Protein–RNA interactions for Protein: Q504U0

C4orf46, Renal cancer differentiation gene 1 protein, humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C4orf46Q504U0 RNU6-827P-201ENST00000365553 106 ntBASIC3.21□□□□□ -1.9
C4orf46Q504U0 RNU6-842P-201ENST00000384269 107 ntBASIC3.21□□□□□ -1.9
C4orf46Q504U0 HMGN2P35-201ENST00000412164 270 ntBASIC3.21□□□□□ -1.9
C4orf46Q504U0 COX6B1P7-201ENST00000430845 235 ntBASIC3.21□□□□□ -1.9
C4orf46Q504U0 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC3.21□□□□□ -1.9
C4orf46Q504U0 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC3.21□□□□□ -1.9
C4orf46Q504U0 CYP2C59P-201ENST00000457790 269 ntBASIC3.21□□□□□ -1.9
C4orf46Q504U0 RN7SL354P-201ENST00000469282 294 ntBASIC3.21□□□□□ -1.9
C4orf46Q504U0 RN7SL860P-201ENST00000473738 223 ntBASIC3.21□□□□□ -1.9
C4orf46Q504U0 FO393415.2-201ENST00000480085 343 ntBASIC3.21□□□□□ -1.9
C4orf46Q504U0 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC3.21□□□□□ -1.9
C4orf46Q504U0 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC3.21□□□□□ -1.9
C4orf46Q504U0 Y_RNA.711-201ENST00000516993 102 ntBASIC3.21□□□□□ -1.9
C4orf46Q504U0 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC3.21□□□□□ -1.9
C4orf46Q504U0 ASB8-204ENST00000536071 568 ntTSL 4 BASIC3.21□□□□□ -1.9
C4orf46Q504U0 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC3.21□□□□□ -1.9
C4orf46Q504U0 AC103996.1-201ENST00000555468 102 ntBASIC3.21□□□□□ -1.9
C4orf46Q504U0 AC105137.2-201ENST00000569073 466 ntBASIC3.21□□□□□ -1.9
C4orf46Q504U0 MTCO3P13-201ENST00000577757 781 ntBASIC3.21□□□□□ -1.9
C4orf46Q504U0 MIR4270-201ENST00000581799 70 ntBASIC3.21□□□□□ -1.9
C4orf46Q504U0 AC011494.1-201ENST00000596454 237 ntBASIC3.21□□□□□ -1.9
C4orf46Q504U0 AC068790.4-201ENST00000602474 263 ntBASIC3.21□□□□□ -1.9
C4orf46Q504U0 AL137849.1-201ENST00000604767 169 ntBASIC3.21□□□□□ -1.9
C4orf46Q504U0 AL160281.1-201ENST00000605307 311 ntBASIC3.21□□□□□ -1.9
C4orf46Q504U0 SDR42E1P1-201ENST00000611327 477 ntBASIC3.21□□□□□ -1.9
C4orf46Q504U0 MIR5739-201ENST00000619803 80 ntBASIC3.21□□□□□ -1.9
C4orf46Q504U0 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.21□□□□□ -1.9
C4orf46Q504U0 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.21□□□□□ -1.9
C4orf46Q504U0 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
C4orf46Q504U0 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC3.21□□□□□ -1.9
C4orf46Q504U0 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
C4orf46Q504U0 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC3.2□□□□□ -1.9
C4orf46Q504U0 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
C4orf46Q504U0 AC073346.2-201ENST00000624724 2058 ntBASIC3.2□□□□□ -1.9
C4orf46Q504U0 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.2□□□□□ -1.9
C4orf46Q504U0 RNA5SP443-201ENST00000363083 132 ntBASIC3.2□□□□□ -1.9
C4orf46Q504U0 RNU6-1317P-201ENST00000364582 104 ntBASIC3.2□□□□□ -1.9
C4orf46Q504U0 RNU6-1072P-201ENST00000384703 107 ntBASIC3.2□□□□□ -1.9
C4orf46Q504U0 RNU6-443P-201ENST00000384780 107 ntBASIC3.2□□□□□ -1.9
C4orf46Q504U0 RN7SKP156-201ENST00000410308 342 ntBASIC3.2□□□□□ -1.9
C4orf46Q504U0 RNU6-325P-201ENST00000411132 105 ntBASIC3.2□□□□□ -1.9
C4orf46Q504U0 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC3.2□□□□□ -1.9
C4orf46Q504U0 AC113618.1-201ENST00000416747 285 ntBASIC3.2□□□□□ -1.9
C4orf46Q504U0 CYCSP48-201ENST00000417124 323 ntBASIC3.2□□□□□ -1.9
C4orf46Q504U0 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC3.2□□□□□ -1.9
C4orf46Q504U0 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC3.2□□□□□ -1.9
C4orf46Q504U0 MTND4P19-201ENST00000446659 478 ntBASIC3.2□□□□□ -1.9
C4orf46Q504U0 PCMTD1P1-201ENST00000455560 355 ntBASIC3.2□□□□□ -1.9
C4orf46Q504U0 AC103987.1-201ENST00000473394 348 ntBASIC3.2□□□□□ -1.9
C4orf46Q504U0 RN7SL604P-201ENST00000492589 296 ntBASIC3.2□□□□□ -1.9
C4orf46Q504U0 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC3.2□□□□□ -1.9
C4orf46Q504U0 AC231760.1-201ENST00000498002 260 ntBASIC3.2□□□□□ -1.9
C4orf46Q504U0 HMGN1P11-201ENST00000508668 303 ntBASIC3.2□□□□□ -1.9
C4orf46Q504U0 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC3.2□□□□□ -1.9
C4orf46Q504U0 AC099522.1-202ENST00000514718 367 ntBASIC3.2□□□□□ -1.9
C4orf46Q504U0 SNORA25.11-201ENST00000515935 105 ntBASIC3.2□□□□□ -1.9
C4orf46Q504U0 Y_RNA.687-201ENST00000516558 91 ntBASIC3.2□□□□□ -1.9
C4orf46Q504U0 RN7SKP272-201ENST00000516988 232 ntBASIC3.2□□□□□ -1.9
C4orf46Q504U0 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC3.2□□□□□ -1.9
C4orf46Q504U0 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC3.2□□□□□ -1.9
C4orf46Q504U0 SNRPGP18-201ENST00000553000 214 ntBASIC3.2□□□□□ -1.9
C4orf46Q504U0 TRAV32-201ENST00000553993 340 ntBASIC3.2□□□□□ -1.9
C4orf46Q504U0 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC3.2□□□□□ -1.9
C4orf46Q504U0 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC3.2□□□□□ -1.9
C4orf46Q504U0 AC100830.2-201ENST00000581636 240 ntBASIC3.2□□□□□ -1.9
C4orf46Q504U0 BNIP3P16-201ENST00000589779 534 ntBASIC3.2□□□□□ -1.9
C4orf46Q504U0 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC3.2□□□□□ -1.9
C4orf46Q504U0 AL161756.2-201ENST00000604597 246 ntBASIC3.2□□□□□ -1.9
C4orf46Q504U0 AL590392.1-201ENST00000604960 446 ntBASIC3.2□□□□□ -1.9
C4orf46Q504U0 AC116312.1-201ENST00000606841 314 ntBASIC3.2□□□□□ -1.9
C4orf46Q504U0 AC007485.1-201ENST00000616755 206 ntBASIC3.2□□□□□ -1.9
C4orf46Q504U0 AC024581.2-201ENST00000619986 252 ntBASIC3.2□□□□□ -1.9
C4orf46Q504U0 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC3.2□□□□□ -1.9
C4orf46Q504U0 AP006437.1-201ENST00000641440 3685 ntBASIC3.2□□□□□ -1.9
C4orf46Q504U0 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
C4orf46Q504U0 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC3.2□□□□□ -1.9
C4orf46Q504U0 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
C4orf46Q504U0 Y_RNA.5-201ENST00000362334 102 ntBASIC3.19□□□□□ -1.9
C4orf46Q504U0 RNU6-428P-201ENST00000362942 107 ntBASIC3.19□□□□□ -1.9
C4orf46Q504U0 Y_RNA.202-201ENST00000364083 110 ntBASIC3.19□□□□□ -1.9
C4orf46Q504U0 SNORA63C-201ENST00000364578 129 ntBASIC3.19□□□□□ -1.9
C4orf46Q504U0 RNVU1-6-201ENST00000364688 164 ntBASIC3.19□□□□□ -1.9
C4orf46Q504U0 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC3.19□□□□□ -1.9
C4orf46Q504U0 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
C4orf46Q504U0 MIR550A3-201ENST00000390735 95 ntBASIC3.19□□□□□ -1.9
C4orf46Q504U0 RPS26P8-201ENST00000393490 348 ntBASIC3.19□□□□□ -1.9
C4orf46Q504U0 AL133475.1-201ENST00000404414 305 ntBASIC3.19□□□□□ -1.9
C4orf46Q504U0 RNU4ATAC16P-201ENST00000408512 126 ntBASIC3.19□□□□□ -1.9
C4orf46Q504U0 AL030996.1-201ENST00000411430 235 ntBASIC3.19□□□□□ -1.9
C4orf46Q504U0 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC3.19□□□□□ -1.9
C4orf46Q504U0 SYF2P2-201ENST00000417620 583 ntBASIC3.19□□□□□ -1.9
C4orf46Q504U0 UBE2V1P4-201ENST00000425374 344 ntBASIC3.19□□□□□ -1.9
C4orf46Q504U0 RPEP3-201ENST00000425462 676 ntBASIC3.19□□□□□ -1.9
C4orf46Q504U0 AC006989.1-201ENST00000427212 131 ntBASIC3.19□□□□□ -1.9
C4orf46Q504U0 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC3.19□□□□□ -1.9
C4orf46Q504U0 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC3.19□□□□□ -1.9
C4orf46Q504U0 RPL21P11-201ENST00000461458 483 ntBASIC3.19□□□□□ -1.9
C4orf46Q504U0 AC008571.1-201ENST00000467232 300 ntBASIC3.19□□□□□ -1.9
C4orf46Q504U0 RPS4XP22-201ENST00000480755 780 ntBASIC3.19□□□□□ -1.9
C4orf46Q504U0 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC3.19□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 121.9 ms