Protein–RNA interactions for Protein: Q9BYR6

KRTAP3-3, Keratin-associated protein 3-3, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-3Q9BYR6 AC011611.6-201ENST00000547483 255 ntBASIC3.41□□□□□ -1.86
KRTAP3-3Q9BYR6 DIO2-210ENST00000557010 6367 ntAPPRIS P1 TSL 2 BASIC3.41□□□□□ -1.86
KRTAP3-3Q9BYR6 MIR548AO-201ENST00000579992 96 ntBASIC3.41□□□□□ -1.86
KRTAP3-3Q9BYR6 SNORA4-201ENST00000584302 138 ntBASIC3.41□□□□□ -1.86
KRTAP3-3Q9BYR6 AC011921.2-201ENST00000589465 152 ntBASIC3.41□□□□□ -1.86
KRTAP3-3Q9BYR6 AC103810.8-201ENST00000607347 118 ntBASIC3.41□□□□□ -1.86
KRTAP3-3Q9BYR6 BMS1-201ENST00000374518 7753 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
KRTAP3-3Q9BYR6 TNFRSF19-203ENST00000382263 4151 ntAPPRIS ALT2 TSL 1 (best) BASIC3.41□□□□□ -1.86
KRTAP3-3Q9BYR6 IRF6-201ENST00000367021 4306 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
KRTAP3-3Q9BYR6 SLC17A8-201ENST00000323346 3983 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
KRTAP3-3Q9BYR6 FBXW10-203ENST00000395665 3431 ntAPPRIS P3 TSL 1 (best) BASIC3.41□□□□□ -1.86
KRTAP3-3Q9BYR6 SCIN-201ENST00000297029 9713 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
KRTAP3-3Q9BYR6 OR2T12-202ENST00000641276 5708 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
KRTAP3-3Q9BYR6 ZNF850-202ENST00000591344 7714 ntAPPRIS P3 TSL 1 (best) BASIC3.4□□□□□ -1.86
KRTAP3-3Q9BYR6 ITPR1-205ENST00000456211 9717 ntTSL 1 (best) BASIC3.4□□□□□ -1.86
KRTAP3-3Q9BYR6 NUP153-201ENST00000262077 5487 ntAPPRIS P3 TSL 1 (best) BASIC3.4□□□□□ -1.86
KRTAP3-3Q9BYR6 KIF1B-201ENST00000263934 6816 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
KRTAP3-3Q9BYR6 HRH1-201ENST00000397056 4711 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
KRTAP3-3Q9BYR6 LMO7-203ENST00000357063 8237 ntAPPRIS ALT2 TSL 5 BASIC3.4□□□□□ -1.86
KRTAP3-3Q9BYR6 MID1-205ENST00000380785 6092 ntAPPRIS P1 TSL 2 BASIC3.4□□□□□ -1.86
KRTAP3-3Q9BYR6 STON2-206ENST00000555447 4302 ntAPPRIS ALT2 TSL 1 (best) BASIC3.4□□□□□ -1.86
KRTAP3-3Q9BYR6 EZH1-202ENST00000428826 4623 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
KRTAP3-3Q9BYR6 SORBS1-219ENST00000607232 4374 ntAPPRIS ALT2 TSL 5 BASIC3.4□□□□□ -1.86
KRTAP3-3Q9BYR6 USP47-203ENST00000399455 7396 ntAPPRIS ALT2 TSL 5 BASIC3.4□□□□□ -1.87
KRTAP3-3Q9BYR6 CTSL3P-201ENST00000354530 657 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
KRTAP3-3Q9BYR6 MIR519A1-201ENST00000385257 85 ntBASIC3.4□□□□□ -1.87
KRTAP3-3Q9BYR6 RNA5SP297-201ENST00000391029 113 ntBASIC3.4□□□□□ -1.87
KRTAP3-3Q9BYR6 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
KRTAP3-3Q9BYR6 MICF-203ENST00000432679 129 ntBASIC3.4□□□□□ -1.87
KRTAP3-3Q9BYR6 GHRL-210ENST00000449238 440 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
KRTAP3-3Q9BYR6 ZNF761-203ENST00000454407 3967 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.87
KRTAP3-3Q9BYR6 PDE4D-216ENST00000507116 3350 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
