Protein–RNA interactions for Protein: Q9Y5G4

PCDHGA9, Protocadherin gamma-A9, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9Q9Y5G4 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.39□□□□□ -1.87
PCDHGA9Q9Y5G4 AL137849.1-201ENST00000604767 169 ntBASIC3.39□□□□□ -1.87
PCDHGA9Q9Y5G4 AC005000.2-201ENST00000605468 310 ntBASIC3.39□□□□□ -1.87
PCDHGA9Q9Y5G4 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
PCDHGA9Q9Y5G4 UCA1.1-201ENST00000620952 75 ntBASIC3.39□□□□□ -1.87
PCDHGA9Q9Y5G4 AC092608.2-201ENST00000624427 218 ntBASIC3.39□□□□□ -1.87
PCDHGA9Q9Y5G4 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
PCDHGA9Q9Y5G4 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.39□□□□□ -1.87
PCDHGA9Q9Y5G4 ZNF299P-201ENST00000406845 1804 ntBASIC3.39□□□□□ -1.87
PCDHGA9Q9Y5G4 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC3.39□□□□□ -1.87
PCDHGA9Q9Y5G4 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
PCDHGA9Q9Y5G4 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.39□□□□□ -1.87
PCDHGA9Q9Y5G4 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
PCDHGA9Q9Y5G4 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
PCDHGA9Q9Y5G4 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.38□□□□□ -1.87
PCDHGA9Q9Y5G4 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
PCDHGA9Q9Y5G4 MAPK10-362ENST00000641864 4484 ntBASIC3.38□□□□□ -1.87
PCDHGA9Q9Y5G4 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC3.38□□□□□ -1.87
PCDHGA9Q9Y5G4 RNU6-1010P-201ENST00000362757 107 ntBASIC3.38□□□□□ -1.87
PCDHGA9Q9Y5G4 RNU6-692P-201ENST00000384496 107 ntBASIC3.38□□□□□ -1.87
PCDHGA9Q9Y5G4 MIR490-201ENST00000384865 128 ntBASIC3.38□□□□□ -1.87
PCDHGA9Q9Y5G4 AC138623.1-201ENST00000418060 216 ntBASIC3.38□□□□□ -1.87
PCDHGA9Q9Y5G4 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC3.38□□□□□ -1.87
PCDHGA9Q9Y5G4 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC3.38□□□□□ -1.87
PCDHGA9Q9Y5G4 RPS29P31-201ENST00000446147 164 ntBASIC3.38□□□□□ -1.87
PCDHGA9Q9Y5G4 RPL39P29-201ENST00000447779 157 ntBASIC3.38□□□□□ -1.87
PCDHGA9Q9Y5G4 AC016632.1-201ENST00000503994 196 ntBASIC3.38□□□□□ -1.87
PCDHGA9Q9Y5G4 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC3.38□□□□□ -1.87
PCDHGA9Q9Y5G4 SCARNA16.2-201ENST00000516520 172 ntBASIC3.38□□□□□ -1.87
PCDHGA9Q9Y5G4 AC007458.1-201ENST00000542812 373 ntBASIC3.38□□□□□ -1.87
PCDHGA9Q9Y5G4 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC3.38□□□□□ -1.87
PCDHGA9Q9Y5G4 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC3.38□□□□□ -1.87
PCDHGA9Q9Y5G4 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.38□□□□□ -1.87
PCDHGA9Q9Y5G4 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC3.38□□□□□ -1.87
PCDHGA9Q9Y5G4 AC011471.1-201ENST00000585766 187 ntBASIC3.38□□□□□ -1.87
PCDHGA9Q9Y5G4 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC3.38□□□□□ -1.87
PCDHGA9Q9Y5G4 RPS15AP11-201ENST00000594193 385 ntBASIC3.38□□□□□ -1.87
PCDHGA9Q9Y5G4 RPL23AP78-201ENST00000599928 470 ntBASIC3.38□□□□□ -1.87
PCDHGA9Q9Y5G4 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
PCDHGA9Q9Y5G4 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
PCDHGA9Q9Y5G4 AP000560.1-201ENST00000624150 1937 ntBASIC3.38□□□□□ -1.87
PCDHGA9Q9Y5G4 MTND5P30-201ENST00000452896 1731 ntBASIC3.38□□□□□ -1.87
PCDHGA9Q9Y5G4 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.38□□□□□ -1.87
PCDHGA9Q9Y5G4 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
PCDHGA9Q9Y5G4 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC3.38□□□□□ -1.87
PCDHGA9Q9Y5G4 MTND4P27-201ENST00000450813 1354 ntBASIC3.38□□□□□ -1.87
PCDHGA9Q9Y5G4 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC3.37□□□□□ -1.87
PCDHGA9Q9Y5G4 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
PCDHGA9Q9Y5G4 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
