Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 MTND5P9-201ENST00000503854 1755 ntBASIC3.66□□□□□ -1.82
CDK5RAP1Q96SZ6 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
CDK5RAP1Q96SZ6 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.66□□□□□ -1.82
CDK5RAP1Q96SZ6 MFSD8-236ENST00000641509 4050 ntBASIC3.65□□□□□ -1.82
CDK5RAP1Q96SZ6 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC3.65□□□□□ -1.82
CDK5RAP1Q96SZ6 AC007656.2-201ENST00000624902 4547 ntBASIC3.65□□□□□ -1.82
CDK5RAP1Q96SZ6 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.65□□□□□ -1.83
CDK5RAP1Q96SZ6 HSP90AA4P-202ENST00000506915 2228 ntBASIC3.65□□□□□ -1.83
CDK5RAP1Q96SZ6 SNORA63.1-201ENST00000362493 131 ntBASIC3.65□□□□□ -1.83
CDK5RAP1Q96SZ6 SNORD50.1-201ENST00000362987 71 ntBASIC3.65□□□□□ -1.83
CDK5RAP1Q96SZ6 RNU6-937P-201ENST00000384325 106 ntBASIC3.65□□□□□ -1.83
CDK5RAP1Q96SZ6 MRPL35P1-201ENST00000404272 572 ntBASIC3.65□□□□□ -1.83
CDK5RAP1Q96SZ6 AL353621.1-201ENST00000418219 243 ntBASIC3.65□□□□□ -1.83
CDK5RAP1Q96SZ6 TMSB4XP3-201ENST00000445144 114 ntBASIC3.65□□□□□ -1.83
CDK5RAP1Q96SZ6 HIGD1AP2-201ENST00000446367 280 ntBASIC3.65□□□□□ -1.83
CDK5RAP1Q96SZ6 HMGB3P8-201ENST00000449709 577 ntBASIC3.65□□□□□ -1.83
CDK5RAP1Q96SZ6 AL513124.1-201ENST00000450410 614 ntBASIC3.65□□□□□ -1.83
CDK5RAP1Q96SZ6 AC013470.1-201ENST00000453438 462 ntBASIC3.65□□□□□ -1.83
CDK5RAP1Q96SZ6 U3.44-201ENST00000458938 192 ntBASIC3.65□□□□□ -1.83
CDK5RAP1Q96SZ6 RNU6-953P-201ENST00000459154 107 ntBASIC3.65□□□□□ -1.83
CDK5RAP1Q96SZ6 RNU7-120P-201ENST00000459334 63 ntBASIC3.65□□□□□ -1.83
CDK5RAP1Q96SZ6 AC133134.1-201ENST00000466800 359 ntBASIC3.65□□□□□ -1.83
CDK5RAP1Q96SZ6 RPL23AP14-201ENST00000468281 468 ntBASIC3.65□□□□□ -1.83
CDK5RAP1Q96SZ6 RPL31P60-201ENST00000478450 367 ntBASIC3.65□□□□□ -1.83
CDK5RAP1Q96SZ6 RPL32P34-201ENST00000486380 400 ntBASIC3.65□□□□□ -1.83
CDK5RAP1Q96SZ6 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC3.65□□□□□ -1.83
CDK5RAP1Q96SZ6 RNA5SP471-201ENST00000516971 106 ntBASIC3.65□□□□□ -1.83
CDK5RAP1Q96SZ6 SNORA31.22-201ENST00000517204 135 ntBASIC3.65□□□□□ -1.83
CDK5RAP1Q96SZ6 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC3.65□□□□□ -1.83
CDK5RAP1Q96SZ6 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC3.65□□□□□ -1.83
CDK5RAP1Q96SZ6 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC3.65□□□□□ -1.83
CDK5RAP1Q96SZ6 AC023824.2-201ENST00000566185 400 ntBASIC3.65□□□□□ -1.83
CDK5RAP1Q96SZ6 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC3.65□□□□□ -1.83
CDK5RAP1Q96SZ6 MIR5696-201ENST00000578474 85 ntBASIC3.65□□□□□ -1.83
CDK5RAP1Q96SZ6 AC009314.1-201ENST00000603871 304 ntBASIC3.65□□□□□ -1.83
CDK5RAP1Q96SZ6 MIR6130-201ENST00000619419 109 ntBASIC3.65□□□□□ -1.83
CDK5RAP1Q96SZ6 U4.6-201ENST00000621618 127 ntBASIC3.65□□□□□ -1.83
CDK5RAP1Q96SZ6 AC092628.2-201ENST00000622492 339 ntBASIC3.65□□□□□ -1.83
CDK5RAP1Q96SZ6 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC3.65□□□□□ -1.83
CDK5RAP1Q96SZ6 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC3.65□□□□□ -1.83
CDK5RAP1Q96SZ6 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.65□□□□□ -1.83
CDK5RAP1Q96SZ6 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC3.65□□□□□ -1.83
CDK5RAP1Q96SZ6 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC3.65□□□□□ -1.83
CDK5RAP1Q96SZ6 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.65□□□□□ -1.83
CDK5RAP1Q96SZ6 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
CDK5RAP1Q96SZ6 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC3.65□□□□□ -1.83
CDK5RAP1Q96SZ6 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC3.65□□□□□ -1.83
CDK5RAP1Q96SZ6 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.83
CDK5RAP1Q96SZ6 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
CDK5RAP1Q96SZ6 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
CDK5RAP1Q96SZ6 RNU6-858P-201ENST00000362436 107 ntBASIC3.64□□□□□ -1.83
CDK5RAP1Q96SZ6 RNU6-1155P-201ENST00000363554 107 ntBASIC3.64□□□□□ -1.83
CDK5RAP1Q96SZ6 U3.6-201ENST00000363622 211 ntBASIC3.64□□□□□ -1.83
CDK5RAP1Q96SZ6 MIR34B-201ENST00000385076 84 ntBASIC3.64□□□□□ -1.83
CDK5RAP1Q96SZ6 RNU6-817P-201ENST00000391083 104 ntBASIC3.64□□□□□ -1.83
CDK5RAP1Q96SZ6 RNU6-651P-201ENST00000411040 105 ntBASIC3.64□□□□□ -1.83
CDK5RAP1Q96SZ6 AC017079.2-201ENST00000416102 485 ntBASIC3.64□□□□□ -1.83
CDK5RAP1Q96SZ6 ARF4P2-201ENST00000430209 526 ntBASIC3.64□□□□□ -1.83
CDK5RAP1Q96SZ6 HMGN2P16-201ENST00000456802 261 ntBASIC3.64□□□□□ -1.83
CDK5RAP1Q96SZ6 RNU7-87P-201ENST00000459343 62 ntBASIC3.64□□□□□ -1.83
CDK5RAP1Q96SZ6 RNU6-1278P-201ENST00000516130 107 ntBASIC3.64□□□□□ -1.83
CDK5RAP1Q96SZ6 SNORA25.14-201ENST00000516481 132 ntBASIC3.64□□□□□ -1.83
CDK5RAP1Q96SZ6 RNU6-840P-201ENST00000517275 65 ntBASIC3.64□□□□□ -1.83
CDK5RAP1Q96SZ6 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC3.64□□□□□ -1.83
CDK5RAP1Q96SZ6 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC3.64□□□□□ -1.83
CDK5RAP1Q96SZ6 AC093023.1-201ENST00000547375 507 ntBASIC3.64□□□□□ -1.83
CDK5RAP1Q96SZ6 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC3.64□□□□□ -1.83
CDK5RAP1Q96SZ6 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC3.64□□□□□ -1.83
CDK5RAP1Q96SZ6 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC3.64□□□□□ -1.83
CDK5RAP1Q96SZ6 AC004832.4-201ENST00000608952 331 ntBASIC3.64□□□□□ -1.83
CDK5RAP1Q96SZ6 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.64□□□□□ -1.83
CDK5RAP1Q96SZ6 AC069200.1-201ENST00000609511 323 ntBASIC3.64□□□□□ -1.83
CDK5RAP1Q96SZ6 DLEU1_1.1-201ENST00000618107 190 ntBASIC3.64□□□□□ -1.83
CDK5RAP1Q96SZ6 MIR7975-201ENST00000619350 68 ntBASIC3.64□□□□□ -1.83
CDK5RAP1Q96SZ6 AC006504.1-201ENST00000562493 3666 ntBASIC3.64□□□□□ -1.83
CDK5RAP1Q96SZ6 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.64□□□□□ -1.83
CDK5RAP1Q96SZ6 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
CDK5RAP1Q96SZ6 AL356274.2-201ENST00000624379 3752 ntBASIC3.63□□□□□ -1.83
CDK5RAP1Q96SZ6 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
CDK5RAP1Q96SZ6 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC3.63□□□□□ -1.83
CDK5RAP1Q96SZ6 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
CDK5RAP1Q96SZ6 Y_RNA.27-201ENST00000362540 103 ntBASIC3.63□□□□□ -1.83
CDK5RAP1Q96SZ6 RNU6-283P-201ENST00000364788 107 ntBASIC3.63□□□□□ -1.83
CDK5RAP1Q96SZ6 RNU6-827P-201ENST00000365553 106 ntBASIC3.63□□□□□ -1.83
CDK5RAP1Q96SZ6 Y_RNA.439-201ENST00000384119 94 ntBASIC3.63□□□□□ -1.83
CDK5RAP1Q96SZ6 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
CDK5RAP1Q96SZ6 AL079342.1-201ENST00000401460 267 ntBASIC3.63□□□□□ -1.83
CDK5RAP1Q96SZ6 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC3.63□□□□□ -1.83
CDK5RAP1Q96SZ6 DBIP2-201ENST00000419076 262 ntBASIC3.63□□□□□ -1.83
CDK5RAP1Q96SZ6 RPS29P31-201ENST00000446147 164 ntBASIC3.63□□□□□ -1.83
CDK5RAP1Q96SZ6 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC3.63□□□□□ -1.83
CDK5RAP1Q96SZ6 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC3.63□□□□□ -1.83
CDK5RAP1Q96SZ6 RPS29P26-201ENST00000477483 171 ntBASIC3.63□□□□□ -1.83
CDK5RAP1Q96SZ6 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC3.63□□□□□ -1.83
CDK5RAP1Q96SZ6 FCF1P8-201ENST00000510322 597 ntBASIC3.63□□□□□ -1.83
CDK5RAP1Q96SZ6 SNORD116-28-201ENST00000516123 91 ntBASIC3.63□□□□□ -1.83
CDK5RAP1Q96SZ6 SNORA31.6-201ENST00000516241 130 ntBASIC3.63□□□□□ -1.83
CDK5RAP1Q96SZ6 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC3.63□□□□□ -1.83
CDK5RAP1Q96SZ6 AC103996.1-201ENST00000555468 102 ntBASIC3.63□□□□□ -1.83
CDK5RAP1Q96SZ6 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC3.63□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 103.8 ms