Protein–RNA interactions for Protein: Q9P0U4

CXXC1, CXXC-type zinc finger protein 1, humanhuman

Predicted RBP Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1Q9P0U4 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
CXXC1Q9P0U4 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC4.42□□□□□ -1.7
CXXC1Q9P0U4 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC4.42□□□□□ -1.7
CXXC1Q9P0U4 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
CXXC1Q9P0U4 AL133383.2-201ENST00000622958 2336 ntBASIC4.41□□□□□ -1.7
CXXC1Q9P0U4 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
CXXC1Q9P0U4 AC002546.1-201ENST00000588041 2504 ntBASIC4.41□□□□□ -1.7
CXXC1Q9P0U4 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
CXXC1Q9P0U4 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC4.41□□□□□ -1.7
CXXC1Q9P0U4 Y_RNA.275-201ENST00000364726 110 ntBASIC4.41□□□□□ -1.7
CXXC1Q9P0U4 RNU6-245P-201ENST00000384020 107 ntBASIC4.41□□□□□ -1.7
CXXC1Q9P0U4 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
CXXC1Q9P0U4 MIR921-201ENST00000401133 56 ntBASIC4.41□□□□□ -1.7
CXXC1Q9P0U4 CYCSP48-201ENST00000417124 323 ntBASIC4.41□□□□□ -1.7
CXXC1Q9P0U4 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC4.41□□□□□ -1.7
CXXC1Q9P0U4 AIG1P1-201ENST00000503376 148 ntBASIC4.41□□□□□ -1.7
CXXC1Q9P0U4 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC4.41□□□□□ -1.7
CXXC1Q9P0U4 RN7SKP83-201ENST00000516512 178 ntBASIC4.41□□□□□ -1.7
CXXC1Q9P0U4 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC4.41□□□□□ -1.7
CXXC1Q9P0U4 AP000867.2-201ENST00000532468 320 ntBASIC4.41□□□□□ -1.7
CXXC1Q9P0U4 AC233702.2-202ENST00000562547 291 ntBASIC4.41□□□□□ -1.7
CXXC1Q9P0U4 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC4.41□□□□□ -1.7
CXXC1Q9P0U4 AC087499.8-201ENST00000578406 226 ntBASIC4.41□□□□□ -1.7
CXXC1Q9P0U4 MIR5684-201ENST00000585074 65 ntBASIC4.41□□□□□ -1.7
CXXC1Q9P0U4 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC4.41□□□□□ -1.7
CXXC1Q9P0U4 RNU6-91P-201ENST00000607774 107 ntBASIC4.41□□□□□ -1.7
CXXC1Q9P0U4 HOTTIP_4.1-201ENST00000618195 165 ntBASIC4.41□□□□□ -1.7
CXXC1Q9P0U4 MIR7975-201ENST00000619350 68 ntBASIC4.41□□□□□ -1.7
CXXC1Q9P0U4 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
CXXC1Q9P0U4 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC4.41□□□□□ -1.7
CXXC1Q9P0U4 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
CXXC1Q9P0U4 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
CXXC1Q9P0U4 MTND5P35-201ENST00000557537 1720 ntBASIC4.41□□□□□ -1.7
CXXC1Q9P0U4 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
CXXC1Q9P0U4 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC4.4□□□□□ -1.7
CXXC1Q9P0U4 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC4.4□□□□□ -1.7
CXXC1Q9P0U4 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
CXXC1Q9P0U4 RNVU1-14-201ENST00000384770 164 ntBASIC4.4□□□□□ -1.71
CXXC1Q9P0U4 MIR208B-201ENST00000401172 77 ntBASIC4.4□□□□□ -1.71
CXXC1Q9P0U4 RNU2-61P-201ENST00000411069 191 ntBASIC4.4□□□□□ -1.71
CXXC1Q9P0U4 Y_RNA.626-201ENST00000411288 95 ntBASIC4.4□□□□□ -1.71
CXXC1Q9P0U4 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC4.4□□□□□ -1.71
CXXC1Q9P0U4 AC005042.3-201ENST00000453230 174 ntBASIC4.4□□□□□ -1.71
CXXC1Q9P0U4 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC4.4□□□□□ -1.71
CXXC1Q9P0U4 RNU7-120P-201ENST00000459334 63 ntBASIC4.4□□□□□ -1.71
CXXC1Q9P0U4 RNU6-625P-201ENST00000459412 107 ntBASIC4.4□□□□□ -1.71
CXXC1Q9P0U4 AC007215.1-201ENST00000464893 276 ntBASIC4.4□□□□□ -1.71
CXXC1Q9P0U4 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC4.4□□□□□ -1.71
CXXC1Q9P0U4 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC4.4□□□□□ -1.71
CXXC1Q9P0U4 AC091152.3-201ENST00000604227 325 ntBASIC4.4□□□□□ -1.71
CXXC1Q9P0U4 U3.45-201ENST00000607547 219 ntBASIC4.4□□□□□ -1.71
CXXC1Q9P0U4 AL138880.2-201ENST00000616214 239 ntBASIC4.4□□□□□ -1.71
CXXC1Q9P0U4 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC4.4□□□□□ -1.71
CXXC1Q9P0U4 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC4.4□□□□□ -1.71
CXXC1Q9P0U4 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
CXXC1Q9P0U4 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC4.4□□□□□ -1.71
CXXC1Q9P0U4 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC4.4□□□□□ -1.71
CXXC1Q9P0U4 BX322639.1-202ENST00000423987 2213 ntBASIC4.4□□□□□ -1.71
CXXC1Q9P0U4 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC4.39□□□□□ -1.71
CXXC1Q9P0U4 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
CXXC1Q9P0U4 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
CXXC1Q9P0U4 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC4.39□□□□□ -1.71
CXXC1Q9P0U4 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC4.39□□□□□ -1.71
CXXC1Q9P0U4 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
CXXC1Q9P0U4 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
CXXC1Q9P0U4 Y_RNA.292-201ENST00000364904 97 ntBASIC4.39□□□□□ -1.71
CXXC1Q9P0U4 RNU6-793P-201ENST00000384233 104 ntBASIC4.39□□□□□ -1.71
CXXC1Q9P0U4 RNU6-198P-201ENST00000384258 104 ntBASIC4.39□□□□□ -1.71
CXXC1Q9P0U4 HIST1H2APS3-201ENST00000403259 134 ntBASIC4.39□□□□□ -1.71
CXXC1Q9P0U4 RPS29P4-201ENST00000414733 161 ntBASIC4.39□□□□□ -1.71
CXXC1Q9P0U4 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC4.39□□□□□ -1.71
CXXC1Q9P0U4 RNU7-23P-201ENST00000459465 62 ntBASIC4.39□□□□□ -1.71
CXXC1Q9P0U4 AC091959.1-201ENST00000495857 238 ntBASIC4.39□□□□□ -1.71
CXXC1Q9P0U4 RNA5SP309-201ENST00000516670 106 ntBASIC4.39□□□□□ -1.71
CXXC1Q9P0U4 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC4.39□□□□□ -1.71
CXXC1Q9P0U4 RPL21P7-201ENST00000557463 483 ntBASIC4.39□□□□□ -1.71
CXXC1Q9P0U4 MIR3923-201ENST00000579521 83 ntBASIC4.39□□□□□ -1.71
CXXC1Q9P0U4 MIR3922-201ENST00000585192 84 ntBASIC4.39□□□□□ -1.71
CXXC1Q9P0U4 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC4.39□□□□□ -1.71
CXXC1Q9P0U4 AL357075.2-201ENST00000614906 189 ntBASIC4.39□□□□□ -1.71
CXXC1Q9P0U4 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC4.39□□□□□ -1.71
CXXC1Q9P0U4 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC4.39□□□□□ -1.71
CXXC1Q9P0U4 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC4.39□□□□□ -1.71
CXXC1Q9P0U4 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
CXXC1Q9P0U4 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
CXXC1Q9P0U4 AL109809.4-201ENST00000603520 2185 ntBASIC4.38□□□□□ -1.71
CXXC1Q9P0U4 AC135776.4-201ENST00000624300 1904 ntBASIC4.38□□□□□ -1.71
CXXC1Q9P0U4 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
CXXC1Q9P0U4 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC4.38□□□□□ -1.71
CXXC1Q9P0U4 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC4.38□□□□□ -1.71
CXXC1Q9P0U4 RNU6-545P-201ENST00000362681 104 ntBASIC4.38□□□□□ -1.71
CXXC1Q9P0U4 Y_RNA.122-201ENST00000363331 96 ntBASIC4.38□□□□□ -1.71
CXXC1Q9P0U4 Y_RNA.136-201ENST00000363444 102 ntBASIC4.38□□□□□ -1.71
CXXC1Q9P0U4 Y_RNA.383-201ENST00000383855 97 ntBASIC4.38□□□□□ -1.71
CXXC1Q9P0U4 Y_RNA.500-201ENST00000384466 111 ntBASIC4.38□□□□□ -1.71
CXXC1Q9P0U4 MIR147B-201ENST00000390185 80 ntBASIC4.38□□□□□ -1.71
CXXC1Q9P0U4 MIR1179-201ENST00000408703 91 ntBASIC4.38□□□□□ -1.71
CXXC1Q9P0U4 RNU6-1140P-201ENST00000410517 106 ntBASIC4.38□□□□□ -1.71
CXXC1Q9P0U4 AC023141.4-201ENST00000412031 328 ntBASIC4.38□□□□□ -1.71
CXXC1Q9P0U4 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC4.38□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 103.4 ms