Protein–RNA interactions for Protein: Q9HC52

CBX8, Chromobox protein homolog 8, humanhuman

Predictions only

Length 389 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX8Q9HC52 EIF1AXP1-201ENST00000419267 435 ntBASIC4.24□□□□□ -1.73
CBX8Q9HC52 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC4.24□□□□□ -1.73
CBX8Q9HC52 RPL23AP95-201ENST00000426806 265 ntBASIC4.24□□□□□ -1.73
CBX8Q9HC52 VDAC1P3-201ENST00000434069 851 ntBASIC4.24□□□□□ -1.73
CBX8Q9HC52 AC016700.2-201ENST00000446011 156 ntBASIC4.24□□□□□ -1.73
CBX8Q9HC52 DCLRE1CP1-201ENST00000454630 470 ntBASIC4.24□□□□□ -1.73
CBX8Q9HC52 UQCRHP4-201ENST00000471686 272 ntBASIC4.24□□□□□ -1.73
CBX8Q9HC52 RN7SKP272-201ENST00000516988 232 ntBASIC4.24□□□□□ -1.73
CBX8Q9HC52 KLKP1-201ENST00000595979 403 ntBASIC4.24□□□□□ -1.73
CBX8Q9HC52 VN1R85P-201ENST00000601587 426 ntBASIC4.24□□□□□ -1.73
CBX8Q9HC52 AC073657.2-201ENST00000605661 303 ntBASIC4.24□□□□□ -1.73
CBX8Q9HC52 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
CBX8Q9HC52 AL023881.1-201ENST00000621088 301 ntBASIC4.24□□□□□ -1.73
CBX8Q9HC52 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC4.24□□□□□ -1.73
CBX8Q9HC52 ZNF826P-207ENST00000622273 1910 ntBASIC4.24□□□□□ -1.73
CBX8Q9HC52 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC4.24□□□□□ -1.73
CBX8Q9HC52 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
CBX8Q9HC52 TNPO1P3-201ENST00000436471 2662 ntBASIC4.24□□□□□ -1.73
CBX8Q9HC52 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC4.24□□□□□ -1.73
CBX8Q9HC52 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
CBX8Q9HC52 CEP170P1-201ENST00000502249 4587 ntBASIC4.24□□□□□ -1.73
CBX8Q9HC52 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC4.24□□□□□ -1.73
CBX8Q9HC52 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
CBX8Q9HC52 OFD1P6Y-202ENST00000451061 2724 ntBASIC4.23□□□□□ -1.73
CBX8Q9HC52 AC022336.2-201ENST00000568966 2538 ntBASIC4.23□□□□□ -1.73
CBX8Q9HC52 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC4.23□□□□□ -1.73
CBX8Q9HC52 RNU6-600P-201ENST00000362524 99 ntBASIC4.23□□□□□ -1.73
CBX8Q9HC52 SNORA70.4-201ENST00000365509 134 ntBASIC4.23□□□□□ -1.73
CBX8Q9HC52 MIR32-201ENST00000384965 70 ntBASIC4.23□□□□□ -1.73
CBX8Q9HC52 RPL23AP83-201ENST00000434984 473 ntBASIC4.23□□□□□ -1.73
CBX8Q9HC52 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC4.23□□□□□ -1.73
CBX8Q9HC52 HSPE1P25-201ENST00000455484 251 ntBASIC4.23□□□□□ -1.73
CBX8Q9HC52 AC005921.1-201ENST00000510589 286 ntBASIC4.23□□□□□ -1.73
CBX8Q9HC52 SCARNA24.2-201ENST00000516968 130 ntBASIC4.23□□□□□ -1.73
CBX8Q9HC52 AP006245.1-201ENST00000522549 120 ntBASIC4.23□□□□□ -1.73
CBX8Q9HC52 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC4.23□□□□□ -1.73
CBX8Q9HC52 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC4.23□□□□□ -1.73
CBX8Q9HC52 AC110741.2-201ENST00000605278 268 ntBASIC4.23□□□□□ -1.73
CBX8Q9HC52 SNORA43.4-201ENST00000629559 138 ntBASIC4.23□□□□□ -1.73
CBX8Q9HC52 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
CBX8Q9HC52 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
CBX8Q9HC52 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
CBX8Q9HC52 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
CBX8Q9HC52 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC4.23□□□□□ -1.73
CBX8Q9HC52 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC4.23□□□□□ -1.73
CBX8Q9HC52 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
CBX8Q9HC52 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC4.23□□□□□ -1.73
CBX8Q9HC52 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
CBX8Q9HC52 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
CBX8Q9HC52 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
CBX8Q9HC52 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
CBX8Q9HC52 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
CBX8Q9HC52 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
CBX8Q9HC52 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC4.22□□□□□ -1.73
CBX8Q9HC52 Y_RNA.200-201ENST00000364018 102 ntBASIC4.22□□□□□ -1.73
CBX8Q9HC52 RN7SKP280-201ENST00000364196 304 ntBASIC4.22□□□□□ -1.73
CBX8Q9HC52 RNA5SP515-201ENST00000364570 118 ntBASIC4.22□□□□□ -1.73
CBX8Q9HC52 RNA5SP171-201ENST00000391071 115 ntBASIC4.22□□□□□ -1.73
CBX8Q9HC52 MIR548M-201ENST00000408260 86 ntBASIC4.22□□□□□ -1.73
CBX8Q9HC52 AC007969.2-201ENST00000441891 191 ntBASIC4.22□□□□□ -1.73
CBX8Q9HC52 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC4.22□□□□□ -1.73
CBX8Q9HC52 AC087477.1-201ENST00000465747 340 ntBASIC4.22□□□□□ -1.73
CBX8Q9HC52 AP000870.1-201ENST00000472927 406 ntBASIC4.22□□□□□ -1.73
CBX8Q9HC52 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC4.22□□□□□ -1.73
CBX8Q9HC52 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC4.22□□□□□ -1.73
CBX8Q9HC52 SERF1AP1-201ENST00000514575 187 ntBASIC4.22□□□□□ -1.73
CBX8Q9HC52 MIR3138-201ENST00000585238 82 ntBASIC4.22□□□□□ -1.73
CBX8Q9HC52 AC020895.1-201ENST00000595362 272 ntBASIC4.22□□□□□ -1.73
CBX8Q9HC52 ARF4P1-201ENST00000605447 541 ntBASIC4.22□□□□□ -1.73
CBX8Q9HC52 RNVU1-4-201ENST00000612985 164 ntBASIC4.22□□□□□ -1.73
CBX8Q9HC52 U2.14-201ENST00000615943 113 ntBASIC4.22□□□□□ -1.73
CBX8Q9HC52 AC127459.3-201ENST00000624328 466 ntBASIC4.22□□□□□ -1.73
CBX8Q9HC52 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
CBX8Q9HC52 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
CBX8Q9HC52 RNU5B-2P-201ENST00000363036 113 ntBASIC4.21□□□□□ -1.74
CBX8Q9HC52 Y_RNA.150-201ENST00000363562 102 ntBASIC4.21□□□□□ -1.74
CBX8Q9HC52 RNU6-290P-201ENST00000365212 101 ntBASIC4.21□□□□□ -1.74
CBX8Q9HC52 RNU1-100P-201ENST00000365255 165 ntBASIC4.21□□□□□ -1.74
CBX8Q9HC52 SNORA29-201ENST00000384183 140 ntBASIC4.21□□□□□ -1.74
CBX8Q9HC52 MIR184-201ENST00000384962 84 ntBASIC4.21□□□□□ -1.74
CBX8Q9HC52 MIR153-2-201ENST00000385225 87 ntBASIC4.21□□□□□ -1.74
CBX8Q9HC52 PPIAP31-201ENST00000405422 495 ntBASIC4.21□□□□□ -1.74
CBX8Q9HC52 HMGN2P30-201ENST00000423237 256 ntBASIC4.21□□□□□ -1.74
CBX8Q9HC52 RPS15AP7-201ENST00000439294 405 ntBASIC4.21□□□□□ -1.74
CBX8Q9HC52 SSXP4-201ENST00000451349 245 ntBASIC4.21□□□□□ -1.74
CBX8Q9HC52 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC4.21□□□□□ -1.74
CBX8Q9HC52 PPIAP15-201ENST00000479662 484 ntBASIC4.21□□□□□ -1.74
CBX8Q9HC52 AC105137.1-201ENST00000484355 562 ntBASIC4.21□□□□□ -1.74
CBX8Q9HC52 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC4.21□□□□□ -1.74
CBX8Q9HC52 RNU6-1114P-201ENST00000516022 107 ntBASIC4.21□□□□□ -1.74
CBX8Q9HC52 RNU6-406P-201ENST00000516470 107 ntBASIC4.21□□□□□ -1.74
CBX8Q9HC52 MDM2-232ENST00000544561 213 ntTSL 5 BASIC4.21□□□□□ -1.74
CBX8Q9HC52 CR383656.8-201ENST00000549046 145 ntBASIC4.21□□□□□ -1.74
CBX8Q9HC52 AC007224.1-201ENST00000564410 144 ntBASIC4.21□□□□□ -1.74
CBX8Q9HC52 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC4.21□□□□□ -1.74
CBX8Q9HC52 SNORA62.6-201ENST00000606322 83 ntBASIC4.21□□□□□ -1.74
CBX8Q9HC52 AL353743.1-202ENST00000431724 1695 ntBASIC4.21□□□□□ -1.74
CBX8Q9HC52 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
CBX8Q9HC52 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
CBX8Q9HC52 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 111.7 ms