KRTAP3-3Q9BYR6 ANKRD55-205ENST00000513241 626 ntTSL 5 BASIC3.4□□□□□ -1.87
KRTAP3-3Q9BYR6 AC087752.2-201ENST00000521219 281 ntBASIC3.4□□□□□ -1.87
KRTAP3-3Q9BYR6 RPL27A-211ENST00000532359 406 ntTSL 2 BASIC3.4□□□□□ -1.87
KRTAP3-3Q9BYR6 AC005546.1-201ENST00000591837 391 ntTSL 3 BASIC3.4□□□□□ -1.87
KRTAP3-3Q9BYR6 RPS28P1-201ENST00000604589 187 ntBASIC3.4□□□□□ -1.87
KRTAP3-3Q9BYR6 LINC01002-204ENST00000631644 473 ntTSL 5 BASIC3.4□□□□□ -1.87
KRTAP3-3Q9BYR6 MCM8-205ENST00000610722 7486 ntAPPRIS P4 TSL 1 (best) BASIC3.4□□□□□ -1.87
KRTAP3-3Q9BYR6 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC3.4□□□□□ -1.87
KRTAP3-3Q9BYR6 SH3D19-203ENST00000409598 5284 ntAPPRIS ALT1 TSL 1 (best) BASIC3.4□□□□□ -1.87
KRTAP3-3Q9BYR6 DLG2-203ENST00000376104 5139 ntAPPRIS P3 TSL 1 (best) BASIC3.4□□□□□ -1.87
KRTAP3-3Q9BYR6 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.4□□□□□ -1.87
KRTAP3-3Q9BYR6 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.4□□□□□ -1.87
KRTAP3-3Q9BYR6 CACNA1C-220ENST00000399655 13433 ntAPPRIS ALT2 TSL 1 (best) BASIC3.4□□□□□ -1.87
KRTAP3-3Q9BYR6 KIF27-204ENST00000413982 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC3.4□□□□□ -1.87
KRTAP3-3Q9BYR6 ZNF397-202ENST00000330501 5251 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
KRTAP3-3Q9BYR6 IL1RAP-201ENST00000072516 4697 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
KRTAP3-3Q9BYR6 ANKRD46-204ENST00000519597 2779 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
KRTAP3-3Q9BYR6 GRIP1-202ENST00000398016 4888 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
KRTAP3-3Q9BYR6 NNT-201ENST00000264663 6483 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
KRTAP3-3Q9BYR6 METTL8-217ENST00000612742 8132 ntAPPRIS P1 TSL 2 BASIC3.39□□□□□ -1.87
KRTAP3-3Q9BYR6 TMTC2-204ENST00000549919 6211 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
KRTAP3-3Q9BYR6 RTN4-203ENST00000357376 4110 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
KRTAP3-3Q9BYR6 LNX2-201ENST00000316334 4627 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
KRTAP3-3Q9BYR6 DTNA-204ENST00000348997 4518 ntAPPRIS P3 TSL 1 (best) BASIC3.39□□□□□ -1.87
KRTAP3-3Q9BYR6 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
KRTAP3-3Q9BYR6 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC3.39□□□□□ -1.87
KRTAP3-3Q9BYR6 FGF1-216ENST00000621536 4062 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
KRTAP3-3Q9BYR6 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
KRTAP3-3Q9BYR6 CTNND1-216ENST00000527467 5071 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
KRTAP3-3Q9BYR6 CTNND1-229ENST00000531014 5053 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
KRTAP3-3Q9BYR6 SYNPO2-206ENST00000610556 3934 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
KRTAP3-3Q9BYR6 CTNND1-233ENST00000532787 5751 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
KRTAP3-3Q9BYR6 KLF7-201ENST00000309446 8362 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
