Protein–RNA interactions for Protein: Q9Y6Q6

TNFRSF11A, Tumor necrosis factor receptor superfamily member 11A, humanhuman

Predicted RBP Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11AQ9Y6Q6 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
TNFRSF11AQ9Y6Q6 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC23.26■■□□□ 1.31
TNFRSF11AQ9Y6Q6 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
TNFRSF11AQ9Y6Q6 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC23.26■■□□□ 1.31
TNFRSF11AQ9Y6Q6 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
TNFRSF11AQ9Y6Q6 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC23.26■■□□□ 1.31
TNFRSF11AQ9Y6Q6 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC23.26■■□□□ 1.31
TNFRSF11AQ9Y6Q6 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
TNFRSF11AQ9Y6Q6 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
TNFRSF11AQ9Y6Q6 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
TNFRSF11AQ9Y6Q6 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
TNFRSF11AQ9Y6Q6 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC23.25■■□□□ 1.31
TNFRSF11AQ9Y6Q6 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC23.25■■□□□ 1.31
TNFRSF11AQ9Y6Q6 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
TNFRSF11AQ9Y6Q6 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC23.25■■□□□ 1.31
TNFRSF11AQ9Y6Q6 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
TNFRSF11AQ9Y6Q6 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
TNFRSF11AQ9Y6Q6 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC23.25■■□□□ 1.31
TNFRSF11AQ9Y6Q6 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC23.25■■□□□ 1.31
TNFRSF11AQ9Y6Q6 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC23.25■■□□□ 1.31
TNFRSF11AQ9Y6Q6 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC23.25■■□□□ 1.31
TNFRSF11AQ9Y6Q6 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC23.25■■□□□ 1.31
TNFRSF11AQ9Y6Q6 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC23.25■■□□□ 1.31
TNFRSF11AQ9Y6Q6 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
TNFRSF11AQ9Y6Q6 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC23.24■■□□□ 1.31
TNFRSF11AQ9Y6Q6 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC23.24■■□□□ 1.31
TNFRSF11AQ9Y6Q6 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
TNFRSF11AQ9Y6Q6 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
TNFRSF11AQ9Y6Q6 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
TNFRSF11AQ9Y6Q6 AC117947.1-201ENST00000427448 529 ntBASIC23.24■■□□□ 1.31
TNFRSF11AQ9Y6Q6 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC23.24■■□□□ 1.31
TNFRSF11AQ9Y6Q6 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC23.24■■□□□ 1.31
TNFRSF11AQ9Y6Q6 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
TNFRSF11AQ9Y6Q6 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC23.24■■□□□ 1.31
TNFRSF11AQ9Y6Q6 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC23.24■■□□□ 1.31
TNFRSF11AQ9Y6Q6 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
TNFRSF11AQ9Y6Q6 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC23.24■■□□□ 1.31
TNFRSF11AQ9Y6Q6 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC23.24■■□□□ 1.31
TNFRSF11AQ9Y6Q6 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
TNFRSF11AQ9Y6Q6 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC23.24■■□□□ 1.31
TNFRSF11AQ9Y6Q6 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
TNFRSF11AQ9Y6Q6 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC23.24■■□□□ 1.31
TNFRSF11AQ9Y6Q6 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
TNFRSF11AQ9Y6Q6 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
TNFRSF11AQ9Y6Q6 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC23.24■■□□□ 1.31
TNFRSF11AQ9Y6Q6 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC23.24■■□□□ 1.31
TNFRSF11AQ9Y6Q6 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC23.24■■□□□ 1.31
TNFRSF11AQ9Y6Q6 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
TNFRSF11AQ9Y6Q6 LGALS8-AS1-201ENST00000487567 1457 ntBASIC23.24■■□□□ 1.31
TNFRSF11AQ9Y6Q6 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC23.23■■□□□ 1.31
TNFRSF11AQ9Y6Q6 AL512353.2-201ENST00000448759 1962 ntBASIC23.23■■□□□ 1.31
TNFRSF11AQ9Y6Q6 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC23.23■■□□□ 1.31
TNFRSF11AQ9Y6Q6 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC23.23■■□□□ 1.31
TNFRSF11AQ9Y6Q6 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC23.23■■□□□ 1.31
TNFRSF11AQ9Y6Q6 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC23.23■■□□□ 1.31
TNFRSF11AQ9Y6Q6 ILF2-202ENST00000368681 726 ntTSL 2 BASIC23.23■■□□□ 1.31
TNFRSF11AQ9Y6Q6 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
TNFRSF11AQ9Y6Q6 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC23.23■■□□□ 1.31
TNFRSF11AQ9Y6Q6 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC23.23■■□□□ 1.31
TNFRSF11AQ9Y6Q6 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC23.23■■□□□ 1.31
TNFRSF11AQ9Y6Q6 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
TNFRSF11AQ9Y6Q6 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
TNFRSF11AQ9Y6Q6 GXYLT1P6-201ENST00000456472 1187 ntBASIC23.23■■□□□ 1.31
TNFRSF11AQ9Y6Q6 CR769767.2-201ENST00000622735 460 ntBASIC23.23■■□□□ 1.31
TNFRSF11AQ9Y6Q6 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
TNFRSF11AQ9Y6Q6 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
TNFRSF11AQ9Y6Q6 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
TNFRSF11AQ9Y6Q6 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC23.23■■□□□ 1.31
TNFRSF11AQ9Y6Q6 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
TNFRSF11AQ9Y6Q6 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC23.22■■□□□ 1.31
TNFRSF11AQ9Y6Q6 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
TNFRSF11AQ9Y6Q6 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC23.22■■□□□ 1.31
TNFRSF11AQ9Y6Q6 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC23.22■■□□□ 1.31
TNFRSF11AQ9Y6Q6 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
TNFRSF11AQ9Y6Q6 AC141257.4-201ENST00000634557 245 ntBASIC23.22■■□□□ 1.31
TNFRSF11AQ9Y6Q6 AC136944.6-201ENST00000634818 245 ntBASIC23.22■■□□□ 1.31
TNFRSF11AQ9Y6Q6 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
TNFRSF11AQ9Y6Q6 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC23.22■■□□□ 1.31
TNFRSF11AQ9Y6Q6 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC23.22■■□□□ 1.31
TNFRSF11AQ9Y6Q6 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
TNFRSF11AQ9Y6Q6 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC23.22■■□□□ 1.31
TNFRSF11AQ9Y6Q6 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
TNFRSF11AQ9Y6Q6 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
TNFRSF11AQ9Y6Q6 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC23.22■■□□□ 1.31
TNFRSF11AQ9Y6Q6 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC23.22■■□□□ 1.31
TNFRSF11AQ9Y6Q6 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
TNFRSF11AQ9Y6Q6 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC23.22■■□□□ 1.31
TNFRSF11AQ9Y6Q6 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC23.21■■□□□ 1.31
TNFRSF11AQ9Y6Q6 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
TNFRSF11AQ9Y6Q6 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC23.21■■□□□ 1.31
TNFRSF11AQ9Y6Q6 AC139887.4-201ENST00000607877 719 ntBASIC23.21■■□□□ 1.31
TNFRSF11AQ9Y6Q6 AC010331.1-201ENST00000611423 582 ntBASIC23.21■■□□□ 1.31
TNFRSF11AQ9Y6Q6 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC23.21■■□□□ 1.31
TNFRSF11AQ9Y6Q6 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
TNFRSF11AQ9Y6Q6 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC23.21■■□□□ 1.31
TNFRSF11AQ9Y6Q6 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
TNFRSF11AQ9Y6Q6 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC23.21■■□□□ 1.31
TNFRSF11AQ9Y6Q6 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC23.21■■□□□ 1.31
TNFRSF11AQ9Y6Q6 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC23.21■■□□□ 1.31
TNFRSF11AQ9Y6Q6 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC23.21■■□□□ 1.31
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms