Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC3.63□□□□□ -1.83
CDK5RAP1Q96SZ6 MIR5047-201ENST00000579212 100 ntBASIC3.63□□□□□ -1.83
CDK5RAP1Q96SZ6 AL078605.1-201ENST00000603529 500 ntBASIC3.63□□□□□ -1.83
CDK5RAP1Q96SZ6 AC034102.8-201ENST00000615146 484 ntBASIC3.63□□□□□ -1.83
CDK5RAP1Q96SZ6 AL365265.1-201ENST00000621045 234 ntBASIC3.63□□□□□ -1.83
CDK5RAP1Q96SZ6 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.63□□□□□ -1.83
CDK5RAP1Q96SZ6 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.63□□□□□ -1.83
CDK5RAP1Q96SZ6 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC3.62□□□□□ -1.83
CDK5RAP1Q96SZ6 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
CDK5RAP1Q96SZ6 Y_RNA.8-201ENST00000362353 102 ntBASIC3.62□□□□□ -1.83
CDK5RAP1Q96SZ6 RNU4-35P-201ENST00000362588 141 ntBASIC3.62□□□□□ -1.83
CDK5RAP1Q96SZ6 SNORD113-8-201ENST00000363497 74 ntBASIC3.62□□□□□ -1.83
CDK5RAP1Q96SZ6 SNORD46.1-201ENST00000364139 104 ntBASIC3.62□□□□□ -1.83
CDK5RAP1Q96SZ6 RNU1-33P-201ENST00000364249 162 ntBASIC3.62□□□□□ -1.83
CDK5RAP1Q96SZ6 RNU6-512P-201ENST00000364438 103 ntBASIC3.62□□□□□ -1.83
CDK5RAP1Q96SZ6 RNU6-384P-201ENST00000364900 104 ntBASIC3.62□□□□□ -1.83
CDK5RAP1Q96SZ6 RNA5SP235-201ENST00000365411 114 ntBASIC3.62□□□□□ -1.83
CDK5RAP1Q96SZ6 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
CDK5RAP1Q96SZ6 RPL21P75-201ENST00000396599 483 ntBASIC3.62□□□□□ -1.83
CDK5RAP1Q96SZ6 RPL21P28-201ENST00000401418 483 ntBASIC3.62□□□□□ -1.83
CDK5RAP1Q96SZ6 RNU2-43P-201ENST00000410306 190 ntBASIC3.62□□□□□ -1.83
CDK5RAP1Q96SZ6 RNU6-712P-201ENST00000410558 100 ntBASIC3.62□□□□□ -1.83
CDK5RAP1Q96SZ6 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC3.62□□□□□ -1.83
CDK5RAP1Q96SZ6 AC093578.1-201ENST00000415219 368 ntBASIC3.62□□□□□ -1.83
CDK5RAP1Q96SZ6 AL590556.1-201ENST00000423231 483 ntBASIC3.62□□□□□ -1.83
CDK5RAP1Q96SZ6 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC3.62□□□□□ -1.83
CDK5RAP1Q96SZ6 AC079354.2-201ENST00000453523 154 ntBASIC3.62□□□□□ -1.83
CDK5RAP1Q96SZ6 RPL21P39-201ENST00000463605 483 ntBASIC3.62□□□□□ -1.83
CDK5RAP1Q96SZ6 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC3.62□□□□□ -1.83
CDK5RAP1Q96SZ6 RN7SL330P-201ENST00000469709 307 ntBASIC3.62□□□□□ -1.83
CDK5RAP1Q96SZ6 AC132942.1-201ENST00000486753 483 ntBASIC3.62□□□□□ -1.83
CDK5RAP1Q96SZ6 AC093591.1-201ENST00000491435 481 ntBASIC3.62□□□□□ -1.83
CDK5RAP1Q96SZ6 RPL21P16-201ENST00000495531 483 ntBASIC3.62□□□□□ -1.83
CDK5RAP1Q96SZ6 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC3.62□□□□□ -1.83
CDK5RAP1Q96SZ6 RNU6-1095P-201ENST00000516148 108 ntBASIC3.62□□□□□ -1.83
CDK5RAP1Q96SZ6 MIR548AI-201ENST00000579940 88 ntBASIC3.62□□□□□ -1.83
CDK5RAP1Q96SZ6 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC3.62□□□□□ -1.83
CDK5RAP1Q96SZ6 AC098826.3-201ENST00000603823 466 ntBASIC3.62□□□□□ -1.83
CDK5RAP1Q96SZ6 MIR8058-201ENST00000615737 89 ntBASIC3.62□□□□□ -1.83
CDK5RAP1Q96SZ6 U2.14-201ENST00000615943 113 ntBASIC3.62□□□□□ -1.83
CDK5RAP1Q96SZ6 AC091953.5-201ENST00000622919 233 ntBASIC3.62□□□□□ -1.83
CDK5RAP1Q96SZ6 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
CDK5RAP1Q96SZ6 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
CDK5RAP1Q96SZ6 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.62□□□□□ -1.83
CDK5RAP1Q96SZ6 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
CDK5RAP1Q96SZ6 AC068647.1-201ENST00000489539 2265 ntBASIC3.61□□□□□ -1.83
CDK5RAP1Q96SZ6 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
CDK5RAP1Q96SZ6 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
CDK5RAP1Q96SZ6 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC3.61□□□□□ -1.83
CDK5RAP1Q96SZ6 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
CDK5RAP1Q96SZ6 AL136164.4-201ENST00000625013 2135 ntBASIC3.61□□□□□ -1.83
