Protein–RNA interactions for Protein: Q9UQD0

SCN8A, Sodium channel protein type 8 subunit alpha, humanhuman

Predictions only

Length 1,980 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8AQ9UQD0 AC093648.1-201ENST00000623546 606 ntBASIC0.77□□□□□ -2.29
SCN8AQ9UQD0 AC027335.2-201ENST00000624030 375 ntBASIC0.77□□□□□ -2.29
SCN8AQ9UQD0 SCARNA4-202ENST00000625402 129 ntBASIC0.77□□□□□ -2.29
SCN8AQ9UQD0 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC0.77□□□□□ -2.29
SCN8AQ9UQD0 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC0.77□□□□□ -2.29
SCN8AQ9UQD0 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC0.76□□□□□ -2.29
SCN8AQ9UQD0 Y_RNA.99-201ENST00000363138 105 ntBASIC0.76□□□□□ -2.29
SCN8AQ9UQD0 RNU5B-4P-201ENST00000363508 111 ntBASIC0.76□□□□□ -2.29
SCN8AQ9UQD0 RNU6-271P-201ENST00000363858 105 ntBASIC0.76□□□□□ -2.29
SCN8AQ9UQD0 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC0.76□□□□□ -2.29
SCN8AQ9UQD0 RNU4-22P-201ENST00000411058 166 ntBASIC0.76□□□□□ -2.29
SCN8AQ9UQD0 RPL37P10-201ENST00000412884 288 ntBASIC0.76□□□□□ -2.29
SCN8AQ9UQD0 AL591212.2-201ENST00000433923 257 ntBASIC0.76□□□□□ -2.29
SCN8AQ9UQD0 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC0.76□□□□□ -2.29
SCN8AQ9UQD0 UBE2V1P8-201ENST00000437166 265 ntBASIC0.76□□□□□ -2.29
SCN8AQ9UQD0 EEF1E1P1-201ENST00000446998 430 ntBASIC0.76□□□□□ -2.29
SCN8AQ9UQD0 CNOT10-AS1-201ENST00000475395 466 ntTSL 3 BASIC0.76□□□□□ -2.29
SCN8AQ9UQD0 MTND1P3-201ENST00000484956 952 ntBASIC0.76□□□□□ -2.29
SCN8AQ9UQD0 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC0.76□□□□□ -2.29
SCN8AQ9UQD0 AC026616.1-201ENST00000523157 525 ntBASIC0.76□□□□□ -2.29
SCN8AQ9UQD0 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC0.76□□□□□ -2.29
SCN8AQ9UQD0 AC090680.2-201ENST00000550279 742 ntTSL 3 BASIC0.76□□□□□ -2.29
SCN8AQ9UQD0 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC0.76□□□□□ -2.29
SCN8AQ9UQD0 AL132657.2-201ENST00000564417 358 ntBASIC0.76□□□□□ -2.29
SCN8AQ9UQD0 AC005786.1-201ENST00000588553 154 ntBASIC0.76□□□□□ -2.29
SCN8AQ9UQD0 AL365204.3-201ENST00000612448 685 ntBASIC0.76□□□□□ -2.29
SCN8AQ9UQD0 AC112204.3-201ENST00000623822 332 ntBASIC0.76□□□□□ -2.29
SCN8AQ9UQD0 MTND5P33-201ENST00000571250 1450 ntBASIC0.76□□□□□ -2.29
SCN8AQ9UQD0 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC0.76□□□□□ -2.29
SCN8AQ9UQD0 RNU6-1164P-201ENST00000364428 107 ntBASIC0.76□□□□□ -2.29
SCN8AQ9UQD0 RNA5SP390-201ENST00000410191 113 ntBASIC0.76□□□□□ -2.29