PCDHGA9Q9Y5G4 AC092268.1-201ENST00000342691 405 ntBASIC3.37□□□□□ -1.87
PCDHGA9Q9Y5G4 Y_RNA.123-201ENST00000363338 102 ntBASIC3.37□□□□□ -1.87
PCDHGA9Q9Y5G4 U3.6-201ENST00000363622 211 ntBASIC3.37□□□□□ -1.87
PCDHGA9Q9Y5G4 RNU6-1083P-201ENST00000384022 107 ntBASIC3.37□□□□□ -1.87
PCDHGA9Q9Y5G4 RNU6-331P-201ENST00000384724 107 ntBASIC3.37□□□□□ -1.87
PCDHGA9Q9Y5G4 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC3.37□□□□□ -1.87
PCDHGA9Q9Y5G4 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
PCDHGA9Q9Y5G4 MTCYBP2-201ENST00000407745 171 ntBASIC3.37□□□□□ -1.87
PCDHGA9Q9Y5G4 RN7SKP61-201ENST00000410642 295 ntBASIC3.37□□□□□ -1.87
PCDHGA9Q9Y5G4 AL354751.2-201ENST00000415471 210 ntBASIC3.37□□□□□ -1.87
PCDHGA9Q9Y5G4 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC3.37□□□□□ -1.87
PCDHGA9Q9Y5G4 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
PCDHGA9Q9Y5G4 RPL23AP95-201ENST00000426806 265 ntBASIC3.37□□□□□ -1.87
PCDHGA9Q9Y5G4 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC3.37□□□□□ -1.87
PCDHGA9Q9Y5G4 IGKV1OR9-2-201ENST00000431378 277 ntBASIC3.37□□□□□ -1.87
PCDHGA9Q9Y5G4 AL513124.1-201ENST00000450410 614 ntBASIC3.37□□□□□ -1.87
PCDHGA9Q9Y5G4 Y_RNA.631-201ENST00000459607 101 ntBASIC3.37□□□□□ -1.87
PCDHGA9Q9Y5G4 RPL17P19-201ENST00000489069 552 ntBASIC3.37□□□□□ -1.87
PCDHGA9Q9Y5G4 AC104564.1-201ENST00000493028 407 ntBASIC3.37□□□□□ -1.87
PCDHGA9Q9Y5G4 MTND4LP22-201ENST00000508209 276 ntBASIC3.37□□□□□ -1.87
PCDHGA9Q9Y5G4 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC3.37□□□□□ -1.87
PCDHGA9Q9Y5G4 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC3.37□□□□□ -1.87
PCDHGA9Q9Y5G4 RNA5SP384-201ENST00000516615 116 ntBASIC3.37□□□□□ -1.87
PCDHGA9Q9Y5G4 RN7SKP209-201ENST00000516888 304 ntBASIC3.37□□□□□ -1.87
PCDHGA9Q9Y5G4 RN7SKP57-201ENST00000517248 293 ntBASIC3.37□□□□□ -1.87
PCDHGA9Q9Y5G4 AC093331.1-201ENST00000521474 169 ntBASIC3.37□□□□□ -1.87
PCDHGA9Q9Y5G4 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC3.37□□□□□ -1.87
PCDHGA9Q9Y5G4 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC3.37□□□□□ -1.87
PCDHGA9Q9Y5G4 AC009318.2-201ENST00000610917 651 ntBASIC3.37□□□□□ -1.87
PCDHGA9Q9Y5G4 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
PCDHGA9Q9Y5G4 AP003122.5-201ENST00000527668 3766 ntBASIC3.37□□□□□ -1.87
PCDHGA9Q9Y5G4 CEP170P1-201ENST00000502249 4587 ntBASIC3.37□□□□□ -1.87
PCDHGA9Q9Y5G4 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
PCDHGA9Q9Y5G4 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.36□□□□□ -1.87
PCDHGA9Q9Y5G4 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC3.36□□□□□ -1.87
PCDHGA9Q9Y5G4 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
PCDHGA9Q9Y5G4 RNU1-140P-201ENST00000365040 165 ntBASIC3.36□□□□□ -1.87
PCDHGA9Q9Y5G4 Y_RNA.473-201ENST00000384333 102 ntBASIC3.36□□□□□ -1.87
PCDHGA9Q9Y5G4 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
PCDHGA9Q9Y5G4 U3.19-201ENST00000390893 196 ntBASIC3.36□□□□□ -1.87
PCDHGA9Q9Y5G4 AL512633.1-201ENST00000399931 655 ntBASIC3.36□□□□□ -1.87
PCDHGA9Q9Y5G4 SNORA11.2-201ENST00000408318 127 ntBASIC3.36□□□□□ -1.87
PCDHGA9Q9Y5G4 CYCSP48-201ENST00000417124 323 ntBASIC3.36□□□□□ -1.87
PCDHGA9Q9Y5G4 BX276092.3-201ENST00000424182 230 ntBASIC3.36□□□□□ -1.87
PCDHGA9Q9Y5G4 AC009414.1-201ENST00000427200 443 ntBASIC3.36□□□□□ -1.87
PCDHGA9Q9Y5G4 AC099799.1-201ENST00000439809 192 ntBASIC3.36□□□□□ -1.87
PCDHGA9Q9Y5G4 BX510359.1-201ENST00000456973 237 ntBASIC3.36□□□□□ -1.87
PCDHGA9Q9Y5G4 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC3.36□□□□□ -1.87
PCDHGA9Q9Y5G4 RN7SKP210-201ENST00000459176 261 ntBASIC3.36□□□□□ -1.87
PCDHGA9Q9Y5G4 RPS29P2-201ENST00000479278 136 ntBASIC3.36□□□□□ -1.87
PCDHGA9Q9Y5G4 SNRPGP18-201ENST00000553000 214 ntBASIC3.36□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 86.6 ms