Protein–RNA interactions for Protein: P04198

MYCN, N-myc proto-oncogene protein, humanhuman

Predicted RBP Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MYCNP04198 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
MYCNP04198 RFFL-202ENST00000394597 4227 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
MYCNP04198 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC6.5□□□□□ -1.37
MYCNP04198 SV2B-201ENST00000330276 11202 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
MYCNP04198 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC6.5□□□□□ -1.37
MYCNP04198 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
MYCNP04198 CLVS1-203ENST00000518592 2880 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
MYCNP04198 AP004607.3-201ENST00000530354 3915 ntBASIC6.5□□□□□ -1.37
MYCNP04198 Y_RNA.298-201ENST00000364960 107 ntBASIC6.5□□□□□ -1.37
MYCNP04198 RNU6-787P-201ENST00000384032 107 ntBASIC6.5□□□□□ -1.37
MYCNP04198 RNU1-77P-201ENST00000390868 162 ntBASIC6.5□□□□□ -1.37
MYCNP04198 VDAC1P3-201ENST00000434069 851 ntBASIC6.5□□□□□ -1.37
MYCNP04198 AL663074.2-201ENST00000440621 479 ntBASIC6.5□□□□□ -1.37
MYCNP04198 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC6.5□□□□□ -1.37
MYCNP04198 RN7SL727P-201ENST00000482164 296 ntBASIC6.5□□□□□ -1.37
MYCNP04198 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC6.5□□□□□ -1.37
MYCNP04198 MIR5197-201ENST00000583721 112 ntBASIC6.5□□□□□ -1.37
MYCNP04198 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
MYCNP04198 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
MYCNP04198 LINC02397-201ENST00000504409 10626 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
MYCNP04198 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
MYCNP04198 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
MYCNP04198 RGPD2-203ENST00000638730 5306 ntAPPRIS ALT2 TSL 5 BASIC6.5□□□□□ -1.37
MYCNP04198 LINC01277-201ENST00000419957 2398 ntTSL 2 BASIC6.5□□□□□ -1.37
MYCNP04198 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC6.5□□□□□ -1.37
MYCNP04198 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
MYCNP04198 SCN2A-202ENST00000375427 8553 ntAPPRIS ALT1 TSL 5 BASIC6.49□□□□□ -1.37
MYCNP04198 DMTF1-204ENST00000413276 3548 ntTSL 5 BASIC6.49□□□□□ -1.37
MYCNP04198 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC6.49□□□□□ -1.37
MYCNP04198 GVINP1-202ENST00000531871 7271 ntBASIC6.49□□□□□ -1.37
MYCNP04198 SATB1-209ENST00000454909 3755 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
MYCNP04198 KMT5B-215ENST00000615954 4306 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
MYCNP04198 PDE4D-202ENST00000317118 2599 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
MYCNP04198 PLCXD3-202ENST00000377801 7704 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
MYCNP04198 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
MYCNP04198 TNFSF4-201ENST00000281834 3470 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
MYCNP04198 DOCK11P1-201ENST00000553480 5932 ntBASIC6.49□□□□□ -1.37
MYCNP04198 RNU6-816P-201ENST00000390914 107 ntBASIC6.49□□□□□ -1.37
MYCNP04198 RNU6-1268P-201ENST00000391214 107 ntBASIC6.49□□□□□ -1.37
MYCNP04198 U8.17-201ENST00000391292 132 ntBASIC6.49□□□□□ -1.37
MYCNP04198 RNU6-1239P-201ENST00000391310 107 ntBASIC6.49□□□□□ -1.37
MYCNP04198 AL645927.1-201ENST00000396783 406 ntBASIC6.49□□□□□ -1.37
MYCNP04198 Y_RNA.601-201ENST00000410500 113 ntBASIC6.49□□□□□ -1.37
MYCNP04198 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC6.49□□□□□ -1.37
MYCNP04198 RNA5SP57-201ENST00000459463 123 ntBASIC6.49□□□□□ -1.37
MYCNP04198 RPL7AP28-201ENST00000464513 571 ntBASIC6.49□□□□□ -1.37
MYCNP04198 NDUFA4P2-201ENST00000489989 244 ntBASIC6.49□□□□□ -1.37
MYCNP04198 Y_RNA.666-201ENST00000516187 112 ntBASIC6.49□□□□□ -1.37
MYCNP04198 AC068657.1-201ENST00000520807 306 ntBASIC6.49□□□□□ -1.37
MYCNP04198 AC091564.3-201ENST00000527398 429 ntTSL 3 BASIC6.49□□□□□ -1.37
MYCNP04198 MRPS21P7-201ENST00000566937 238 ntBASIC6.49□□□□□ -1.37
MYCNP04198 AC091193.1-201ENST00000604640 448 ntBASIC6.49□□□□□ -1.37
MYCNP04198 HOTTIP_4.1-201ENST00000618195 165 ntBASIC6.49□□□□□ -1.37
MYCNP04198 CDC7-201ENST00000234626 3173 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
MYCNP04198 AL360270.2-201ENST00000562952 5985 ntBASIC6.49□□□□□ -1.37
MYCNP04198 SCARNA15-201ENST00000607520 4325 ntBASIC6.49□□□□□ -1.37
MYCNP04198 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC6.49□□□□□ -1.37
MYCNP04198 MAP3K19-204ENST00000392915 5030 ntAPPRIS P3 TSL 5 BASIC6.49□□□□□ -1.37
MYCNP04198 RYR3-202ENST00000415757 15557 ntAPPRIS ALT2 TSL 2 BASIC6.49□□□□□ -1.37
MYCNP04198 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
MYCNP04198 AC104260.2-201ENST00000623551 3497 ntBASIC6.49□□□□□ -1.37
MYCNP04198 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC6.49□□□□□ -1.37
MYCNP04198 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC6.49□□□□□ -1.37
MYCNP04198 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
MYCNP04198 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC6.48□□□□□ -1.37
MYCNP04198 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC6.48□□□□□ -1.37
MYCNP04198 AC239868.2-201ENST00000564237 4527 ntBASIC6.48□□□□□ -1.37
MYCNP04198 RNU1-22P-201ENST00000363334 158 ntBASIC6.48□□□□□ -1.37
MYCNP04198 HIST1H3PS1-201ENST00000404612 417 ntBASIC6.48□□□□□ -1.37
MYCNP04198 RNU2-49P-201ENST00000410666 184 ntBASIC6.48□□□□□ -1.37
MYCNP04198 RN7SL329P-201ENST00000467740 299 ntBASIC6.48□□□□□ -1.37
MYCNP04198 AC092754.1-201ENST00000472975 479 ntBASIC6.48□□□□□ -1.37
MYCNP04198 AC019288.1-201ENST00000557918 224 ntBASIC6.48□□□□□ -1.37
MYCNP04198 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC6.48□□□□□ -1.37
MYCNP04198 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
MYCNP04198 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
MYCNP04198 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC6.48□□□□□ -1.37
MYCNP04198 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
MYCNP04198 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC6.47□□□□□ -1.37
MYCNP04198 ADGRL3-218ENST00000514996 4731 ntAPPRIS ALT2 TSL 5 BASIC6.47□□□□□ -1.37
MYCNP04198 CEP128-202ENST00000281129 4461 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
MYCNP04198 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
MYCNP04198 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
MYCNP04198 AL136964.1-201ENST00000622038 2990 ntBASIC6.47□□□□□ -1.37
MYCNP04198 Y_RNA.10-201ENST00000362371 110 ntBASIC6.47□□□□□ -1.37
MYCNP04198 MIR607-201ENST00000385241 96 ntBASIC6.47□□□□□ -1.37
MYCNP04198 Y_RNA.621-201ENST00000411065 96 ntBASIC6.47□□□□□ -1.37
MYCNP04198 RPL37P18-201ENST00000411602 243 ntBASIC6.47□□□□□ -1.37
MYCNP04198 HMGA1P8-201ENST00000414130 321 ntBASIC6.47□□□□□ -1.37
MYCNP04198 RPL23AP27-201ENST00000415161 451 ntBASIC6.47□□□□□ -1.37
MYCNP04198 RPS12P17-201ENST00000438591 377 ntBASIC6.47□□□□□ -1.37
MYCNP04198 AC078918.1-201ENST00000498515 228 ntBASIC6.47□□□□□ -1.37
MYCNP04198 AL671862.1-201ENST00000515851 349 ntBASIC6.47□□□□□ -1.37
MYCNP04198 MIR449C-201ENST00000516047 92 ntBASIC6.47□□□□□ -1.37
MYCNP04198 RN7SKP282-201ENST00000516824 299 ntBASIC6.47□□□□□ -1.37
MYCNP04198 RNU7-172P-201ENST00000517125 64 ntBASIC6.47□□□□□ -1.37
MYCNP04198 HMGN2P6-201ENST00000551091 273 ntBASIC6.47□□□□□ -1.37
MYCNP04198 PINLYP-205ENST00000569031 557 ntTSL 2 BASIC6.47□□□□□ -1.37
MYCNP04198 U7.3-201ENST00000616123 62 ntBASIC6.47□□□□□ -1.37
MYCNP04198 AC000095.2-202ENST00000637415 154 ntBASIC6.47□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 105.3 ms