SCN8AQ9UQD0 Y_RNA.597-201ENST00000410463 100 ntBASIC0.76□□□□□ -2.29
SCN8AQ9UQD0 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC0.76□□□□□ -2.29
SCN8AQ9UQD0 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC0.76□□□□□ -2.29
SCN8AQ9UQD0 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC0.76□□□□□ -2.29
SCN8AQ9UQD0 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC0.76□□□□□ -2.29
SCN8AQ9UQD0 AC003071.1-201ENST00000451219 789 ntBASIC0.76□□□□□ -2.29
SCN8AQ9UQD0 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC0.76□□□□□ -2.29
SCN8AQ9UQD0 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC0.76□□□□□ -2.29
SCN8AQ9UQD0 AC022022.2-201ENST00000602989 360 ntBASIC0.76□□□□□ -2.29
SCN8AQ9UQD0 AL355472.4-201ENST00000610233 626 ntBASIC0.76□□□□□ -2.29
SCN8AQ9UQD0 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC0.76□□□□□ -2.29
SCN8AQ9UQD0 5S_rRNA.11-201ENST00000618635 84 ntBASIC0.76□□□□□ -2.29
SCN8AQ9UQD0 AL163152.1-201ENST00000642001 374 ntBASIC0.76□□□□□ -2.29
SCN8AQ9UQD0 RNU6-655P-201ENST00000362858 107 ntBASIC0.75□□□□□ -2.29
SCN8AQ9UQD0 Y_RNA.332-201ENST00000365271 113 ntBASIC0.75□□□□□ -2.29
SCN8AQ9UQD0 RNU6-716P-201ENST00000365621 103 ntBASIC0.75□□□□□ -2.29
SCN8AQ9UQD0 RNU6-733P-201ENST00000410759 104 ntBASIC0.75□□□□□ -2.29
SCN8AQ9UQD0 RNU2-62P-201ENST00000410868 191 ntBASIC0.75□□□□□ -2.29
SCN8AQ9UQD0 UBE2V1P10-201ENST00000414685 269 ntBASIC0.75□□□□□ -2.29
SCN8AQ9UQD0 MTND4P25-201ENST00000441039 533 ntBASIC0.75□□□□□ -2.29
SCN8AQ9UQD0 DUXAP8-207ENST00000456786 622 ntBASIC0.75□□□□□ -2.29
SCN8AQ9UQD0 HMGB1P30-201ENST00000492455 606 ntBASIC0.75□□□□□ -2.29
SCN8AQ9UQD0 MIR449C-201ENST00000516047 92 ntBASIC0.75□□□□□ -2.29
SCN8AQ9UQD0 RNU6-334P-201ENST00000517072 102 ntBASIC0.75□□□□□ -2.29
SCN8AQ9UQD0 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC0.75□□□□□ -2.29
SCN8AQ9UQD0 MIR1273C-201ENST00000578669 77 ntBASIC0.75□□□□□ -2.29
SCN8AQ9UQD0 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC0.75□□□□□ -2.29
SCN8AQ9UQD0 MIR330-201ENST00000362196 94 ntBASIC0.74□□□□□ -2.29
SCN8AQ9UQD0 RNU6-853P-201ENST00000364306 107 ntBASIC0.74□□□□□ -2.29
SCN8AQ9UQD0 MIR186-201ENST00000384988 86 ntBASIC0.74□□□□□ -2.29
SCN8AQ9UQD0 MIR320C1-201ENST00000408566 88 ntBASIC0.74□□□□□ -2.29
SCN8AQ9UQD0 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC0.74□□□□□ -2.29
SCN8AQ9UQD0 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC0.74□□□□□ -2.29
SCN8AQ9UQD0 MTCO1P27-201ENST00000448269 226 ntBASIC0.74□□□□□ -2.29
SCN8AQ9UQD0 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC0.74□□□□□ -2.29
