ -1.59
VARS2Q5ST30 Y_RNA.10-201ENST00000362371 110 ntBASIC5.14□□□□□ -1.59
VARS2Q5ST30 RNA5SP390-201ENST00000410191 113 ntBASIC5.14□□□□□ -1.59
VARS2Q5ST30 ATP6V0E1P2-201ENST00000441771 245 ntBASIC5.14□□□□□ -1.59
VARS2Q5ST30 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC5.14□□□□□ -1.59
VARS2Q5ST30 IGHVIII-67-2-201ENST00000519849 88 ntBASIC5.14□□□□□ -1.59
VARS2Q5ST30 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC5.14□□□□□ -1.59
VARS2Q5ST30 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC5.14□□□□□ -1.59
VARS2Q5ST30 MIR4662B-201ENST00000579498 81 ntBASIC5.14□□□□□ -1.59
VARS2Q5ST30 AL121932.1-201ENST00000605542 214 ntBASIC5.14□□□□□ -1.59
VARS2Q5ST30 U2.21-201ENST00000637295 81 ntBASIC5.14□□□□□ -1.59
VARS2Q5ST30 AC006160.2-201ENST00000637708 154 ntBASIC5.14□□□□□ -1.59
VARS2Q5ST30 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
VARS2Q5ST30 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
VARS2Q5ST30 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
VARS2Q5ST30 MED23-203ENST00000368058 4576 ntTSL 5 BASIC5.14□□□□□ -1.59
VARS2Q5ST30 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
VARS2Q5ST30 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
VARS2Q5ST30 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
VARS2Q5ST30 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC5.14□□□□□ -1.59
VARS2Q5ST30 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC5.14□□□□□ -1.59
VARS2Q5ST30 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
VARS2Q5ST30 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC5.13□□□□□ -1.59
VARS2Q5ST30 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
VARS2Q5ST30 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
VARS2Q5ST30 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
VARS2Q5ST30 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC5.13□□□□□ -1.59
VARS2Q5ST30 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
VARS2Q5ST30 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC5.13□□□□□ -1.59
VARS2Q5ST30 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC5.13□□□□□ -1.59
VARS2Q5ST30 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
VARS2Q5ST30 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC5.13□□□□□ -1.59
VARS2Q5ST30 SNORD115-35-201ENST00000365122 82 ntBASIC5.13□□□□□ -1.59
VARS2Q5ST30 SNORA70E-201ENST00000384492 135 ntBASIC5.13□□□□□ -1.59
VARS2Q5ST30 U8.12-201ENST00000384701 133 ntBASIC5.13□□□□□ -1.59
VARS2Q5ST30 MIR548B-201ENST00000385247 97 ntBASIC5.13□□□□□ -1.59
VARS2Q5ST30 MIR1912-201ENST00000410389 80 ntBASIC5.13□□□□□ -1.59
VARS2Q5ST30 AL645608.4-201ENST00000423619 154 ntBASIC5.13□□□□□ -1.59
VARS2Q5ST30 AC027124.2-201ENST00000428249 105 ntBASIC5.13□□□□□ -1.59
VARS2Q5ST30 AC016831.4-201ENST00000438302 307 ntBASIC5.13□□□□□ -1.59
VARS2Q5ST30 RPS26P48-201ENST00000491713 339 ntBASIC5.13□□□□□ -1.59
VARS2Q5ST30 RPL21P129-201ENST00000491732 478 ntBASIC5.13□□□□□ -1.59
VARS2Q5ST30 SCARNA15-202ENST00000516881 127 ntBASIC5.13□□□□□ -1.59
VARS2Q5ST30 RN7SKP209-201ENST00000516888 304 ntBASIC5.13□□□□□ -1.59
VARS2Q5ST30 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC5.13□□□□□ -1.59
VARS2Q5ST30 SNORA74C-1-201ENST00000580726 201 ntBASIC5.13□□□□□ -1.59
VARS2Q5ST30 AC090897.2-201ENST00000581715 130 ntBASIC5.13□□□□□ -1.59
VARS2Q5ST30 UBE2Q2P6-201ENST00000612666 153 ntBASIC5.13□□□□□ -1.59
VARS2Q5ST30 Pinc.1-201ENST00000616452 154 ntBASIC5.13□□□□□ -1.59
VARS2Q5ST30 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC5.13□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 110.3 ms