Protein–RNA interactions for Protein: P16234

PDGFRA, Platelet-derived growth factor receptor alpha, humanhuman

Predictions only

Length 1,089 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRAP16234 HULC.1-201ENST00000612720 240 ntBASIC2.35□□□□□ -2.03
PDGFRAP16234 AC068792.1-201ENST00000621354 417 ntBASIC2.35□□□□□ -2.03
PDGFRAP16234 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.35□□□□□ -2.03
PDGFRAP16234 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
PDGFRAP16234 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC2.34□□□□□ -2.03
PDGFRAP16234 AL596028.1-201ENST00000326971 197 ntBASIC2.34□□□□□ -2.03
PDGFRAP16234 Y_RNA.409-201ENST00000383990 98 ntBASIC2.34□□□□□ -2.03
PDGFRAP16234 SNORA80E-201ENST00000384744 137 ntBASIC2.34□□□□□ -2.03
PDGFRAP16234 MIR221-201ENST00000385135 110 ntBASIC2.34□□□□□ -2.03
PDGFRAP16234 MIR561-201ENST00000385216 97 ntBASIC2.34□□□□□ -2.03
PDGFRAP16234 MTCO3P40-201ENST00000392516 676 ntBASIC2.34□□□□□ -2.03
PDGFRAP16234 RN7SKP158-201ENST00000410453 326 ntBASIC2.34□□□□□ -2.03
PDGFRAP16234 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC2.34□□□□□ -2.03
PDGFRAP16234 TIMM9P3-201ENST00000428659 274 ntBASIC2.34□□□□□ -2.03
PDGFRAP16234 VN1R108P-201ENST00000431580 830 ntBASIC2.34□□□□□ -2.03
PDGFRAP16234 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC2.34□□□□□ -2.03
PDGFRAP16234 RPL7P54-201ENST00000438336 674 ntBASIC2.34□□□□□ -2.03
PDGFRAP16234 RPL39P29-201ENST00000447779 157 ntBASIC2.34□□□□□ -2.03
PDGFRAP16234 PSPHP1-201ENST00000450062 261 ntBASIC2.34□□□□□ -2.03
PDGFRAP16234 RPL9P6-201ENST00000492764 598 ntBASIC2.34□□□□□ -2.03
PDGFRAP16234 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC2.34□□□□□ -2.03
PDGFRAP16234 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC2.34□□□□□ -2.03
PDGFRAP16234 RNU6-586P-201ENST00000517265 104 ntBASIC2.34□□□□□ -2.03
PDGFRAP16234 AC090115.3-201ENST00000553218 849 ntBASIC2.34□□□□□ -2.03
PDGFRAP16234 VN1R107P-201ENST00000601784 209 ntBASIC2.34□□□□□ -2.03
PDGFRAP16234 AL359880.1-201ENST00000621879 266 ntBASIC2.34□□□□□ -2.03
PDGFRAP16234 ATP8A2P2-201ENST00000437678 1568 ntBASIC2.34□□□□□ -2.03
PDGFRAP16234 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.04
PDGFRAP16234 MTND5P6-201ENST00000422338 1798 ntBASIC2.33□□□□□ -2.04
PDGFRAP16234 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
PDGFRAP16234 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
PDGFRAP16234 RNU6-212P-201ENST00000362642 104 ntBASIC2.33□□□□□ -2.04
PDGFRAP16234 RNU6-1032P-201ENST00000384100 107 ntBASIC2.33□□□□□ -2.04
PDGFRAP16234 RNU6-1222P-201ENST00000384615 107 ntBASIC2.33□□□□□ -2.04
PDGFRAP16234 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
PDGFRAP16234 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
PDGFRAP16234 USP9YP8-201ENST00000441913 500 ntBASIC2.33□□□□□ -2.04
PDGFRAP16234 AC009238.1-201ENST00000442165 424 ntBASIC2.33□□□□□ -2.04
PDGFRAP16234 TRAPPC2P3-201ENST00000443200 321 ntBASIC2.33□□□□□ -2.04
PDGFRAP16234 AC009237.6-201ENST00000446969 424 ntBASIC2.33□□□□□ -2.04
PDGFRAP16234 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC2.33□□□□□ -2.04
PDGFRAP16234 CCDC34P1-201ENST00000507441 517 ntBASIC2.33□□□□□ -2.04
PDGFRAP16234 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC2.33□□□□□ -2.04
PDGFRAP16234 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC2.33□□□□□ -2.04
PDGFRAP16234 CYCSP27-201ENST00000527643 293 ntBASIC2.33□□□□□ -2.04
PDGFRAP16234 AL138976.2-201ENST00000563989 694 ntBASIC2.33□□□□□ -2.04
PDGFRAP16234 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC2.33□□□□□ -2.04
PDGFRAP16234 MIR3945-201ENST00000581853 98 ntBASIC2.33□□□□□ -2.04
PDGFRAP16234 AC103987.3-201ENST00000582071 292 ntBASIC2.33□□□□□ -2.04
