Protein–RNA interactions for Protein: Q99453

PHOX2B, Paired mesoderm homeobox protein 2B, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHOX2BQ99453 AL590762.2-201ENST00000395798 571 ntBASIC5.03□□□□□ -1.6
PHOX2BQ99453 RNU2-52P-201ENST00000410680 190 ntBASIC5.03□□□□□ -1.6
PHOX2BQ99453 AC010154.1-201ENST00000425857 269 ntBASIC5.03□□□□□ -1.6
PHOX2BQ99453 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC5.03□□□□□ -1.6
PHOX2BQ99453 RPS29P20-201ENST00000489592 171 ntBASIC5.03□□□□□ -1.6
PHOX2BQ99453 AC098976.1-201ENST00000513014 541 ntBASIC5.03□□□□□ -1.6
PHOX2BQ99453 RNU6-1234P-201ENST00000516877 103 ntBASIC5.03□□□□□ -1.6
PHOX2BQ99453 AC025281.1-201ENST00000567026 265 ntBASIC5.03□□□□□ -1.6
PHOX2BQ99453 MIR3658-201ENST00000636291 56 ntBASIC5.03□□□□□ -1.6
PHOX2BQ99453 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC5.03□□□□□ -1.6
PHOX2BQ99453 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
PHOX2BQ99453 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
PHOX2BQ99453 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
PHOX2BQ99453 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
PHOX2BQ99453 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
PHOX2BQ99453 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
PHOX2BQ99453 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC5.02□□□□□ -1.61
PHOX2BQ99453 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
PHOX2BQ99453 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
PHOX2BQ99453 RNU6-855P-201ENST00000410395 104 ntBASIC5.02□□□□□ -1.61
PHOX2BQ99453 PRSS3P4-201ENST00000453323 162 ntBASIC5.02□□□□□ -1.61
PHOX2BQ99453 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
PHOX2BQ99453 APOA2-205ENST00000468465 421 ntTSL 2 BASIC5.02□□□□□ -1.61
PHOX2BQ99453 RN7SL132P-201ENST00000478131 296 ntBASIC5.02□□□□□ -1.61
PHOX2BQ99453 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC5.02□□□□□ -1.61
PHOX2BQ99453 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC5.02□□□□□ -1.61
PHOX2BQ99453 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC5.02□□□□□ -1.61
PHOX2BQ99453 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC5.02□□□□□ -1.61
PHOX2BQ99453 MIR7853-201ENST00000584820 132 ntBASIC5.02□□□□□ -1.61
PHOX2BQ99453 AL391813.1-201ENST00000603098 260 ntBASIC5.02□□□□□ -1.61
PHOX2BQ99453 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC5.02□□□□□ -1.61
PHOX2BQ99453 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
PHOX2BQ99453 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
PHOX2BQ99453 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
PHOX2BQ99453 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC5.02□□□□□ -1.61
PHOX2BQ99453 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
PHOX2BQ99453 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC5.02□□□□□ -1.61
PHOX2BQ99453 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
PHOX2BQ99453 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC5.02□□□□□ -1.61
PHOX2BQ99453 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
PHOX2BQ99453 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
PHOX2BQ99453 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
PHOX2BQ99453 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
PHOX2BQ99453 U3.9-201ENST00000363823 204 ntBASIC5.01□□□□□ -1.61
PHOX2BQ99453 RNU6-728P-201ENST00000365375 104 ntBASIC5.01□□□□□ -1.61
PHOX2BQ99453 RNU6-969P-201ENST00000383900 105 ntBASIC5.01□□□□□ -1.61
PHOX2BQ99453 MIR554-201ENST00000384874 96 ntBASIC5.01□□□□□ -1.61
PHOX2BQ99453 RNA5SP201-201ENST00000410316 124 ntBASIC5.01□□□□□ -1.61
PHOX2BQ99453 RN7SKP202-201ENST00000410439 330 ntBASIC5.01□□□□□ -1.61
PHOX2BQ99453 CRYBB2P1-203ENST00000415709 538 ntBASIC5.01□□□□□ -1.61
PHOX2BQ99453 PTGES3P4-201ENST00000426243 356 ntBASIC5.01□□□□□ -1.61
PHOX2BQ99453 LINC02210-201ENST00000444561 288 ntBASIC5.01□□□□□ -1.61
PHOX2BQ99453 snoU13.14-201ENST00000459372 104 ntBASIC5.01□□□□□ -1.61
PHOX2BQ99453 AC146507.2-201ENST00000460608 476 ntBASIC5.01□□□□□ -1.61
PHOX2BQ99453 RPS29P2-201ENST00000479278 136 ntBASIC5.01□□□□□ -1.61
PHOX2BQ99453 RNU6-928P-201ENST00000516876 104 ntBASIC5.01□□□□□ -1.61
PHOX2BQ99453 AP004242.1-201ENST00000533701 349 ntBASIC5.01□□□□□ -1.61
PHOX2BQ99453 MIR4724-201ENST00000579485 89 ntBASIC5.01□□□□□ -1.61
PHOX2BQ99453 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC5.01□□□□□ -1.61
PHOX2BQ99453 AL139124.1-201ENST00000609123 421 ntBASIC5.01□□□□□ -1.61
PHOX2BQ99453 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC5.01□□□□□ -1.61
PHOX2BQ99453 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC5.01□□□□□ -1.61
PHOX2BQ99453 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
PHOX2BQ99453 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC5.01□□□□□ -1.61
PHOX2BQ99453 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
PHOX2BQ99453 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC5.01□□□□□ -1.61
PHOX2BQ99453 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
PHOX2BQ99453 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
PHOX2BQ99453 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
PHOX2BQ99453 Z95331.1-201ENST00000623075 23112 ntBASIC5□□□□□ -1.61
PHOX2BQ99453 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC5□□□□□ -1.61
PHOX2BQ99453 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC5□□□□□ -1.61
PHOX2BQ99453 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
PHOX2BQ99453 RNU6-1010P-201ENST00000362757 107 ntBASIC5□□□□□ -1.61
PHOX2BQ99453 RNU6-19P-201ENST00000384718 107 ntBASIC5□□□□□ -1.61
PHOX2BQ99453 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC5□□□□□ -1.61
PHOX2BQ99453 AC073465.2-201ENST00000440938 498 ntBASIC5□□□□□ -1.61
PHOX2BQ99453 AC004386.2-201ENST00000441858 148 ntBASIC5□□□□□ -1.61
PHOX2BQ99453 SRIP1-201ENST00000489235 288 ntBASIC5□□□□□ -1.61
PHOX2BQ99453 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC5□□□□□ -1.61
PHOX2BQ99453 AP001328.1-201ENST00000528550 176 ntBASIC5□□□□□ -1.61
PHOX2BQ99453 MIR3944-201ENST00000581277 108 ntBASIC5□□□□□ -1.61
PHOX2BQ99453 AC114781.5-201ENST00000615297 108 ntBASIC5□□□□□ -1.61
PHOX2BQ99453 AC018692.3-201ENST00000623929 123 ntBASIC5□□□□□ -1.61
PHOX2BQ99453 MIR6844-201ENST00000637122 62 ntBASIC5□□□□□ -1.61
PHOX2BQ99453 AC007496.3-201ENST00000624987 3443 ntBASIC5□□□□□ -1.61
PHOX2BQ99453 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
PHOX2BQ99453 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC5□□□□□ -1.61
PHOX2BQ99453 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC5□□□□□ -1.61
PHOX2BQ99453 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC5□□□□□ -1.61
PHOX2BQ99453 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC5□□□□□ -1.61
PHOX2BQ99453 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC5□□□□□ -1.61
PHOX2BQ99453 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC5□□□□□ -1.61
PHOX2BQ99453 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC5□□□□□ -1.61
PHOX2BQ99453 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC5□□□□□ -1.61
PHOX2BQ99453 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC5□□□□□ -1.61
PHOX2BQ99453 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
PHOX2BQ99453 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC4.99□□□□□ -1.61
PHOX2BQ99453 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC4.99□□□□□ -1.61
PHOX2BQ99453 AF117829.1-206ENST00000621883 3802 ntBASIC4.99□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 111.7 ms