Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC1.82□□□□□ -2.12
CDH4P55283 RNU6-546P-201ENST00000383991 107 ntBASIC1.82□□□□□ -2.12
CDH4P55283 RNU5A-2P-201ENST00000384337 116 ntBASIC1.82□□□□□ -2.12
CDH4P55283 MIR558-201ENST00000384920 94 ntBASIC1.82□□□□□ -2.12
CDH4P55283 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC1.82□□□□□ -2.12
CDH4P55283 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC1.82□□□□□ -2.12
CDH4P55283 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC1.82□□□□□ -2.12
CDH4P55283 MED13P1-201ENST00000428342 171 ntBASIC1.82□□□□□ -2.12
CDH4P55283 MTND5P25-201ENST00000430499 799 ntBASIC1.82□□□□□ -2.12
CDH4P55283 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC1.82□□□□□ -2.12
CDH4P55283 UBE2D3P4-201ENST00000441973 436 ntBASIC1.82□□□□□ -2.12
CDH4P55283 AL133217.1-201ENST00000450980 425 ntBASIC1.82□□□□□ -2.12
CDH4P55283 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC1.82□□□□□ -2.12
CDH4P55283 ART2BP-201ENST00000453501 499 ntBASIC1.82□□□□□ -2.12
CDH4P55283 snoU13.23-201ENST00000458863 104 ntBASIC1.82□□□□□ -2.12
CDH4P55283 RAP1BP2-201ENST00000478270 544 ntBASIC1.82□□□□□ -2.12
CDH4P55283 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC1.82□□□□□ -2.12
CDH4P55283 RN7SL274P-201ENST00000492268 272 ntBASIC1.82□□□□□ -2.12
CDH4P55283 FABP5P5-201ENST00000515537 406 ntBASIC1.82□□□□□ -2.12
CDH4P55283 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC1.82□□□□□ -2.12
CDH4P55283 OR5AL2P-201ENST00000532185 920 ntBASIC1.82□□□□□ -2.12
CDH4P55283 DEFB122-202ENST00000569013 197 ntBASIC1.82□□□□□ -2.12
CDH4P55283 MIR4419B-201ENST00000577260 68 ntBASIC1.82□□□□□ -2.12
CDH4P55283 AC090897.2-201ENST00000581715 130 ntBASIC1.82□□□□□ -2.12
CDH4P55283 MIR548AB-201ENST00000584917 84 ntBASIC1.82□□□□□ -2.12
CDH4P55283 CLIC4P2-201ENST00000601934 717 ntBASIC1.82□□□□□ -2.12
CDH4P55283 AL109918.3-201ENST00000603072 338 ntBASIC1.82□□□□□ -2.12
CDH4P55283 AC012360.2-201ENST00000609349 391 ntBASIC1.82□□□□□ -2.12
CDH4P55283 Z82243.1-201ENST00000609432 473 ntBASIC1.82□□□□□ -2.12
CDH4P55283 AC091304.9-201ENST00000612091 226 ntBASIC1.82□□□□□ -2.12
CDH4P55283 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC1.82□□□□□ -2.12
CDH4P55283 MTND4P4-201ENST00000439033 1366 ntBASIC1.82□□□□□ -2.12
CDH4P55283 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC1.82□□□□□ -2.12
CDH4P55283 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC1.81□□□□□ -2.12
CDH4P55283 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC1.81□□□□□ -2.12
CDH4P55283 Y_RNA.40-201ENST00000362645 93 ntBASIC1.81□□□□□ -2.12
CDH4P55283 RNU6-1210P-201ENST00000363775 107 ntBASIC1.81□□□□□ -2.12
CDH4P55283 RNU6-384P-201ENST00000364900 104 ntBASIC1.81□□□□□ -2.12
CDH4P55283 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.81□□□□□ -2.12
CDH4P55283 RNU2-23P-201ENST00000410545 195 ntBASIC1.81□□□□□ -2.12
CDH4P55283 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
CDH4P55283 AL031779.1-201ENST00000415663 330 ntBASIC1.81□□□□□ -2.12
CDH4P55283 AC074117.2-201ENST00000417130 397 ntBASIC1.81□□□□□ -2.12
CDH4P55283 C1DP2-201ENST00000418167 426 ntBASIC1.81□□□□□ -2.12
CDH4P55283 AL158823.1-201ENST00000418441 478 ntBASIC1.81□□□□□ -2.12
CDH4P55283 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.81□□□□□ -2.12
CDH4P55283 CYCSP49-201ENST00000420810 319 ntBASIC1.81□□□□□ -2.12
CDH4P55283 RPL31P63-201ENST00000422565 375 ntBASIC1.81□□□□□ -2.12
CDH4P55283 AL365203.2-201ENST00000423444 196 ntBASIC1.81□□□□□ -2.12
CDH4P55283 MTCO3P5-201ENST00000433620 714 ntBASIC1.81□□□□□ -2.12
CDH4P55283 HMGB1P31-201ENST00000437242 427 ntBASIC1.81□□□□□ -2.12
CDH4P55283 AL445567.1-201ENST00000439121 144 ntBASIC1.81□□□□□ -2.12
CDH4P55283 AC104058.1-201ENST00000448028 297 ntBASIC1.81□□□□□ -2.12
CDH4P55283 Y_RNA.672-201ENST00000516289 104 ntBASIC1.81□□□□□ -2.12
CDH4P55283 SNORA43.2-201ENST00000516652 128 ntBASIC1.81□□□□□ -2.12
CDH4P55283 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC1.81□□□□□ -2.12
CDH4P55283 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC1.81□□□□□ -2.12
CDH4P55283 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC1.81□□□□□ -2.12
CDH4P55283 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC1.81□□□□□ -2.12
CDH4P55283 RPL21P5-201ENST00000554662 472 ntBASIC1.81□□□□□ -2.12
CDH4P55283 MIR3915-201ENST00000578518 97 ntBASIC1.81□□□□□ -2.12
CDH4P55283 MIR3124-201ENST00000582636 67 ntBASIC1.81□□□□□ -2.12
CDH4P55283 AC009977.1-201ENST00000586015 570 ntBASIC1.81□□□□□ -2.12
CDH4P55283 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC1.81□□□□□ -2.12
CDH4P55283 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC1.81□□□□□ -2.12
CDH4P55283 AF246928.1-201ENST00000623768 87 ntBASIC1.81□□□□□ -2.12
CDH4P55283 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC1.81□□□□□ -2.12
CDH4P55283 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
CDH4P55283 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC1.81□□□□□ -2.12
CDH4P55283 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.81□□□□□ -2.12
CDH4P55283 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.8□□□□□ -2.12
CDH4P55283 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
CDH4P55283 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC1.8□□□□□ -2.12
CDH4P55283 SNORD56.1-201ENST00000362913 68 ntBASIC1.8□□□□□ -2.12
CDH4P55283 RNY1P12-201ENST00000364251 105 ntBASIC1.8□□□□□ -2.12
CDH4P55283 MIR764-201ENST00000390811 85 ntBASIC1.8□□□□□ -2.12
CDH4P55283 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC1.8□□□□□ -2.12
CDH4P55283 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC1.8□□□□□ -2.12
CDH4P55283 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC1.8□□□□□ -2.12
CDH4P55283 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC1.8□□□□□ -2.12
CDH4P55283 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC1.8□□□□□ -2.12
CDH4P55283 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC1.8□□□□□ -2.12
CDH4P55283 RNU6-250P-201ENST00000516958 103 ntBASIC1.8□□□□□ -2.12
CDH4P55283 RNU2-46P-201ENST00000517038 113 ntBASIC1.8□□□□□ -2.12
CDH4P55283 RNU6-548P-201ENST00000517083 115 ntBASIC1.8□□□□□ -2.12
CDH4P55283 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC1.8□□□□□ -2.12
CDH4P55283 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC1.8□□□□□ -2.12
CDH4P55283 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC1.8□□□□□ -2.12
CDH4P55283 DUXAP5-201ENST00000529668 529 ntBASIC1.8□□□□□ -2.12
CDH4P55283 BNIP3P6-201ENST00000549284 499 ntBASIC1.8□□□□□ -2.12
CDH4P55283 AC109446.2-201ENST00000567872 497 ntBASIC1.8□□□□□ -2.12
CDH4P55283 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC1.8□□□□□ -2.12
CDH4P55283 AL773524.1-201ENST00000614065 229 ntBASIC1.8□□□□□ -2.12
CDH4P55283 AC026585.1-201ENST00000619582 524 ntBASIC1.8□□□□□ -2.12
CDH4P55283 AC093648.1-201ENST00000623546 606 ntBASIC1.8□□□□□ -2.12
CDH4P55283 AC019226.2-201ENST00000625973 424 ntBASIC1.8□□□□□ -2.12
CDH4P55283 Y_RNA.22-201ENST00000362492 102 ntBASIC1.79□□□□□ -2.12
CDH4P55283 RPL23AP32-201ENST00000395315 459 ntBASIC1.79□□□□□ -2.12
CDH4P55283 CBX3P9-201ENST00000402326 552 ntBASIC1.79□□□□□ -2.12
CDH4P55283 AL356432.1-201ENST00000405809 419 ntBASIC1.79□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 121.3 ms