KRTAP3-3Q9BYR6 Y_RNA.224-201ENST00000364308 111 ntBASIC3.39□□□□□ -1.87
KRTAP3-3Q9BYR6 Y_RNA.258-201ENST00000364613 105 ntBASIC3.39□□□□□ -1.87
KRTAP3-3Q9BYR6 ALDH7A1P4-201ENST00000412255 178 ntBASIC3.39□□□□□ -1.87
KRTAP3-3Q9BYR6 AC017083.1-201ENST00000428093 483 ntBASIC3.39□□□□□ -1.87
KRTAP3-3Q9BYR6 RNU7-195P-201ENST00000458793 62 ntBASIC3.39□□□□□ -1.87
KRTAP3-3Q9BYR6 snoU13.2-201ENST00000459201 104 ntBASIC3.39□□□□□ -1.87
KRTAP3-3Q9BYR6 AC083806.1-201ENST00000468934 316 ntBASIC3.39□□□□□ -1.87
KRTAP3-3Q9BYR6 RN7SL239P-201ENST00000490061 300 ntBASIC3.39□□□□□ -1.87
KRTAP3-3Q9BYR6 RN7SL608P-201ENST00000492377 279 ntBASIC3.39□□□□□ -1.87
KRTAP3-3Q9BYR6 SCARNA17.1-201ENST00000516211 143 ntBASIC3.39□□□□□ -1.87
KRTAP3-3Q9BYR6 SCARNA17.2-201ENST00000516334 143 ntBASIC3.39□□□□□ -1.87
KRTAP3-3Q9BYR6 AC067852.5-201ENST00000589299 310 ntBASIC3.39□□□□□ -1.87
KRTAP3-3Q9BYR6 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC3.39□□□□□ -1.87
KRTAP3-3Q9BYR6 AC006262.3-201ENST00000597337 258 ntTSL 3 BASIC3.39□□□□□ -1.87
KRTAP3-3Q9BYR6 AC008385.1-201ENST00000604421 355 ntBASIC3.39□□□□□ -1.87
KRTAP3-3Q9BYR6 SCARNA17.4-201ENST00000614296 143 ntBASIC3.39□□□□□ -1.87
KRTAP3-3Q9BYR6 MIR6834-201ENST00000622807 81 ntBASIC3.39□□□□□ -1.87
KRTAP3-3Q9BYR6 MIR7157-201ENST00000635801 60 ntBASIC3.39□□□□□ -1.87
KRTAP3-3Q9BYR6 RGSL1-201ENST00000294854 3696 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
KRTAP3-3Q9BYR6 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC3.39□□□□□ -1.87
KRTAP3-3Q9BYR6 SCN9A-201ENST00000303354 9786 ntAPPRIS ALT1 TSL 5 BASIC3.39□□□□□ -1.87
KRTAP3-3Q9BYR6 AC034229.2-201ENST00000566945 2508 ntBASIC3.39□□□□□ -1.87
KRTAP3-3Q9BYR6 CNNM2-202ENST00000369878 15857 ntAPPRIS P4 TSL 1 (best) BASIC3.39□□□□□ -1.87
KRTAP3-3Q9BYR6 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC3.39□□□□□ -1.87
KRTAP3-3Q9BYR6 OR56A4-204ENST00000641835 3613 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
KRTAP3-3Q9BYR6 ATP13A5-201ENST00000342358 4027 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
KRTAP3-3Q9BYR6 AL592182.3-201ENST00000642132 3304 ntBASIC3.39□□□□□ -1.87
KRTAP3-3Q9BYR6 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC3.39□□□□□ -1.87
KRTAP3-3Q9BYR6 LNPK-212ENST00000544803 7647 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
KRTAP3-3Q9BYR6 KCNJ15-201ENST00000328656 8399 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
KRTAP3-3Q9BYR6 CLEC2D-203ENST00000290855 5279 ntAPPRIS P3 TSL 1 (best) BASIC3.38□□□□□ -1.87
KRTAP3-3Q9BYR6 MAGT1-204ENST00000610432 4019 ntAPPRIS P2 TSL 1 (best) BASIC3.38□□□□□ -1.87
KRTAP3-3Q9BYR6 FCRL5-202ENST00000368189 4424 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
KRTAP3-3Q9BYR6 C6orf89-204ENST00000480824 6861 ntAPPRIS ALT2 TSL 1 (best) BASIC3.38□□□□□ -1.87
KRTAP3-3Q9BYR6 ATF7IP2-204ENST00000396560 3665 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 116.1 ms