Protein–RNA interactions for Protein: P41002

CCNF, Cyclin-F, humanhuman

Predictions only

Length 786 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNFP41002 RNU6-198P-201ENST00000384258 104 ntBASIC3.87□□□□□ -1.79
CCNFP41002 MIR199A2-201ENST00000385289 110 ntBASIC3.87□□□□□ -1.79
CCNFP41002 SNORA48.7-201ENST00000391302 135 ntBASIC3.87□□□□□ -1.79
CCNFP41002 RNU1-139P-201ENST00000391307 165 ntBASIC3.87□□□□□ -1.79
CCNFP41002 AC017083.1-201ENST00000428093 483 ntBASIC3.87□□□□□ -1.79
CCNFP41002 AC244670.1-201ENST00000436879 112 ntBASIC3.87□□□□□ -1.79
CCNFP41002 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC3.87□□□□□ -1.79
CCNFP41002 FPGT-203ENST00000467578 601 ntTSL 2 BASIC3.87□□□□□ -1.79
CCNFP41002 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.87□□□□□ -1.79
CCNFP41002 SNORA31.1-201ENST00000515993 133 ntBASIC3.87□□□□□ -1.79
CCNFP41002 SNORA31.5-201ENST00000516190 133 ntBASIC3.87□□□□□ -1.79
CCNFP41002 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC3.87□□□□□ -1.79
CCNFP41002 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
CCNFP41002 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC3.87□□□□□ -1.79
CCNFP41002 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC3.86□□□□□ -1.79
CCNFP41002 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC3.86□□□□□ -1.79
CCNFP41002 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
CCNFP41002 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC3.86□□□□□ -1.79
CCNFP41002 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
CCNFP41002 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
CCNFP41002 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3.86□□□□□ -1.79
CCNFP41002 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
CCNFP41002 RNU6-200P-201ENST00000364743 107 ntBASIC3.86□□□□□ -1.79
CCNFP41002 Y_RNA.352-201ENST00000365439 102 ntBASIC3.86□□□□□ -1.79
CCNFP41002 RNU1-64P-201ENST00000365443 163 ntBASIC3.86□□□□□ -1.79
CCNFP41002 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.86□□□□□ -1.79
CCNFP41002 RNU6-102P-201ENST00000384485 104 ntBASIC3.86□□□□□ -1.79
CCNFP41002 Y_RNA.539-201ENST00000384635 107 ntBASIC3.86□□□□□ -1.79
CCNFP41002 RNU6-1077P-201ENST00000410506 102 ntBASIC3.86□□□□□ -1.79
CCNFP41002 AL159169.1-201ENST00000421119 127 ntBASIC3.86□□□□□ -1.79
CCNFP41002 AL161651.1-201ENST00000440882 223 ntBASIC3.86□□□□□ -1.79
CCNFP41002 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC3.86□□□□□ -1.79
CCNFP41002 RNU7-23P-201ENST00000459465 62 ntBASIC3.86□□□□□ -1.79
CCNFP41002 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC3.86□□□□□ -1.79
CCNFP41002 AP002884.2-201ENST00000471647 395 ntBASIC3.86□□□□□ -1.79
CCNFP41002 RN7SKP83-201ENST00000516512 178 ntBASIC3.86□□□□□ -1.79
CCNFP41002 RN7SKP209-201ENST00000516888 304 ntBASIC3.86□□□□□ -1.79
CCNFP41002 AC027288.2-201ENST00000553028 243 ntBASIC3.86□□□□□ -1.79
CCNFP41002 AC007224.1-201ENST00000564410 144 ntBASIC3.86□□□□□ -1.79
CCNFP41002 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC3.86□□□□□ -1.79
CCNFP41002 AL137849.1-201ENST00000604767 169 ntBASIC3.86□□□□□ -1.79
CCNFP41002 AL138963.2-201ENST00000605137 226 ntBASIC3.86□□□□□ -1.79
CCNFP41002 ZYXP1-201ENST00000617638 118 ntBASIC3.86□□□□□ -1.79
CCNFP41002 HOTTIP_4.1-201ENST00000618195 165 ntBASIC3.86□□□□□ -1.79
CCNFP41002 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
CCNFP41002 AC010680.1-201ENST00000590024 3590 ntBASIC3.86□□□□□ -1.79
CCNFP41002 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC3.86□□□□□ -1.79
CCNFP41002 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.85□□□□□ -1.79
CCNFP41002 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC3.85□□□□□ -1.79
