Protein–RNA interactions for Protein: Q9UQ90

SPG7, Paraplegin, humanhuman

Predictions only

Length 795 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7Q9UQ90 AC011498.5-201ENST00000592027 486 ntBASIC24.83■■□□□ 1.57
SPG7Q9UQ90 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC24.83■■□□□ 1.57
SPG7Q9UQ90 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC24.83■■□□□ 1.57
SPG7Q9UQ90 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC24.83■■□□□ 1.57
SPG7Q9UQ90 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.56
SPG7Q9UQ90 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
SPG7Q9UQ90 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
SPG7Q9UQ90 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC24.82■■□□□ 1.56
SPG7Q9UQ90 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC24.82■■□□□ 1.56
SPG7Q9UQ90 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
SPG7Q9UQ90 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC24.82■■□□□ 1.56
SPG7Q9UQ90 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC24.82■■□□□ 1.56
SPG7Q9UQ90 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
SPG7Q9UQ90 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC24.82■■□□□ 1.56
SPG7Q9UQ90 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC24.82■■□□□ 1.56
SPG7Q9UQ90 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC24.82■■□□□ 1.56
SPG7Q9UQ90 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC24.82■■□□□ 1.56
SPG7Q9UQ90 LINC01006-201ENST00000333319 2292 ntBASIC24.82■■□□□ 1.56
SPG7Q9UQ90 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC24.82■■□□□ 1.56
SPG7Q9UQ90 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
SPG7Q9UQ90 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
SPG7Q9UQ90 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
SPG7Q9UQ90 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC24.81■■□□□ 1.56
SPG7Q9UQ90 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
SPG7Q9UQ90 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC24.81■■□□□ 1.56
SPG7Q9UQ90 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC24.81■■□□□ 1.56
SPG7Q9UQ90 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC24.81■■□□□ 1.56
SPG7Q9UQ90 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
SPG7Q9UQ90 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
SPG7Q9UQ90 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
SPG7Q9UQ90 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
SPG7Q9UQ90 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
SPG7Q9UQ90 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
SPG7Q9UQ90 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC24.81■■□□□ 1.56
SPG7Q9UQ90 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC24.81■■□□□ 1.56
SPG7Q9UQ90 AC092329.2-201ENST00000598402 547 ntBASIC24.81■■□□□ 1.56
SPG7Q9UQ90 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
SPG7Q9UQ90 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC24.81■■□□□ 1.56
SPG7Q9UQ90 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC24.81■■□□□ 1.56
SPG7Q9UQ90 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
SPG7Q9UQ90 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
SPG7Q9UQ90 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC24.8■■□□□ 1.56
SPG7Q9UQ90 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
SPG7Q9UQ90 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC24.8■■□□□ 1.56
SPG7Q9UQ90 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
SPG7Q9UQ90 TSSC2-201ENST00000450217 709 ntBASIC24.8■■□□□ 1.56
SPG7Q9UQ90 BX276092.5-203ENST00000456199 560 ntBASIC24.8■■□□□ 1.56
SPG7Q9UQ90 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC24.8■■□□□ 1.56
SPG7Q9UQ90 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC24.8■■□□□ 1.56
SPG7Q9UQ90 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC24.8■■□□□ 1.56
SPG7Q9UQ90 AL121672.3-201ENST00000608644 468 ntBASIC24.8■■□□□ 1.56
SPG7Q9UQ90 AC112497.1-201ENST00000624824 639 ntBASIC24.8■■□□□ 1.56
SPG7Q9UQ90 VPS72-207ENST00000640458 689 ntTSL 5 BASIC24.8■■□□□ 1.56
SPG7Q9UQ90 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
SPG7Q9UQ90 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
SPG7Q9UQ90 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
SPG7Q9UQ90 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
SPG7Q9UQ90 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC24.8■■□□□ 1.56
SPG7Q9UQ90 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC24.79■■□□□ 1.56
SPG7Q9UQ90 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
SPG7Q9UQ90 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC24.79■■□□□ 1.56
SPG7Q9UQ90 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC24.79■■□□□ 1.56
SPG7Q9UQ90 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
SPG7Q9UQ90 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
SPG7Q9UQ90 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC24.79■■□□□ 1.56
SPG7Q9UQ90 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC24.79■■□□□ 1.56
SPG7Q9UQ90 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC24.79■■□□□ 1.56
SPG7Q9UQ90 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC24.79■■□□□ 1.56
SPG7Q9UQ90 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC24.79■■□□□ 1.56
SPG7Q9UQ90 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC24.79■■□□□ 1.56
SPG7Q9UQ90 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
SPG7Q9UQ90 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC24.79■■□□□ 1.56
SPG7Q9UQ90 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC24.79■■□□□ 1.56
SPG7Q9UQ90 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
SPG7Q9UQ90 AC016734.2-201ENST00000624325 1377 ntBASIC24.79■■□□□ 1.56
SPG7Q9UQ90 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC24.78■■□□□ 1.56
SPG7Q9UQ90 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC24.78■■□□□ 1.56
SPG7Q9UQ90 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
SPG7Q9UQ90 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC24.78■■□□□ 1.56
SPG7Q9UQ90 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
SPG7Q9UQ90 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC24.78■■□□□ 1.56
SPG7Q9UQ90 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
SPG7Q9UQ90 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC24.78■■□□□ 1.56
SPG7Q9UQ90 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
SPG7Q9UQ90 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC24.78■■□□□ 1.56
SPG7Q9UQ90 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC24.78■■□□□ 1.56
SPG7Q9UQ90 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC24.78■■□□□ 1.56
SPG7Q9UQ90 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC24.78■■□□□ 1.56
SPG7Q9UQ90 MIR3652-201ENST00000579335 131 ntBASIC24.78■■□□□ 1.56
SPG7Q9UQ90 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC24.78■■□□□ 1.56
SPG7Q9UQ90 AC079602.3-201ENST00000623931 403 ntBASIC24.78■■□□□ 1.56
SPG7Q9UQ90 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC24.78■■□□□ 1.56
SPG7Q9UQ90 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC24.78■■□□□ 1.56
SPG7Q9UQ90 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC24.77■■□□□ 1.56
SPG7Q9UQ90 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
SPG7Q9UQ90 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC24.77■■□□□ 1.56
SPG7Q9UQ90 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC24.77■■□□□ 1.56
SPG7Q9UQ90 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC24.77■■□□□ 1.56
SPG7Q9UQ90 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC24.77■■□□□ 1.56
SPG7Q9UQ90 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms