Protein–RNA interactions for Protein: Q9Y6M4

CSNK1G3, Casein kinase I isoform gamma-3, humanhuman

Predictions only

Length 447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G3Q9Y6M4 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC18.59■□□□□ 0.57
CSNK1G3Q9Y6M4 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
CSNK1G3Q9Y6M4 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CSNK1G3Q9Y6M4 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.57
CSNK1G3Q9Y6M4 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
CSNK1G3Q9Y6M4 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.57
CSNK1G3Q9Y6M4 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CSNK1G3Q9Y6M4 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CSNK1G3Q9Y6M4 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC18.58■□□□□ 0.57
CSNK1G3Q9Y6M4 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC18.58■□□□□ 0.56
CSNK1G3Q9Y6M4 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CSNK1G3Q9Y6M4 USP39-204ENST00000409766 2033 ntTSL 2 BASIC18.58■□□□□ 0.56
CSNK1G3Q9Y6M4 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
CSNK1G3Q9Y6M4 TSPY23P-201ENST00000440136 739 ntBASIC18.58■□□□□ 0.56
CSNK1G3Q9Y6M4 NMU-205ENST00000511469 756 ntTSL 3 BASIC18.58■□□□□ 0.56
CSNK1G3Q9Y6M4 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CSNK1G3Q9Y6M4 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC18.58■□□□□ 0.56
CSNK1G3Q9Y6M4 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CSNK1G3Q9Y6M4 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CSNK1G3Q9Y6M4 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
CSNK1G3Q9Y6M4 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CSNK1G3Q9Y6M4 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC18.58■□□□□ 0.56
CSNK1G3Q9Y6M4 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CSNK1G3Q9Y6M4 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CSNK1G3Q9Y6M4 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
CSNK1G3Q9Y6M4 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CSNK1G3Q9Y6M4 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC18.57■□□□□ 0.56
CSNK1G3Q9Y6M4 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CSNK1G3Q9Y6M4 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC18.57■□□□□ 0.56
CSNK1G3Q9Y6M4 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CSNK1G3Q9Y6M4 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CSNK1G3Q9Y6M4 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
CSNK1G3Q9Y6M4 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC18.57■□□□□ 0.56
CSNK1G3Q9Y6M4 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
CSNK1G3Q9Y6M4 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CSNK1G3Q9Y6M4 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CSNK1G3Q9Y6M4 KRT18P38-201ENST00000449496 1282 ntBASIC18.57■□□□□ 0.56
CSNK1G3Q9Y6M4 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC18.57■□□□□ 0.56
CSNK1G3Q9Y6M4 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC18.57■□□□□ 0.56
CSNK1G3Q9Y6M4 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC18.57■□□□□ 0.56
CSNK1G3Q9Y6M4 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC18.57■□□□□ 0.56
CSNK1G3Q9Y6M4 AL136038.3-201ENST00000561909 1096 ntBASIC18.57■□□□□ 0.56
CSNK1G3Q9Y6M4 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC18.57■□□□□ 0.56
CSNK1G3Q9Y6M4 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC18.57■□□□□ 0.56
CSNK1G3Q9Y6M4 AC116407.4-201ENST00000623319 1061 ntBASIC18.57■□□□□ 0.56
CSNK1G3Q9Y6M4 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
CSNK1G3Q9Y6M4 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC18.57■□□□□ 0.56
CSNK1G3Q9Y6M4 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
CSNK1G3Q9Y6M4 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CSNK1G3Q9Y6M4 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
CSNK1G3Q9Y6M4 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC18.57■□□□□ 0.56
CSNK1G3Q9Y6M4 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CSNK1G3Q9Y6M4 TCF3P1-201ENST00000423021 1937 ntBASIC18.57■□□□□ 0.56
CSNK1G3Q9Y6M4 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CSNK1G3Q9Y6M4 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CSNK1G3Q9Y6M4 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CSNK1G3Q9Y6M4 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CSNK1G3Q9Y6M4 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CSNK1G3Q9Y6M4 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CSNK1G3Q9Y6M4 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CSNK1G3Q9Y6M4 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CSNK1G3Q9Y6M4 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CSNK1G3Q9Y6M4 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC18.56■□□□□ 0.56
CSNK1G3Q9Y6M4 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC18.56■□□□□ 0.56
CSNK1G3Q9Y6M4 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CSNK1G3Q9Y6M4 LY6E-213ENST00000522528 606 ntTSL 3 BASIC18.56■□□□□ 0.56
CSNK1G3Q9Y6M4 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
CSNK1G3Q9Y6M4 USF2-205ENST00000594064 1179 ntTSL 2 BASIC18.56■□□□□ 0.56
CSNK1G3Q9Y6M4 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CSNK1G3Q9Y6M4 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC18.56■□□□□ 0.56
CSNK1G3Q9Y6M4 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC18.56■□□□□ 0.56
CSNK1G3Q9Y6M4 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC18.56■□□□□ 0.56
CSNK1G3Q9Y6M4 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CSNK1G3Q9Y6M4 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
CSNK1G3Q9Y6M4 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
CSNK1G3Q9Y6M4 TBC1D3P2-202ENST00000577902 1649 ntBASIC18.56■□□□□ 0.56
CSNK1G3Q9Y6M4 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC18.55■□□□□ 0.56
CSNK1G3Q9Y6M4 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CSNK1G3Q9Y6M4 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC18.55■□□□□ 0.56
CSNK1G3Q9Y6M4 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
CSNK1G3Q9Y6M4 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC18.55■□□□□ 0.56
CSNK1G3Q9Y6M4 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC18.55■□□□□ 0.56
CSNK1G3Q9Y6M4 AC005332.1-201ENST00000577698 1310 ntBASIC18.55■□□□□ 0.56
CSNK1G3Q9Y6M4 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC18.55■□□□□ 0.56
CSNK1G3Q9Y6M4 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC18.55■□□□□ 0.56
CSNK1G3Q9Y6M4 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC18.55■□□□□ 0.56
CSNK1G3Q9Y6M4 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CSNK1G3Q9Y6M4 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CSNK1G3Q9Y6M4 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CSNK1G3Q9Y6M4 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC18.55■□□□□ 0.56
CSNK1G3Q9Y6M4 BET1L-202ENST00000332865 533 ntTSL 5 BASIC18.55■□□□□ 0.56
CSNK1G3Q9Y6M4 GAD2-202ENST00000376248 680 ntTSL 5 BASIC18.55■□□□□ 0.56
CSNK1G3Q9Y6M4 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC18.55■□□□□ 0.56
CSNK1G3Q9Y6M4 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CSNK1G3Q9Y6M4 GCSHP2-201ENST00000560971 527 ntBASIC18.55■□□□□ 0.56
CSNK1G3Q9Y6M4 MIR4674-201ENST00000582457 87 ntBASIC18.55■□□□□ 0.56
CSNK1G3Q9Y6M4 METTL23-204ENST00000586752 904 ntTSL 2 BASIC18.55■□□□□ 0.56
CSNK1G3Q9Y6M4 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CSNK1G3Q9Y6M4 CR769767.2-201ENST00000622735 460 ntBASIC18.55■□□□□ 0.56
CSNK1G3Q9Y6M4 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC18.55■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 48.1 ms