CCNFP41002 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC3.85□□□□□ -1.79
CCNFP41002 MIR10B-201ENST00000385011 110 ntBASIC3.85□□□□□ -1.79
CCNFP41002 Y_RNA.581-201ENST00000391017 97 ntBASIC3.85□□□□□ -1.79
CCNFP41002 RNU4-30P-201ENST00000410245 143 ntBASIC3.85□□□□□ -1.79
CCNFP41002 RNU6-628P-201ENST00000410675 107 ntBASIC3.85□□□□□ -1.79
CCNFP41002 RNU6-1001P-201ENST00000411265 100 ntBASIC3.85□□□□□ -1.79
CCNFP41002 RNU2-64P-201ENST00000411315 191 ntBASIC3.85□□□□□ -1.79
CCNFP41002 AC002075.2-201ENST00000425207 252 ntBASIC3.85□□□□□ -1.79
CCNFP41002 AL117339.2-201ENST00000430475 180 ntBASIC3.85□□□□□ -1.79
CCNFP41002 AC096638.1-201ENST00000444678 216 ntBASIC3.85□□□□□ -1.79
CCNFP41002 AP001025.1-201ENST00000486139 332 ntBASIC3.85□□□□□ -1.79
CCNFP41002 RNA5SP179-201ENST00000517284 121 ntBASIC3.85□□□□□ -1.79
CCNFP41002 IGHVII-62-1-201ENST00000519283 235 ntBASIC3.85□□□□□ -1.79
CCNFP41002 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC3.85□□□□□ -1.79
CCNFP41002 Clostridiales-1.2-201ENST00000636724 160 ntBASIC3.85□□□□□ -1.79
CCNFP41002 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.85□□□□□ -1.79
CCNFP41002 AC004944.1-201ENST00000517807 3059 ntBASIC3.85□□□□□ -1.79
CCNFP41002 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.85□□□□□ -1.79
CCNFP41002 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
CCNFP41002 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
CCNFP41002 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
CCNFP41002 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
CCNFP41002 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.79
CCNFP41002 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC3.84□□□□□ -1.79
CCNFP41002 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC3.84□□□□□ -1.79
CCNFP41002 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC3.84□□□□□ -1.79
CCNFP41002 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC3.84□□□□□ -1.79
CCNFP41002 RNA5SP97-201ENST00000365006 84 ntBASIC3.84□□□□□ -1.79
CCNFP41002 SNORD6-201ENST00000365444 73 ntBASIC3.84□□□□□ -1.79
CCNFP41002 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC3.84□□□□□ -1.79
CCNFP41002 RNU4-70P-201ENST00000384579 139 ntBASIC3.84□□□□□ -1.79
CCNFP41002 AL033519.2-201ENST00000403958 392 ntBASIC3.84□□□□□ -1.79
CCNFP41002 AL133475.1-201ENST00000404414 305 ntBASIC3.84□□□□□ -1.79
CCNFP41002 RNU6-1140P-201ENST00000410517 106 ntBASIC3.84□□□□□ -1.79
CCNFP41002 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC3.84□□□□□ -1.79
CCNFP41002 OR4C10P-201ENST00000434991 931 ntBASIC3.84□□□□□ -1.79
CCNFP41002 TBCAP1-201ENST00000436520 327 ntBASIC3.84□□□□□ -1.79
CCNFP41002 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.84□□□□□ -1.79
CCNFP41002 AC107626.1-201ENST00000471084 183 ntBASIC3.84□□□□□ -1.79
CCNFP41002 GZMAP1-201ENST00000503054 631 ntBASIC3.84□□□□□ -1.79
CCNFP41002 RNU6-58P-201ENST00000517143 103 ntBASIC3.84□□□□□ -1.79
CCNFP41002 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC3.84□□□□□ -1.79
CCNFP41002 AC016256.1-201ENST00000547971 354 ntBASIC3.84□□□□□ -1.79
CCNFP41002 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC3.84□□□□□ -1.79
CCNFP41002 MIR3186-201ENST00000577404 85 ntBASIC3.84□□□□□ -1.79
CCNFP41002 MIR5571-201ENST00000577998 113 ntBASIC3.84□□□□□ -1.79
CCNFP41002 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC3.84□□□□□ -1.79
CCNFP41002 VN1R85P-201ENST00000601587 426 ntBASIC3.84□□□□□ -1.79
CCNFP41002 AC091167.4-201ENST00000605079 184 ntBASIC3.84□□□□□ -1.79
CCNFP41002 MIR6500-201ENST00000622700 86 ntBASIC3.84□□□□□ -1.79
CCNFP41002 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC3.84□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 82.4 ms