CDK5RAP1Q96SZ6 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
CDK5RAP1Q96SZ6 AL672296.1-201ENST00000427780 2158 ntBASIC3.61□□□□□ -1.83
CDK5RAP1Q96SZ6 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.61□□□□□ -1.83
CDK5RAP1Q96SZ6 AC002546.1-201ENST00000588041 2504 ntBASIC3.61□□□□□ -1.83
CDK5RAP1Q96SZ6 UBE2L2-201ENST00000254302 429 ntBASIC3.61□□□□□ -1.83
CDK5RAP1Q96SZ6 SNORD81.1-201ENST00000363064 77 ntBASIC3.61□□□□□ -1.83
CDK5RAP1Q96SZ6 RNU6-1181P-201ENST00000384191 106 ntBASIC3.61□□□□□ -1.83
CDK5RAP1Q96SZ6 RNU6-804P-201ENST00000384286 107 ntBASIC3.61□□□□□ -1.83
CDK5RAP1Q96SZ6 RNU6-378P-201ENST00000384324 107 ntBASIC3.61□□□□□ -1.83
CDK5RAP1Q96SZ6 MIR591-201ENST00000385290 95 ntBASIC3.61□□□□□ -1.83
CDK5RAP1Q96SZ6 SNORD17-201ENST00000390930 237 ntBASIC3.61□□□□□ -1.83
CDK5RAP1Q96SZ6 RPS29P13-201ENST00000402041 169 ntBASIC3.61□□□□□ -1.83
CDK5RAP1Q96SZ6 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC3.61□□□□□ -1.83
CDK5RAP1Q96SZ6 AL451074.5-201ENST00000415894 435 ntBASIC3.61□□□□□ -1.83
CDK5RAP1Q96SZ6 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC3.61□□□□□ -1.83
CDK5RAP1Q96SZ6 TMEM167AP1-201ENST00000423409 219 ntBASIC3.61□□□□□ -1.83
CDK5RAP1Q96SZ6 AP000907.1-201ENST00000428428 510 ntBASIC3.61□□□□□ -1.83
CDK5RAP1Q96SZ6 AL357552.1-201ENST00000445254 415 ntBASIC3.61□□□□□ -1.83
CDK5RAP1Q96SZ6 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC3.61□□□□□ -1.83
CDK5RAP1Q96SZ6 RPL23AP67-201ENST00000465341 474 ntBASIC3.61□□□□□ -1.83
CDK5RAP1Q96SZ6 AC084357.1-201ENST00000473404 255 ntBASIC3.61□□□□□ -1.83
CDK5RAP1Q96SZ6 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC3.61□□□□□ -1.83
CDK5RAP1Q96SZ6 AP002770.2-201ENST00000543613 532 ntBASIC3.61□□□□□ -1.83
CDK5RAP1Q96SZ6 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.61□□□□□ -1.83
CDK5RAP1Q96SZ6 TRAV37-201ENST00000553906 342 ntBASIC3.61□□□□□ -1.83
CDK5RAP1Q96SZ6 AL442163.3-201ENST00000554110 156 ntBASIC3.61□□□□□ -1.83
CDK5RAP1Q96SZ6 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC3.61□□□□□ -1.83
CDK5RAP1Q96SZ6 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.61□□□□□ -1.83
CDK5RAP1Q96SZ6 B3GNTL1P2-201ENST00000603673 288 ntBASIC3.61□□□□□ -1.83
CDK5RAP1Q96SZ6 AC009318.2-201ENST00000610917 651 ntBASIC3.61□□□□□ -1.83
CDK5RAP1Q96SZ6 AC104465.1-201ENST00000611365 139 ntBASIC3.61□□□□□ -1.83
CDK5RAP1Q96SZ6 AC090617.7-201ENST00000623952 126 ntBASIC3.61□□□□□ -1.83
CDK5RAP1Q96SZ6 LINC02555-201ENST00000563933 1951 ntBASIC3.61□□□□□ -1.83
CDK5RAP1Q96SZ6 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC3.61□□□□□ -1.83
CDK5RAP1Q96SZ6 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.61□□□□□ -1.83
CDK5RAP1Q96SZ6 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
CDK5RAP1Q96SZ6 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC3.6□□□□□ -1.83
CDK5RAP1Q96SZ6 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.6□□□□□ -1.83
CDK5RAP1Q96SZ6 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
CDK5RAP1Q96SZ6 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
CDK5RAP1Q96SZ6 RNU6-1249P-201ENST00000363237 111 ntBASIC3.6□□□□□ -1.83
CDK5RAP1Q96SZ6 Y_RNA.405-201ENST00000383979 100 ntBASIC3.6□□□□□ -1.83
CDK5RAP1Q96SZ6 Y_RNA.451-201ENST00000384200 100 ntBASIC3.6□□□□□ -1.83
CDK5RAP1Q96SZ6 Y_RNA.524-201ENST00000384564 100 ntBASIC3.6□□□□□ -1.83
CDK5RAP1Q96SZ6 Y_RNA.561-201ENST00000384694 100 ntBASIC3.6□□□□□ -1.83
CDK5RAP1Q96SZ6 MIR184-201ENST00000384962 84 ntBASIC3.6□□□□□ -1.83
CDK5RAP1Q96SZ6 Y_RNA.581-201ENST00000391017 97 ntBASIC3.6□□□□□ -1.83
CDK5RAP1Q96SZ6 AL592148.1-201ENST00000413568 445 ntBASIC3.6□□□□□ -1.83
CDK5RAP1Q96SZ6 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC3.6□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 123.8 ms