Protein–RNA interactions for Protein: Q96NU0

CNTNAP3B, Contactin-associated protein-like 3B, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3BQ96NU0 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC4.6□□□□□ -1.67
CNTNAP3BQ96NU0 AP005019.3-201ENST00000620418 560 ntBASIC4.6□□□□□ -1.67
CNTNAP3BQ96NU0 uc_338.7-201ENST00000621834 124 ntBASIC4.6□□□□□ -1.67
CNTNAP3BQ96NU0 SCARNA15.3-201ENST00000626315 122 ntBASIC4.6□□□□□ -1.67
CNTNAP3BQ96NU0 SCARNA4.1-201ENST00000628597 123 ntBASIC4.6□□□□□ -1.67
CNTNAP3BQ96NU0 PSMD5-AS1-215ENST00000640622 205 ntBASIC4.6□□□□□ -1.67
CNTNAP3BQ96NU0 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC4.6□□□□□ -1.67
CNTNAP3BQ96NU0 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
CNTNAP3BQ96NU0 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC4.6□□□□□ -1.67
CNTNAP3BQ96NU0 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC4.6□□□□□ -1.67
CNTNAP3BQ96NU0 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
CNTNAP3BQ96NU0 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
CNTNAP3BQ96NU0 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC4.6□□□□□ -1.67
CNTNAP3BQ96NU0 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC4.6□□□□□ -1.67
CNTNAP3BQ96NU0 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
CNTNAP3BQ96NU0 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC4.6□□□□□ -1.67
CNTNAP3BQ96NU0 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC4.6□□□□□ -1.67
CNTNAP3BQ96NU0 AP000542.2-201ENST00000623199 6179 ntBASIC4.59□□□□□ -1.67
CNTNAP3BQ96NU0 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC4.59□□□□□ -1.67
CNTNAP3BQ96NU0 AC004817.4-201ENST00000602396 3625 ntBASIC4.59□□□□□ -1.67
CNTNAP3BQ96NU0 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
CNTNAP3BQ96NU0 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC4.59□□□□□ -1.67
CNTNAP3BQ96NU0 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC4.59□□□□□ -1.67
CNTNAP3BQ96NU0 UBBP2-201ENST00000376781 231 ntBASIC4.59□□□□□ -1.67
CNTNAP3BQ96NU0 Y_RNA.521-201ENST00000384560 114 ntBASIC4.59□□□□□ -1.67
CNTNAP3BQ96NU0 AC098614.2-201ENST00000426040 255 ntBASIC4.59□□□□□ -1.67
CNTNAP3BQ96NU0 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC4.59□□□□□ -1.67
CNTNAP3BQ96NU0 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC4.59□□□□□ -1.67
CNTNAP3BQ96NU0 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC4.59□□□□□ -1.67
CNTNAP3BQ96NU0 AC245047.8-201ENST00000456455 284 ntBASIC4.59□□□□□ -1.67
CNTNAP3BQ96NU0 AC006026.2-201ENST00000457376 180 ntBASIC4.59□□□□□ -1.67
CNTNAP3BQ96NU0 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
CNTNAP3BQ96NU0 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC4.59□□□□□ -1.67
CNTNAP3BQ96NU0 RNU6-1198P-201ENST00000516904 67 ntBASIC4.59□□□□□ -1.67
CNTNAP3BQ96NU0 AC006349.1-201ENST00000555526 235 ntBASIC4.59□□□□□ -1.67
CNTNAP3BQ96NU0 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC4.59□□□□□ -1.67
CNTNAP3BQ96NU0 AC010999.1-201ENST00000611856 324 ntBASIC4.59□□□□□ -1.67
CNTNAP3BQ96NU0 AP001318.4-201ENST00000616637 121 ntBASIC4.59□□□□□ -1.67
CNTNAP3BQ96NU0 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
CNTNAP3BQ96NU0 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC4.59□□□□□ -1.67
CNTNAP3BQ96NU0 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC4.59□□□□□ -1.67
CNTNAP3BQ96NU0 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC4.59□□□□□ -1.68
CNTNAP3BQ96NU0 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC4.59□□□□□ -1.68
CNTNAP3BQ96NU0 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC4.59□□□□□ -1.68
CNTNAP3BQ96NU0 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.68
CNTNAP3BQ96NU0 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC4.59□□□□□ -1.68
CNTNAP3BQ96NU0 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.68
CNTNAP3BQ96NU0 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
