Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 HMGB1P27-201ENST00000431429 603 ntBASIC4.53□□□□□ -1.68
RXRBP28702 EEF1B2P7-201ENST00000451177 676 ntBASIC4.53□□□□□ -1.68
RXRBP28702 HSPE1P25-201ENST00000455484 251 ntBASIC4.53□□□□□ -1.68
RXRBP28702 RNU1-41P-201ENST00000516161 162 ntBASIC4.53□□□□□ -1.68
RXRBP28702 RNU1-48P-201ENST00000516400 162 ntBASIC4.53□□□□□ -1.68
RXRBP28702 RNU6-1315P-201ENST00000517187 99 ntBASIC4.53□□□□□ -1.68
RXRBP28702 AL590705.4-201ENST00000532209 134 ntBASIC4.53□□□□□ -1.68
RXRBP28702 CYP4A43P-201ENST00000568156 121 ntBASIC4.53□□□□□ -1.68
RXRBP28702 AL162713.1-201ENST00000604480 262 ntBASIC4.53□□□□□ -1.68
RXRBP28702 AC004832.4-201ENST00000608952 331 ntBASIC4.53□□□□□ -1.68
RXRBP28702 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
RXRBP28702 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC4.53□□□□□ -1.68
RXRBP28702 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC4.52□□□□□ -1.69
RXRBP28702 AC007785.2-201ENST00000598627 1916 ntBASIC4.52□□□□□ -1.69
RXRBP28702 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC4.52□□□□□ -1.69
RXRBP28702 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
RXRBP28702 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
RXRBP28702 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
RXRBP28702 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
RXRBP28702 UBE2L2-201ENST00000254302 429 ntBASIC4.52□□□□□ -1.69
RXRBP28702 RNA5SP502-201ENST00000362694 119 ntBASIC4.52□□□□□ -1.69
RXRBP28702 SNORD113-8-201ENST00000363497 74 ntBASIC4.52□□□□□ -1.69
RXRBP28702 RNY4P28-201ENST00000365281 93 ntBASIC4.52□□□□□ -1.69
RXRBP28702 RNU6-827P-201ENST00000365553 106 ntBASIC4.52□□□□□ -1.69
RXRBP28702 RNU6-81P-201ENST00000365608 104 ntBASIC4.52□□□□□ -1.69
RXRBP28702 MIR708-201ENST00000390708 88 ntBASIC4.52□□□□□ -1.69
RXRBP28702 Y_RNA.602-201ENST00000410535 92 ntBASIC4.52□□□□□ -1.69
RXRBP28702 RN7SKP51-201ENST00000410781 304 ntBASIC4.52□□□□□ -1.69
RXRBP28702 AL513477.1-202ENST00000417061 214 ntBASIC4.52□□□□□ -1.69
RXRBP28702 AL117339.3-201ENST00000418733 162 ntBASIC4.52□□□□□ -1.69
RXRBP28702 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC4.52□□□□□ -1.69
RXRBP28702 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC4.52□□□□□ -1.69
RXRBP28702 USP9YP7-201ENST00000436723 430 ntBASIC4.52□□□□□ -1.69
RXRBP28702 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC4.52□□□□□ -1.69
RXRBP28702 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC4.52□□□□□ -1.69
RXRBP28702 USP9YP32-201ENST00000452432 430 ntBASIC4.52□□□□□ -1.69
RXRBP28702 RPS29P27-201ENST00000463711 170 ntBASIC4.52□□□□□ -1.69
RXRBP28702 RNU6-1278P-201ENST00000516130 107 ntBASIC4.52□□□□□ -1.69
RXRBP28702 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC4.52□□□□□ -1.69
RXRBP28702 MIR1273C-201ENST00000578669 77 ntBASIC4.52□□□□□ -1.69
RXRBP28702 AC011921.3-201ENST00000605540 361 ntBASIC4.52□□□□□ -1.69
RXRBP28702 AL353748.2-201ENST00000622148 471 ntBASIC4.52□□□□□ -1.69
RXRBP28702 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
RXRBP28702 AC011266.1-201ENST00000624119 3569 ntBASIC4.52□□□□□ -1.69
RXRBP28702 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
RXRBP28702 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC4.52□□□□□ -1.69
RXRBP28702 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC4.51□□□□□ -1.69
RXRBP28702 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
RXRBP28702 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC4.51□□□□□ -1.69
RXRBP28702 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
RXRBP28702 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC4.51□□□□□ -1.69
RXRBP28702 SNORD50.2-201ENST00000365465 70 ntBASIC4.51□□□□□ -1.69
RXRBP28702 RNU6-937P-201ENST00000384325 106 ntBASIC4.51□□□□□ -1.69
RXRBP28702 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
RXRBP28702 RN7SKP53-201ENST00000411337 315 ntBASIC4.51□□□□□ -1.69
RXRBP28702 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC4.51□□□□□ -1.69
RXRBP28702 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC4.51□□□□□ -1.69
RXRBP28702 RPL7P47-201ENST00000497299 556 ntBASIC4.51□□□□□ -1.69
RXRBP28702 RNU7-200P-201ENST00000516105 62 ntBASIC4.51□□□□□ -1.69
RXRBP28702 RNU6-927P-201ENST00000516199 100 ntBASIC4.51□□□□□ -1.69
RXRBP28702 RNU6-1012P-201ENST00000516606 109 ntBASIC4.51□□□□□ -1.69
RXRBP28702 MTND5P41-201ENST00000517498 206 ntBASIC4.51□□□□□ -1.69
RXRBP28702 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC4.51□□□□□ -1.69
RXRBP28702 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC4.51□□□□□ -1.69
RXRBP28702 ELOCP29-201ENST00000588193 334 ntBASIC4.51□□□□□ -1.69
RXRBP28702 Z83818.1-201ENST00000603584 150 ntBASIC4.51□□□□□ -1.69
RXRBP28702 AC240442.1-201ENST00000616055 283 ntBASIC4.51□□□□□ -1.69
RXRBP28702 AL360181.4-201ENST00000621752 134 ntBASIC4.51□□□□□ -1.69
RXRBP28702 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
RXRBP28702 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
RXRBP28702 FAM35BP-202ENST00000497389 3337 ntBASIC4.51□□□□□ -1.69
RXRBP28702 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
RXRBP28702 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC4.5□□□□□ -1.69
RXRBP28702 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
RXRBP28702 RNU6-1249P-201ENST00000363237 111 ntBASIC4.5□□□□□ -1.69
RXRBP28702 Y_RNA.122-201ENST00000363331 96 ntBASIC4.5□□□□□ -1.69
RXRBP28702 RNU6-740P-201ENST00000364734 105 ntBASIC4.5□□□□□ -1.69
RXRBP28702 Y_RNA.405-201ENST00000383979 100 ntBASIC4.5□□□□□ -1.69
RXRBP28702 Y_RNA.451-201ENST00000384200 100 ntBASIC4.5□□□□□ -1.69
RXRBP28702 Y_RNA.524-201ENST00000384564 100 ntBASIC4.5□□□□□ -1.69
RXRBP28702 Y_RNA.561-201ENST00000384694 100 ntBASIC4.5□□□□□ -1.69
RXRBP28702 RNU6-882P-201ENST00000391025 103 ntBASIC4.5□□□□□ -1.69
RXRBP28702 MTCYBP2-201ENST00000407745 171 ntBASIC4.5□□□□□ -1.69
RXRBP28702 RNU6ATAC15P-201ENST00000408279 121 ntBASIC4.5□□□□□ -1.69
RXRBP28702 RNA5SP247-201ENST00000411181 105 ntBASIC4.5□□□□□ -1.69
RXRBP28702 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC4.5□□□□□ -1.69
RXRBP28702 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC4.5□□□□□ -1.69
RXRBP28702 RN7SL863P-201ENST00000462370 296 ntBASIC4.5□□□□□ -1.69
RXRBP28702 RPS15AP34-201ENST00000487776 387 ntBASIC4.5□□□□□ -1.69
RXRBP28702 RNU6-840P-201ENST00000517275 65 ntBASIC4.5□□□□□ -1.69
RXRBP28702 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC4.5□□□□□ -1.69
RXRBP28702 AL157871.3-201ENST00000557231 293 ntBASIC4.5□□□□□ -1.69
RXRBP28702 H3F3AP1-201ENST00000559984 334 ntBASIC4.5□□□□□ -1.69
RXRBP28702 AC023824.2-201ENST00000566185 400 ntBASIC4.5□□□□□ -1.69
RXRBP28702 AC104581.2-201ENST00000572227 430 ntBASIC4.5□□□□□ -1.69
RXRBP28702 AP000787.2-201ENST00000604432 568 ntBASIC4.5□□□□□ -1.69
RXRBP28702 RNVU1-4-201ENST00000612985 164 ntBASIC4.5□□□□□ -1.69
RXRBP28702 LINC01355-201ENST00000566551 5444 ntBASIC4.5□□□□□ -1.69
RXRBP28702 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC4.5□□□□□ -1.69
RXRBP28702 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC4.5□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 105.7 ms