Protein–RNA interactions for Protein: Q96JQ5

MS4A4A, Membrane-spanning 4-domains subfamily A member 4A, humanhuman

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A4AQ96JQ5 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC5.4□□□□□ -1.55
MS4A4AQ96JQ5 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC5.39□□□□□ -1.55
MS4A4AQ96JQ5 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
MS4A4AQ96JQ5 AL157938.3-201ENST00000502188 3084 ntTSL 4 BASIC5.39□□□□□ -1.55
MS4A4AQ96JQ5 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC5.39□□□□□ -1.55
MS4A4AQ96JQ5 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC5.39□□□□□ -1.55
MS4A4AQ96JQ5 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
MS4A4AQ96JQ5 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
MS4A4AQ96JQ5 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
MS4A4AQ96JQ5 AC063976.2-201ENST00000425667 3556 ntBASIC5.39□□□□□ -1.55
MS4A4AQ96JQ5 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
MS4A4AQ96JQ5 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC5.39□□□□□ -1.55
MS4A4AQ96JQ5 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
MS4A4AQ96JQ5 ZNF266-207ENST00000592904 4401 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
MS4A4AQ96JQ5 ZNF546-201ENST00000347077 7987 ntAPPRIS P3 TSL 1 (best) BASIC5.39□□□□□ -1.55
MS4A4AQ96JQ5 NOX4-205ENST00000424319 4184 ntTSL 5 BASIC5.39□□□□□ -1.55
MS4A4AQ96JQ5 SNORA27.1-201ENST00000362604 124 ntBASIC5.39□□□□□ -1.55
MS4A4AQ96JQ5 SNORA51.10-201ENST00000384418 136 ntBASIC5.39□□□□□ -1.55
MS4A4AQ96JQ5 MIR450A2-201ENST00000385022 100 ntBASIC5.39□□□□□ -1.55
MS4A4AQ96JQ5 COX6CP6-201ENST00000490840 228 ntBASIC5.39□□□□□ -1.55
MS4A4AQ96JQ5 MRPS36P2-201ENST00000512569 299 ntBASIC5.39□□□□□ -1.55
MS4A4AQ96JQ5 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
MS4A4AQ96JQ5 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC5.39□□□□□ -1.55
MS4A4AQ96JQ5 MIR4662B-201ENST00000579498 81 ntBASIC5.39□□□□□ -1.55
MS4A4AQ96JQ5 MIR492-201ENST00000638676 116 ntBASIC5.39□□□□□ -1.55
MS4A4AQ96JQ5 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
MS4A4AQ96JQ5 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
MS4A4AQ96JQ5 PRRC1-201ENST00000296666 4699 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
MS4A4AQ96JQ5 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC5.39□□□□□ -1.55
MS4A4AQ96JQ5 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
MS4A4AQ96JQ5 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
MS4A4AQ96JQ5 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
MS4A4AQ96JQ5 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
MS4A4AQ96JQ5 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
MS4A4AQ96JQ5 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
MS4A4AQ96JQ5 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC5.38□□□□□ -1.55
MS4A4AQ96JQ5 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC5.38□□□□□ -1.55
MS4A4AQ96JQ5 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC5.38□□□□□ -1.55
MS4A4AQ96JQ5 VCAN-203ENST00000343200 9455 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
MS4A4AQ96JQ5 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
MS4A4AQ96JQ5 ARHGEF12-213ENST00000532993 8753 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
MS4A4AQ96JQ5 Y_RNA.323-201ENST00000365157 109 ntBASIC5.38□□□□□ -1.55
MS4A4AQ96JQ5 RNA5SP366-201ENST00000365454 123 ntBASIC5.38□□□□□ -1.55
MS4A4AQ96JQ5 UBBP2-201ENST00000376781 231 ntBASIC5.38□□□□□ -1.55
MS4A4AQ96JQ5 RNU6-440P-201ENST00000390882 105 ntBASIC5.38□□□□□ -1.55
MS4A4AQ96JQ5 RNA5SP171-201ENST00000391071 115 ntBASIC5.38□□□□□ -1.55
MS4A4AQ96JQ5 RN7SKP16-201ENST00000410180 299 ntBASIC5.38□□□□□ -1.55
MS4A4AQ96JQ5 PHBP16-201ENST00000446318 950 ntBASIC5.38□□□□□ -1.55
MS4A4AQ96JQ5 RN7SL98P-201ENST00000462271 300 ntBASIC5.38□□□□□ -1.55
MS4A4AQ96JQ5 RPL23AP62-201ENST00000463396 453 ntBASIC5.38□□□□□ -1.55
MS4A4AQ96JQ5 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC5.38□□□□□ -1.55
MS4A4AQ96JQ5 RPL39P34-201ENST00000477141 156 ntBASIC5.38□□□□□ -1.55
MS4A4AQ96JQ5 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC5.38□□□□□ -1.55
MS4A4AQ96JQ5 AL365205.2-201ENST00000594586 68 ntBASIC5.38□□□□□ -1.55
MS4A4AQ96JQ5 MIR3653-201ENST00000625572 110 ntBASIC5.38□□□□□ -1.55
MS4A4AQ96JQ5 LINC01277-201ENST00000419957 2398 ntTSL 2 BASIC5.38□□□□□ -1.55
MS4A4AQ96JQ5 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
MS4A4AQ96JQ5 PCGF5-205ENST00000614189 7037 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
MS4A4AQ96JQ5 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC5.38□□□□□ -1.55
MS4A4AQ96JQ5 FAP-203ENST00000443424 2598 ntTSL 2 BASIC5.38□□□□□ -1.55
MS4A4AQ96JQ5 MECOM-202ENST00000433243 3508 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
MS4A4AQ96JQ5 SSH2-201ENST00000269033 9327 ntAPPRIS P3 TSL 1 (best) BASIC5.37□□□□□ -1.55
MS4A4AQ96JQ5 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
MS4A4AQ96JQ5 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC5.37□□□□□ -1.55
MS4A4AQ96JQ5 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC5.37□□□□□ -1.55
MS4A4AQ96JQ5 RNU1-94P-201ENST00000362627 173 ntBASIC5.37□□□□□ -1.55
MS4A4AQ96JQ5 Y_RNA.91-201ENST00000363042 107 ntBASIC5.37□□□□□ -1.55
MS4A4AQ96JQ5 RNU4-13P-201ENST00000364019 141 ntBASIC5.37□□□□□ -1.55
MS4A4AQ96JQ5 AL355796.1-201ENST00000406706 323 ntBASIC5.37□□□□□ -1.55
MS4A4AQ96JQ5 GPS2P1-201ENST00000411761 986 ntBASIC5.37□□□□□ -1.55
MS4A4AQ96JQ5 AL353705.1-201ENST00000433468 480 ntBASIC5.37□□□□□ -1.55
MS4A4AQ96JQ5 SNORD19.2-201ENST00000516978 73 ntBASIC5.37□□□□□ -1.55
MS4A4AQ96JQ5 RNU4ATAC17P-201ENST00000517272 120 ntBASIC5.37□□□□□ -1.55
MS4A4AQ96JQ5 AL450345.1-202ENST00000605741 3881 ntBASIC5.37□□□□□ -1.55
MS4A4AQ96JQ5 ADGRF5-201ENST00000265417 5668 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
MS4A4AQ96JQ5 C3orf67-209ENST00000482387 2617 ntTSL 5 BASIC5.37□□□□□ -1.55
MS4A4AQ96JQ5 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
MS4A4AQ96JQ5 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
MS4A4AQ96JQ5 RNU6-600P-201ENST00000362524 99 ntBASIC5.36□□□□□ -1.55
MS4A4AQ96JQ5 RNU6-529P-201ENST00000363383 104 ntBASIC5.36□□□□□ -1.55
MS4A4AQ96JQ5 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC5.36□□□□□ -1.55
MS4A4AQ96JQ5 BX276092.6-201ENST00000430476 250 ntBASIC5.36□□□□□ -1.55
MS4A4AQ96JQ5 AL445584.1-201ENST00000431451 330 ntBASIC5.36□□□□□ -1.55
MS4A4AQ96JQ5 BX276092.8-201ENST00000455722 250 ntBASIC5.36□□□□□ -1.55
MS4A4AQ96JQ5 AC010469.1-201ENST00000463864 576 ntBASIC5.36□□□□□ -1.55
MS4A4AQ96JQ5 HSPE1P18-201ENST00000517602 280 ntBASIC5.36□□□□□ -1.55
MS4A4AQ96JQ5 IGKV1-22-201ENST00000524313 326 ntBASIC5.36□□□□□ -1.55
MS4A4AQ96JQ5 AC091979.2-201ENST00000607514 214 ntBASIC5.36□□□□□ -1.55
MS4A4AQ96JQ5 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC5.36□□□□□ -1.55
MS4A4AQ96JQ5 APBB2-230ENST00000543538 6992 ntTSL 5 BASIC5.36□□□□□ -1.55
MS4A4AQ96JQ5 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
MS4A4AQ96JQ5 AC068254.2-201ENST00000623938 3577 ntBASIC5.36□□□□□ -1.55
MS4A4AQ96JQ5 PHC3-214ENST00000494943 5030 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
MS4A4AQ96JQ5 AC007656.2-201ENST00000624902 4547 ntBASIC5.35□□□□□ -1.55
MS4A4AQ96JQ5 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
MS4A4AQ96JQ5 FASTKD2-201ENST00000236980 3188 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
MS4A4AQ96JQ5 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
MS4A4AQ96JQ5 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC5.35□□□□□ -1.55
MS4A4AQ96JQ5 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
MS4A4AQ96JQ5 Y_RNA.219-201ENST00000364232 113 ntBASIC5.35□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 127.9 ms