CNTNAP3BQ96NU0 RNU6-1048P-201ENST00000364054 107 ntBASIC4.58□□□□□ -1.68
CNTNAP3BQ96NU0 RNU6-1082P-201ENST00000364574 107 ntBASIC4.58□□□□□ -1.68
CNTNAP3BQ96NU0 SNORD58C-201ENST00000365223 64 ntBASIC4.58□□□□□ -1.68
CNTNAP3BQ96NU0 CRP-203ENST00000368111 512 ntTSL 3 BASIC4.58□□□□□ -1.68
CNTNAP3BQ96NU0 SNORA20B-201ENST00000384220 132 ntBASIC4.58□□□□□ -1.68
CNTNAP3BQ96NU0 MIR124-3-201ENST00000384866 87 ntBASIC4.58□□□□□ -1.68
CNTNAP3BQ96NU0 AL592291.1-201ENST00000403830 352 ntBASIC4.58□□□□□ -1.68
CNTNAP3BQ96NU0 MIR1271-201ENST00000408537 86 ntBASIC4.58□□□□□ -1.68
CNTNAP3BQ96NU0 RNU6-554P-201ENST00000410466 106 ntBASIC4.58□□□□□ -1.68
CNTNAP3BQ96NU0 AL356387.2-201ENST00000422272 243 ntBASIC4.58□□□□□ -1.68
CNTNAP3BQ96NU0 AL358075.3-201ENST00000426289 226 ntBASIC4.58□□□□□ -1.68
CNTNAP3BQ96NU0 AL117339.2-201ENST00000430475 180 ntBASIC4.58□□□□□ -1.68
CNTNAP3BQ96NU0 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
CNTNAP3BQ96NU0 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC4.58□□□□□ -1.68
CNTNAP3BQ96NU0 AL132838.2-201ENST00000492041 314 ntBASIC4.58□□□□□ -1.68
CNTNAP3BQ96NU0 RNU6-1061P-201ENST00000516530 99 ntBASIC4.58□□□□□ -1.68
CNTNAP3BQ96NU0 CYCSP23-201ENST00000519781 313 ntBASIC4.58□□□□□ -1.68
CNTNAP3BQ96NU0 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC4.58□□□□□ -1.68
CNTNAP3BQ96NU0 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC4.58□□□□□ -1.68
CNTNAP3BQ96NU0 AC053481.4-201ENST00000583164 216 ntBASIC4.58□□□□□ -1.68
CNTNAP3BQ96NU0 SNRPGP15-201ENST00000600149 222 ntBASIC4.58□□□□□ -1.68
CNTNAP3BQ96NU0 AL138963.2-201ENST00000605137 226 ntBASIC4.58□□□□□ -1.68
CNTNAP3BQ96NU0 AL121890.5-201ENST00000620848 304 ntBASIC4.58□□□□□ -1.68
CNTNAP3BQ96NU0 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC4.58□□□□□ -1.68
CNTNAP3BQ96NU0 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
CNTNAP3BQ96NU0 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
CNTNAP3BQ96NU0 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
CNTNAP3BQ96NU0 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
CNTNAP3BQ96NU0 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC4.58□□□□□ -1.68
CNTNAP3BQ96NU0 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
CNTNAP3BQ96NU0 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC4.58□□□□□ -1.68
CNTNAP3BQ96NU0 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC4.58□□□□□ -1.68
CNTNAP3BQ96NU0 FAP-203ENST00000443424 2598 ntTSL 2 BASIC4.58□□□□□ -1.68
CNTNAP3BQ96NU0 SCN1A-220ENST00000641603 12506 ntBASIC4.57□□□□□ -1.68
CNTNAP3BQ96NU0 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
CNTNAP3BQ96NU0 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC4.57□□□□□ -1.68
CNTNAP3BQ96NU0 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC4.57□□□□□ -1.68
CNTNAP3BQ96NU0 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC4.57□□□□□ -1.68
CNTNAP3BQ96NU0 Y_RNA.293-201ENST00000364908 93 ntBASIC4.57□□□□□ -1.68
CNTNAP3BQ96NU0 RNU6-969P-201ENST00000383900 105 ntBASIC4.57□□□□□ -1.68
CNTNAP3BQ96NU0 SNORD56.6-201ENST00000384569 71 ntBASIC4.57□□□□□ -1.68
CNTNAP3BQ96NU0 MT-TT-201ENST00000387460 66 ntBASIC4.57□□□□□ -1.68
CNTNAP3BQ96NU0 ELOCP21-201ENST00000412558 336 ntBASIC4.57□□□□□ -1.68
CNTNAP3BQ96NU0 AC114755.2-201ENST00000413520 361 ntBASIC4.57□□□□□ -1.68
CNTNAP3BQ96NU0 UBE2Q2P12-201ENST00000414573 204 ntBASIC4.57□□□□□ -1.68
CNTNAP3BQ96NU0 RPL19P16-201ENST00000433839 588 ntBASIC4.57□□□□□ -1.68
CNTNAP3BQ96NU0 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC4.57□□□□□ -1.68
CNTNAP3BQ96NU0 RPL30P12-201ENST00000474666 353 ntBASIC4.57□□□□□ -1.68
CNTNAP3BQ96NU0 Y_RNA.692-201ENST00000516627 105 ntBASIC4.57□□□□□ -1.68
CNTNAP3BQ96NU0 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC4.57□□□□□ -1.68
CNTNAP3BQ96NU0 AC016256.1-201ENST00000547971 354 ntBASIC4.57□□□□□ -1.68
CNTNAP3BQ96NU0 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC4.57□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 98.7 ms