PDGFRAP16234 BNIP3P16-201ENST00000589779 534 ntBASIC2.33□□□□□ -2.04
PDGFRAP16234 AC009831.4-201ENST00000620744 325 ntBASIC2.33□□□□□ -2.04
PDGFRAP16234 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
PDGFRAP16234 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.33□□□□□ -2.04
PDGFRAP16234 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.33□□□□□ -2.04
PDGFRAP16234 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
PDGFRAP16234 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC2.32□□□□□ -2.04
PDGFRAP16234 MIRLET7G-201ENST00000362280 84 ntBASIC2.32□□□□□ -2.04
PDGFRAP16234 U8.2-201ENST00000363156 134 ntBASIC2.32□□□□□ -2.04
PDGFRAP16234 RNU6-1085P-201ENST00000363576 107 ntBASIC2.32□□□□□ -2.04
PDGFRAP16234 SNORA69-201ENST00000383895 132 ntBASIC2.32□□□□□ -2.04
PDGFRAP16234 SNORA70B-201ENST00000384210 135 ntBASIC2.32□□□□□ -2.04
PDGFRAP16234 MIR544A-201ENST00000384855 91 ntBASIC2.32□□□□□ -2.04
PDGFRAP16234 RNU6-1245P-201ENST00000411130 106 ntBASIC2.32□□□□□ -2.04
PDGFRAP16234 RNA5SP270-201ENST00000411361 118 ntBASIC2.32□□□□□ -2.04
PDGFRAP16234 AL135786.1-201ENST00000415892 214 ntBASIC2.32□□□□□ -2.04
PDGFRAP16234 AL117339.3-201ENST00000418733 162 ntBASIC2.32□□□□□ -2.04
PDGFRAP16234 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC2.32□□□□□ -2.04
PDGFRAP16234 AC243964.1-201ENST00000441814 261 ntBASIC2.32□□□□□ -2.04
PDGFRAP16234 RPL30P1-201ENST00000488676 339 ntBASIC2.32□□□□□ -2.04
PDGFRAP16234 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.32□□□□□ -2.04
PDGFRAP16234 AC118273.2-201ENST00000532092 465 ntBASIC2.32□□□□□ -2.04
PDGFRAP16234 OR11H5P-201ENST00000554039 926 ntBASIC2.32□□□□□ -2.04
PDGFRAP16234 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC2.32□□□□□ -2.04
PDGFRAP16234 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC2.32□□□□□ -2.04
PDGFRAP16234 AC091135.1-201ENST00000585943 307 ntBASIC2.32□□□□□ -2.04
PDGFRAP16234 AC025165.5-201ENST00000602802 578 ntBASIC2.32□□□□□ -2.04
PDGFRAP16234 AC097372.5-201ENST00000623665 376 ntBASIC2.32□□□□□ -2.04
PDGFRAP16234 RNU6-82P-201ENST00000363970 107 ntBASIC2.31□□□□□ -2.04
PDGFRAP16234 RNU6-336P-201ENST00000364891 107 ntBASIC2.31□□□□□ -2.04
PDGFRAP16234 Y_RNA.436-201ENST00000384097 102 ntBASIC2.31□□□□□ -2.04
PDGFRAP16234 CALM2P3-201ENST00000400429 449 ntBASIC2.31□□□□□ -2.04
PDGFRAP16234 RPS29P13-201ENST00000402041 169 ntBASIC2.31□□□□□ -2.04
PDGFRAP16234 AL591034.2-201ENST00000402839 359 ntBASIC2.31□□□□□ -2.04
PDGFRAP16234 RNU6ATAC37P-201ENST00000408328 131 ntBASIC2.31□□□□□ -2.04
PDGFRAP16234 RNA5SP425-201ENST00000410336 112 ntBASIC2.31□□□□□ -2.04
PDGFRAP16234 RN7SKP223-201ENST00000410582 62 ntBASIC2.31□□□□□ -2.04
PDGFRAP16234 RNU6-293P-201ENST00000411259 106 ntBASIC2.31□□□□□ -2.04
PDGFRAP16234 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC2.31□□□□□ -2.04
PDGFRAP16234 OOSP1P1-201ENST00000423265 274 ntBASIC2.31□□□□□ -2.04
PDGFRAP16234 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC2.31□□□□□ -2.04
PDGFRAP16234 MTND1P1-201ENST00000445453 368 ntBASIC2.31□□□□□ -2.04
PDGFRAP16234 AL353705.4-201ENST00000449661 238 ntBASIC2.31□□□□□ -2.04
PDGFRAP16234 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC2.31□□□□□ -2.04
PDGFRAP16234 MTCO3P38-201ENST00000468910 766 ntBASIC2.31□□□□□ -2.04
PDGFRAP16234 RNU6-835P-201ENST00000516974 104 ntBASIC2.31□□□□□ -2.04
PDGFRAP16234 MIR6873-201ENST00000622788 63 ntBASIC2.31□□□□□ -2.04
PDGFRAP16234 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC2.31□□□□□ -2.04
PDGFRAP16234 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC2.3□□□□□ -2.04
PDGFRAP16234 RNU6-428P-201ENST00000362942 107 ntBASIC2.3□□□□□ -2.04
PDGFRAP16234 RNU4-75P-201ENST00000364621 146 ntBASIC2.3□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 127.5 ms