SCN8AQ9UQD0 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC0.74□□□□□ -2.29
SCN8AQ9UQD0 RNU5F-2P-201ENST00000516066 82 ntBASIC0.74□□□□□ -2.29
SCN8AQ9UQD0 RNU6-351P-201ENST00000516097 100 ntBASIC0.74□□□□□ -2.29
SCN8AQ9UQD0 AC087854.1-201ENST00000519706 414 ntBASIC0.74□□□□□ -2.29
SCN8AQ9UQD0 AC025524.2-211ENST00000519990 1173 ntTSL 1 (best) BASIC0.74□□□□□ -2.29
SCN8AQ9UQD0 MTATP6P2-201ENST00000603319 678 ntBASIC0.74□□□□□ -2.29
SCN8AQ9UQD0 AC090186.1-201ENST00000605991 572 ntBASIC0.74□□□□□ -2.29
SCN8AQ9UQD0 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC0.74□□□□□ -2.29
SCN8AQ9UQD0 PLD1-217ENST00000627725 174 ntTSL 5 BASIC0.74□□□□□ -2.29
SCN8AQ9UQD0 AC006927.2-201ENST00000639256 389 ntBASIC0.74□□□□□ -2.29
SCN8AQ9UQD0 SNORA22-201ENST00000383907 134 ntBASIC0.74□□□□□ -2.29
SCN8AQ9UQD0 SNORA22C-201ENST00000384614 134 ntBASIC0.74□□□□□ -2.29
SCN8AQ9UQD0 MTND5P15-201ENST00000434246 349 ntBASIC0.74□□□□□ -2.29
SCN8AQ9UQD0 JTBP1-201ENST00000441314 247 ntBASIC0.74□□□□□ -2.29
SCN8AQ9UQD0 AC092625.1-201ENST00000442706 393 ntTSL 3 BASIC0.74□□□□□ -2.29
SCN8AQ9UQD0 NEFMP1-201ENST00000443423 1006 ntBASIC0.74□□□□□ -2.29
SCN8AQ9UQD0 AC079917.1-202ENST00000534059 625 ntTSL 3 BASIC0.74□□□□□ -2.29
SCN8AQ9UQD0 AC023158.2-201ENST00000614876 543 ntBASIC0.74□□□□□ -2.29
SCN8AQ9UQD0 RNU6-1025P-201ENST00000410629 104 ntBASIC0.73□□□□□ -2.29
SCN8AQ9UQD0 MTCO1P17-201ENST00000411522 491 ntBASIC0.73□□□□□ -2.29
SCN8AQ9UQD0 EIF1P1-201ENST00000421436 341 ntBASIC0.73□□□□□ -2.29
SCN8AQ9UQD0 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC0.73□□□□□ -2.29
SCN8AQ9UQD0 CBX3P6-201ENST00000430257 527 ntBASIC0.73□□□□□ -2.29
SCN8AQ9UQD0 AC069257.2-201ENST00000441819 155 ntBASIC0.73□□□□□ -2.29
SCN8AQ9UQD0 MTND1P16-201ENST00000465177 898 ntBASIC0.73□□□□□ -2.29
SCN8AQ9UQD0 RPL39P36-201ENST00000490784 156 ntBASIC0.73□□□□□ -2.29
SCN8AQ9UQD0 AC104806.1-201ENST00000508720 308 ntBASIC0.73□□□□□ -2.29
SCN8AQ9UQD0 BNIP3P31-201ENST00000604515 566 ntBASIC0.73□□□□□ -2.29
SCN8AQ9UQD0 AC006270.3-201ENST00000605967 1036 ntBASIC0.73□□□□□ -2.29
SCN8AQ9UQD0 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC0.73□□□□□ -2.29
SCN8AQ9UQD0 AC100821.1-201ENST00000523153 2479 ntBASIC0.73□□□□□ -2.29
SCN8AQ9UQD0 ANKRD36BP1-202ENST00000604892 1417 ntBASIC0.73□□□□□ -2.29
SCN8AQ9UQD0 RNU6-1105P-201ENST00000384774 107 ntBASIC0.72□□□□□ -2.29
SCN8AQ9UQD0 MIR618-201ENST00000385287 98 ntBASIC0.72□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 160.8 ms