Protein–RNA interactions for Protein: Q9UQN3

CHMP2B, Charged multivesicular body protein 2b, humanhuman

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2BQ9UQN3 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC19.34■□□□□ 0.69
CHMP2BQ9UQN3 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC19.34■□□□□ 0.69
CHMP2BQ9UQN3 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CHMP2BQ9UQN3 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC19.34■□□□□ 0.69
CHMP2BQ9UQN3 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CHMP2BQ9UQN3 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CHMP2BQ9UQN3 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CHMP2BQ9UQN3 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CHMP2BQ9UQN3 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC19.34■□□□□ 0.69
CHMP2BQ9UQN3 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC19.34■□□□□ 0.69
CHMP2BQ9UQN3 AL109923.1-201ENST00000618799 583 ntBASIC19.34■□□□□ 0.69
CHMP2BQ9UQN3 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CHMP2BQ9UQN3 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
CHMP2BQ9UQN3 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC19.34■□□□□ 0.69
CHMP2BQ9UQN3 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
CHMP2BQ9UQN3 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CHMP2BQ9UQN3 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC19.34■□□□□ 0.69
CHMP2BQ9UQN3 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC19.34■□□□□ 0.69
CHMP2BQ9UQN3 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC19.34■□□□□ 0.69
CHMP2BQ9UQN3 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
CHMP2BQ9UQN3 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CHMP2BQ9UQN3 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CHMP2BQ9UQN3 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
CHMP2BQ9UQN3 WAC-202ENST00000347934 2839 ntTSL 5 BASIC19.33■□□□□ 0.69
CHMP2BQ9UQN3 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC19.33■□□□□ 0.69
CHMP2BQ9UQN3 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CHMP2BQ9UQN3 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CHMP2BQ9UQN3 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
CHMP2BQ9UQN3 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC19.33■□□□□ 0.69
CHMP2BQ9UQN3 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
CHMP2BQ9UQN3 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC19.33■□□□□ 0.69
CHMP2BQ9UQN3 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
CHMP2BQ9UQN3 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CHMP2BQ9UQN3 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
CHMP2BQ9UQN3 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
CHMP2BQ9UQN3 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC19.33■□□□□ 0.69
CHMP2BQ9UQN3 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC19.33■□□□□ 0.68
CHMP2BQ9UQN3 AC069152.1-201ENST00000438030 544 ntBASIC19.33■□□□□ 0.68
CHMP2BQ9UQN3 RHOD-202ENST00000532559 538 ntTSL 3 BASIC19.33■□□□□ 0.68
CHMP2BQ9UQN3 RGMA-211ENST00000557420 989 ntTSL 3 BASIC19.33■□□□□ 0.68
CHMP2BQ9UQN3 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC19.33■□□□□ 0.68
CHMP2BQ9UQN3 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
CHMP2BQ9UQN3 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CHMP2BQ9UQN3 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
CHMP2BQ9UQN3 AC135050.7-201ENST00000624508 2218 ntBASIC19.33■□□□□ 0.68
CHMP2BQ9UQN3 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
CHMP2BQ9UQN3 ANO7L1-203ENST00000602586 1720 ntBASIC19.33■□□□□ 0.68
CHMP2BQ9UQN3 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC19.33■□□□□ 0.68
CHMP2BQ9UQN3 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CHMP2BQ9UQN3 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CHMP2BQ9UQN3 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC19.33■□□□□ 0.68
CHMP2BQ9UQN3 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CHMP2BQ9UQN3 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CHMP2BQ9UQN3 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC19.32■□□□□ 0.68
CHMP2BQ9UQN3 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
CHMP2BQ9UQN3 AC018470.1-201ENST00000624790 3129 ntBASIC19.32■□□□□ 0.68
CHMP2BQ9UQN3 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
CHMP2BQ9UQN3 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
CHMP2BQ9UQN3 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CHMP2BQ9UQN3 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC19.32■□□□□ 0.68
CHMP2BQ9UQN3 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CHMP2BQ9UQN3 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC19.32■□□□□ 0.68
CHMP2BQ9UQN3 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC19.32■□□□□ 0.68
CHMP2BQ9UQN3 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CHMP2BQ9UQN3 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
CHMP2BQ9UQN3 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
CHMP2BQ9UQN3 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
CHMP2BQ9UQN3 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CHMP2BQ9UQN3 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CHMP2BQ9UQN3 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CHMP2BQ9UQN3 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC19.32■□□□□ 0.68
CHMP2BQ9UQN3 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC19.32■□□□□ 0.68
CHMP2BQ9UQN3 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC19.32■□□□□ 0.68
CHMP2BQ9UQN3 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC19.32■□□□□ 0.68
CHMP2BQ9UQN3 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC19.32■□□□□ 0.68
CHMP2BQ9UQN3 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CHMP2BQ9UQN3 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC19.32■□□□□ 0.68
CHMP2BQ9UQN3 Six3os1_6.1-201ENST00000620790 196 ntBASIC19.32■□□□□ 0.68
CHMP2BQ9UQN3 AC133041.1-202ENST00000642053 222 ntBASIC19.32■□□□□ 0.68
CHMP2BQ9UQN3 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
CHMP2BQ9UQN3 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CHMP2BQ9UQN3 AL390961.4-201ENST00000623958 2535 ntBASIC19.32■□□□□ 0.68
CHMP2BQ9UQN3 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC19.32■□□□□ 0.68
CHMP2BQ9UQN3 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CHMP2BQ9UQN3 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CHMP2BQ9UQN3 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
CHMP2BQ9UQN3 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CHMP2BQ9UQN3 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC19.32■□□□□ 0.68
CHMP2BQ9UQN3 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
CHMP2BQ9UQN3 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CHMP2BQ9UQN3 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC19.32■□□□□ 0.68
CHMP2BQ9UQN3 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
CHMP2BQ9UQN3 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC19.31■□□□□ 0.68
CHMP2BQ9UQN3 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CHMP2BQ9UQN3 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
CHMP2BQ9UQN3 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CHMP2BQ9UQN3 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CHMP2BQ9UQN3 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
CHMP2BQ9UQN3 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
CHMP2BQ9UQN3 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC19.31■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms